Wall clock time and date at job start Sun Mar 7 2021 14:25:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34222 * 117.00137 * 2 1 4 4 O 1.20833 * 119.99852 * 0.02562 * 3 2 1 5 5 C 1.50696 * 120.00432 * 179.71953 * 3 2 1 6 6 C 1.52996 * 109.47298 * 180.27351 * 5 3 2 7 7 H 1.08997 * 112.84579 * 43.81252 * 6 5 3 8 8 C 1.53785 * 113.61286 * 174.99945 * 6 5 3 9 9 C 1.53788 * 87.08050 * 139.98379 * 8 6 5 10 10 H 1.09003 * 113.61154 * 89.11637 * 9 8 6 11 11 N 1.46494 * 113.61401 * 220.02237 * 9 8 6 12 12 C 1.34781 * 119.99528 * 204.99795 * 11 9 8 13 13 O 1.21565 * 120.00159 * 0.02562 * 12 11 9 14 14 C 1.47726 * 119.99979 * 179.97438 * 12 11 9 15 15 C 1.39628 * 120.11959 * 179.72752 * 14 12 11 16 16 C 1.37856 * 119.87789 * 179.70031 * 15 14 12 17 17 C 1.50705 * 119.94240 * 180.27424 * 16 15 14 18 18 O 1.42902 * 109.47161 * 255.32902 * 17 16 15 19 19 Si 1.86296 * 109.47191 * 135.32141 * 17 16 15 20 20 C 1.38638 * 120.11806 * 0.60091 * 16 15 14 21 21 F 1.35103 * 119.87825 * 179.69657 * 20 16 15 22 22 C 1.38677 * 120.24148 * 359.67888 * 20 16 15 23 23 C 1.37814 * 120.11705 * 0.02562 * 22 20 16 24 24 C 1.53781 * 113.61738 * 272.49877 * 6 5 3 25 25 H 1.09007 * 109.47110 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.47380 * 299.99656 * 1 2 3 27 27 H 1.08997 * 109.47403 * 60.00337 * 1 2 3 28 28 H 1.09000 * 109.47190 * 300.28287 * 5 3 2 29 29 H 1.09006 * 109.46468 * 60.27870 * 5 3 2 30 30 H 1.08997 * 113.61684 * 254.53679 * 8 6 5 31 31 H 1.08999 * 113.61328 * 25.35468 * 8 6 5 32 32 H 0.97001 * 120.00364 * 25.00141 * 11 9 8 33 33 H 1.07997 * 120.05814 * 359.97438 * 15 14 12 34 34 H 1.09000 * 109.46522 * 15.32622 * 17 16 15 35 35 H 0.96698 * 113.99578 * 299.99432 * 18 17 16 36 36 H 1.48500 * 110.00157 * 180.02562 * 19 17 16 37 37 H 1.48498 * 110.00114 * 301.32713 * 19 17 16 38 38 H 1.07991 * 119.94159 * 180.02562 * 22 20 16 39 39 H 1.07998 * 120.06517 * 180.02562 * 23 22 20 40 40 H 1.08995 * 113.61698 * 334.56842 * 24 6 5 41 41 H 1.08995 * 113.61197 * 105.47474 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0064 6 6 4.0000 2.7420 0.0119 7 1 3.4220 3.3516 0.7065 8 6 5.5203 2.9345 0.1415 9 6 5.3850 4.0695 -0.8874 10 1 5.1856 5.0431 -0.4396 11 7 6.4724 4.1049 -1.8684 12 6 6.7851 5.2612 -2.4863 13 8 6.1652 6.2748 -2.2291 14 6 7.8819 5.2971 -3.4752 15 6 8.2043 6.4924 -4.1209 16 6 9.2328 6.5216 -5.0383 17 6 9.5860 7.8123 -5.7316 18 8 9.1028 7.7786 -7.0760 19 14 11.4367 8.0255 -5.7419 20 6 9.9385 5.3643 -5.3294 21 9 10.9416 5.3972 -6.2338 22 6 9.6187 4.1732 -4.6952 23 6 8.5963 4.1341 -3.7720 24 6 4.1215 3.3538 -1.3937 25 1 -0.3634 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 3.9524 0.7784 0.8966 29 1 3.9596 0.7831 -0.8834 30 1 5.8348 3.2746 1.1281 31 1 6.1002 2.0844 -0.2180 32 1 6.9673 3.2962 -2.0734 33 1 7.6517 7.3933 -3.8988 34 1 9.1271 8.6468 -5.2014 35 1 9.4699 7.0593 -7.6079 36 1 11.7980 9.2950 -6.4223 37 1 11.9552 8.0301 -4.3504 38 1 10.1719 3.2747 -4.9253 39 1 8.3483 3.2061 -3.2783 40 1 4.3191 2.6191 -2.1742 41 1 3.3070 4.0326 -1.6463 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_12496548.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:25:04 Heat of formation + Delta-G solvation = -142.639714 kcal Electronic energy + Delta-G solvation = -26478.315436 eV Core-core repulsion = 22240.430802 eV Total energy + Delta-G solvation = -4237.884634 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.125 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -50.49234 -41.80919 -41.34606 -40.28315 -39.13413 -37.67570 -37.41051 -35.02930 -33.00330 -32.24280 -31.33886 -28.48956 -27.05439 -26.86414 -25.77864 -23.92023 -23.56415 -21.89771 -21.57344 -20.66227 -19.26423 -18.75993 -18.54789 -18.12654 -17.85314 -17.66558 -17.52998 -17.12197 -16.91563 -16.32238 -16.21854 -15.99251 -15.57220 -15.35720 -15.15630 -14.96085 -14.57695 -14.46887 -14.16113 -14.01114 -13.96299 -13.69520 -13.48614 -13.45402 -13.03421 -12.99250 -12.85392 -12.37900 -12.24915 -11.98696 -11.93861 -11.78391 -11.51122 -11.38865 -11.07599 -10.67905 -10.25013 -10.16604 -9.92545 -4.84596 -0.60201 -0.11069 1.20216 1.21342 1.52939 1.66294 1.68728 1.94589 2.01539 2.49133 2.80667 3.19059 3.28027 3.31915 3.41937 3.45452 3.49665 3.60790 3.68868 3.77610 3.81583 3.99731 4.12932 4.15109 4.21058 4.23582 4.25866 4.37355 4.47261 4.50564 4.57867 4.63587 4.64809 4.68771 4.73067 4.86636 4.89050 4.98165 4.99127 5.15192 5.38716 5.43107 5.48713 6.33839 6.43696 6.74514 7.07805 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.140 4.140 9 C 0.123 3.877 10 H 0.120 0.880 11 N -0.715 5.715 12 C 0.561 3.439 13 O -0.529 6.529 14 C -0.143 4.143 15 C -0.013 4.013 16 C -0.154 4.154 17 C -0.069 4.069 18 O -0.533 6.533 19 Si 0.673 3.327 20 C 0.122 3.878 21 F -0.106 7.106 22 C -0.149 4.149 23 C -0.056 4.056 24 C -0.147 4.147 25 H 0.103 0.897 26 H 0.064 0.936 27 H 0.063 0.937 28 H 0.110 0.890 29 H 0.108 0.892 30 H 0.082 0.918 31 H 0.091 0.909 32 H 0.400 0.600 33 H 0.148 0.852 34 H 0.120 0.880 35 H 0.378 0.622 36 H -0.247 1.247 37 H -0.253 1.253 38 H 0.150 0.850 39 H 0.139 0.861 40 H 0.086 0.914 41 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.882 -8.358 0.546 8.857 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.178 4.178 9 C 0.019 3.981 10 H 0.138 0.862 11 N -0.367 5.367 12 C 0.349 3.651 13 O -0.405 6.405 14 C -0.146 4.146 15 C -0.032 4.032 16 C -0.155 4.155 17 C -0.180 4.180 18 O -0.338 6.338 19 Si 0.573 3.427 20 C 0.103 3.897 21 F -0.085 7.085 22 C -0.168 4.168 23 C -0.075 4.075 24 C -0.186 4.186 25 H 0.121 0.879 26 H 0.082 0.918 27 H 0.082 0.918 28 H 0.128 0.872 29 H 0.126 0.874 30 H 0.101 0.899 31 H 0.109 0.891 32 H 0.236 0.764 33 H 0.166 0.834 34 H 0.138 0.862 35 H 0.225 0.775 36 H -0.171 1.171 37 H -0.177 1.177 38 H 0.168 0.832 39 H 0.157 0.843 40 H 0.104 0.896 41 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 2.579 -6.295 1.168 6.902 hybrid contribution -0.488 -0.432 0.040 0.653 sum 2.092 -6.727 1.208 7.148 Atomic orbital electron populations 1.23302 0.75916 1.03941 1.02722 1.86501 1.23809 1.33536 1.84084 1.23813 0.92302 0.81404 0.72428 1.90702 1.67230 1.36306 1.44761 1.21403 0.87645 0.98841 1.06087 1.22252 0.96136 0.94199 0.99225 0.87360 1.23434 0.95780 0.98412 1.00136 1.22537 0.86290 1.00069 0.89243 0.86226 1.45874 1.36671 1.11236 1.42873 1.18158 0.82811 0.83548 0.80617 1.90825 1.52456 1.33481 1.63779 1.20033 0.99086 0.94865 1.00658 1.21065 0.92832 0.98117 0.91199 1.20368 0.98322 0.95645 1.01187 1.25032 1.12561 0.95589 0.84773 1.86565 1.71270 1.55478 1.20490 0.94620 0.76371 0.86808 0.84915 1.17773 0.87202 0.94616 0.90136 1.91185 1.57692 1.94956 1.64657 1.21081 0.99894 0.97351 0.98461 1.21185 0.93416 0.97520 0.95395 1.23570 0.98346 1.00189 0.96455 0.87907 0.91752 0.91775 0.87155 0.87433 0.89934 0.89062 0.76372 0.83388 0.86212 0.77483 1.17113 1.17749 0.83218 0.84316 0.89553 0.90282 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.29 10.56 -39.24 -0.41 -0.70 16 3 C 0.46 0.42 7.96 36.00 0.29 0.71 16 4 O -0.50 -2.08 15.51 -18.76 -0.29 -2.37 16 5 C -0.10 0.29 5.65 -27.89 -0.16 0.13 16 6 C -0.10 0.21 3.15 -89.81 -0.28 -0.07 16 7 H 0.11 -0.06 7.68 -51.93 -0.40 -0.46 16 8 C -0.14 0.52 7.39 -25.91 -0.19 0.32 16 9 C 0.12 -0.15 4.24 -67.12 -0.28 -0.44 16 10 H 0.12 0.10 7.47 -51.93 -0.39 -0.29 16 11 N -0.72 1.22 5.31 -53.99 -0.29 0.93 16 12 C 0.56 0.85 7.77 -12.38 -0.10 0.76 16 13 O -0.53 -3.01 15.94 5.31 0.08 -2.92 16 14 C -0.14 0.00 5.87 -104.96 -0.62 -0.61 16 15 C -0.01 -0.01 9.21 -39.20 -0.36 -0.37 16 16 C -0.15 -0.02 4.78 -104.61 -0.50 -0.52 16 17 C -0.07 -0.03 2.80 36.01 0.10 0.07 16 18 O -0.53 -0.60 12.88 -35.23 -0.45 -1.05 16 19 Si 0.67 0.19 29.57 -169.99 -5.03 -4.84 16 20 C 0.12 -0.15 6.63 -39.27 -0.26 -0.41 16 21 F -0.11 0.21 13.46 2.25 0.03 0.24 16 22 C -0.15 0.42 10.01 -39.57 -0.40 0.02 16 23 C -0.06 0.16 9.54 -39.20 -0.37 -0.21 16 24 C -0.15 0.17 7.43 -25.92 -0.19 -0.03 16 25 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 26 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 27 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 28 H 0.11 -0.49 8.14 -51.93 -0.42 -0.92 16 29 H 0.11 -0.48 7.84 -51.93 -0.41 -0.89 16 30 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 31 H 0.09 -0.50 8.08 -51.93 -0.42 -0.92 16 32 H 0.40 -1.95 6.76 -40.82 -0.28 -2.22 16 33 H 0.15 0.23 7.59 -52.49 -0.40 -0.17 16 34 H 0.12 0.06 7.77 -51.93 -0.40 -0.34 16 35 H 0.38 -0.93 8.41 45.56 0.38 -0.55 16 36 H -0.25 -0.76 7.11 56.52 0.40 -0.35 16 37 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 38 H 0.15 -0.77 8.06 -52.49 -0.42 -1.19 16 39 H 0.14 -0.86 6.40 -52.49 -0.34 -1.19 16 40 H 0.09 -0.19 7.90 -51.93 -0.41 -0.60 16 41 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 LS Contribution 353.19 15.07 5.32 5.32 Total: 0.00 -9.60 353.19 -8.50 -18.11 By element: Atomic # 1 Polarization: -7.89 SS G_CDS: -5.21 Total: -13.10 kcal Atomic # 6 Polarization: 2.63 SS G_CDS: -2.26 Total: 0.37 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.29 Total: 0.93 kcal Atomic # 8 Polarization: -5.97 SS G_CDS: -1.07 Total: -7.04 kcal Atomic # 9 Polarization: 0.21 SS G_CDS: 0.03 Total: 0.24 kcal Atomic # 14 Polarization: 0.19 SS G_CDS: -5.03 Total: -4.84 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -9.60 -8.50 -18.11 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_12496548.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.532 kcal (2) G-P(sol) polarization free energy of solvation -9.605 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.137 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.107 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.640 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds