Wall clock time and date at job start Sun Mar 7 2021 14:25:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34222 * 117.00137 * 2 1 4 4 O 1.20833 * 119.99852 * 0.02562 * 3 2 1 5 5 C 1.50696 * 120.00432 * 179.71953 * 3 2 1 6 6 C 1.52996 * 109.47298 * 180.27351 * 5 3 2 7 7 H 1.08997 * 112.84579 * 43.81252 * 6 5 3 8 8 C 1.53785 * 113.61286 * 174.99945 * 6 5 3 9 9 C 1.53788 * 87.08050 * 139.98379 * 8 6 5 10 10 H 1.09003 * 113.61154 * 89.11637 * 9 8 6 11 11 N 1.46494 * 113.61401 * 220.02237 * 9 8 6 12 12 C 1.34781 * 119.99528 * 204.99795 * 11 9 8 13 13 O 1.21565 * 120.00159 * 0.02562 * 12 11 9 14 14 C 1.47726 * 119.99979 * 179.97438 * 12 11 9 15 15 C 1.39628 * 120.11959 * 179.72752 * 14 12 11 16 16 C 1.37856 * 119.87789 * 179.70031 * 15 14 12 17 17 C 1.50705 * 119.94240 * 180.27424 * 16 15 14 18 18 O 1.42902 * 109.47161 * 255.32902 * 17 16 15 19 19 Si 1.86296 * 109.47191 * 135.32141 * 17 16 15 20 20 C 1.38638 * 120.11806 * 0.60091 * 16 15 14 21 21 F 1.35103 * 119.87825 * 179.69657 * 20 16 15 22 22 C 1.38677 * 120.24148 * 359.67888 * 20 16 15 23 23 C 1.37814 * 120.11705 * 0.02562 * 22 20 16 24 24 C 1.53781 * 113.61738 * 272.49877 * 6 5 3 25 25 H 1.09007 * 109.47110 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.47380 * 299.99656 * 1 2 3 27 27 H 1.08997 * 109.47403 * 60.00337 * 1 2 3 28 28 H 1.09000 * 109.47190 * 300.28287 * 5 3 2 29 29 H 1.09006 * 109.46468 * 60.27870 * 5 3 2 30 30 H 1.08997 * 113.61684 * 254.53679 * 8 6 5 31 31 H 1.08999 * 113.61328 * 25.35468 * 8 6 5 32 32 H 0.97001 * 120.00364 * 25.00141 * 11 9 8 33 33 H 1.07997 * 120.05814 * 359.97438 * 15 14 12 34 34 H 1.09000 * 109.46522 * 15.32622 * 17 16 15 35 35 H 0.96698 * 113.99578 * 299.99432 * 18 17 16 36 36 H 1.48500 * 110.00157 * 180.02562 * 19 17 16 37 37 H 1.48498 * 110.00114 * 301.32713 * 19 17 16 38 38 H 1.07991 * 119.94159 * 180.02562 * 22 20 16 39 39 H 1.07998 * 120.06517 * 180.02562 * 23 22 20 40 40 H 1.08995 * 113.61698 * 334.56842 * 24 6 5 41 41 H 1.08995 * 113.61197 * 105.47474 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0064 6 6 4.0000 2.7420 0.0119 7 1 3.4220 3.3516 0.7065 8 6 5.5203 2.9345 0.1415 9 6 5.3850 4.0695 -0.8874 10 1 5.1856 5.0431 -0.4396 11 7 6.4724 4.1049 -1.8684 12 6 6.7851 5.2612 -2.4863 13 8 6.1652 6.2748 -2.2291 14 6 7.8819 5.2971 -3.4752 15 6 8.2043 6.4924 -4.1209 16 6 9.2328 6.5216 -5.0383 17 6 9.5860 7.8123 -5.7316 18 8 9.1028 7.7786 -7.0760 19 14 11.4367 8.0255 -5.7419 20 6 9.9385 5.3643 -5.3294 21 9 10.9416 5.3972 -6.2338 22 6 9.6187 4.1732 -4.6952 23 6 8.5963 4.1341 -3.7720 24 6 4.1215 3.3538 -1.3937 25 1 -0.3634 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 3.9524 0.7784 0.8966 29 1 3.9596 0.7831 -0.8834 30 1 5.8348 3.2746 1.1281 31 1 6.1002 2.0844 -0.2180 32 1 6.9673 3.2962 -2.0734 33 1 7.6517 7.3933 -3.8988 34 1 9.1271 8.6468 -5.2014 35 1 9.4699 7.0593 -7.6079 36 1 11.7980 9.2950 -6.4223 37 1 11.9552 8.0301 -4.3504 38 1 10.1719 3.2747 -4.9253 39 1 8.3483 3.2061 -3.2783 40 1 4.3191 2.6191 -2.1742 41 1 3.3070 4.0326 -1.6463 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_12496548.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:25:03 Heat of formation + Delta-G solvation = -143.158551 kcal Electronic energy + Delta-G solvation = -26478.337934 eV Core-core repulsion = 22240.430802 eV Total energy + Delta-G solvation = -4237.907132 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.125 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -50.34700 -41.79724 -41.37338 -40.19660 -39.16172 -37.70240 -37.49330 -35.05672 -32.91877 -32.14778 -31.23032 -28.42148 -27.02669 -26.69027 -25.72933 -23.84622 -23.48817 -21.87084 -21.57652 -20.53003 -19.19349 -18.67298 -18.55119 -18.08077 -17.87074 -17.62746 -17.53660 -17.00445 -16.89632 -16.27079 -16.20360 -16.01683 -15.57990 -15.30207 -15.05064 -14.86346 -14.52042 -14.42772 -14.21529 -14.00021 -13.94834 -13.47380 -13.39517 -13.35578 -12.95698 -12.92301 -12.77634 -12.49529 -12.16997 -11.99166 -11.86811 -11.81317 -11.47931 -11.33733 -11.16854 -10.69193 -10.22519 -10.11509 -9.82656 -4.93105 -0.52153 0.00131 1.14464 1.18911 1.49159 1.59463 1.76914 1.85241 2.05350 2.54119 2.93115 3.25842 3.43189 3.48164 3.52089 3.55462 3.60734 3.77198 3.82853 3.90944 3.96197 4.08607 4.23308 4.26471 4.27775 4.32676 4.48668 4.61035 4.64902 4.69318 4.74566 4.75653 4.79508 4.87007 4.88798 4.98161 5.02459 5.08143 5.10596 5.24157 5.41779 5.56035 5.61775 6.44414 6.57143 6.72425 7.10722 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.453 3.547 4 O -0.546 6.546 5 C -0.095 4.095 6 C -0.099 4.099 7 H 0.083 0.917 8 C -0.115 4.115 9 C 0.114 3.886 10 H 0.088 0.912 11 N -0.694 5.694 12 C 0.556 3.444 13 O -0.585 6.585 14 C -0.156 4.156 15 C -0.035 4.035 16 C -0.166 4.166 17 C -0.076 4.076 18 O -0.550 6.550 19 Si 0.750 3.250 20 C 0.121 3.879 21 F -0.099 7.099 22 C -0.140 4.140 23 C -0.039 4.039 24 C -0.148 4.148 25 H 0.128 0.872 26 H 0.058 0.942 27 H 0.057 0.943 28 H 0.137 0.863 29 H 0.136 0.864 30 H 0.086 0.914 31 H 0.126 0.874 32 H 0.420 0.580 33 H 0.126 0.874 34 H 0.109 0.891 35 H 0.393 0.607 36 H -0.288 1.288 37 H -0.285 1.285 38 H 0.185 0.815 39 H 0.181 0.819 40 H 0.106 0.894 41 H 0.044 0.956 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.617 -12.174 0.418 13.027 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C 0.298 3.702 4 O -0.436 6.436 5 C -0.132 4.132 6 C -0.118 4.118 7 H 0.101 0.899 8 C -0.153 4.153 9 C 0.009 3.991 10 H 0.106 0.894 11 N -0.346 5.346 12 C 0.345 3.655 13 O -0.466 6.466 14 C -0.160 4.160 15 C -0.054 4.054 16 C -0.168 4.168 17 C -0.185 4.185 18 O -0.358 6.358 19 Si 0.654 3.346 20 C 0.102 3.898 21 F -0.078 7.078 22 C -0.158 4.158 23 C -0.058 4.058 24 C -0.187 4.187 25 H 0.146 0.854 26 H 0.077 0.923 27 H 0.076 0.924 28 H 0.154 0.846 29 H 0.154 0.846 30 H 0.105 0.895 31 H 0.145 0.855 32 H 0.260 0.740 33 H 0.143 0.857 34 H 0.127 0.873 35 H 0.242 0.758 36 H -0.215 1.215 37 H -0.211 1.211 38 H 0.202 0.798 39 H 0.198 0.802 40 H 0.124 0.876 41 H 0.062 0.938 Dipole moment (debyes) X Y Z Total from point charges 4.323 -10.196 1.031 11.122 hybrid contribution -1.071 0.767 0.074 1.320 sum 3.251 -9.429 1.106 10.035 Atomic orbital electron populations 1.23465 0.75444 1.05448 1.02151 1.86507 1.24475 1.33506 1.83812 1.24667 0.93802 0.80765 0.70985 1.90693 1.68440 1.37607 1.46881 1.21548 0.84744 0.98327 1.08562 1.22143 0.97298 0.94575 0.97756 0.89850 1.23370 0.94541 0.97944 0.99417 1.22497 0.86665 0.99723 0.90255 0.89401 1.45712 1.36104 1.11070 1.41723 1.18509 0.82745 0.83565 0.80707 1.90798 1.54525 1.35598 1.65706 1.20000 0.99447 0.95729 1.00776 1.20991 0.93637 0.98234 0.92554 1.20268 0.98899 0.96080 1.01521 1.25085 1.12771 0.95983 0.84710 1.86524 1.71808 1.56531 1.20893 0.93886 0.74596 0.84505 0.81565 1.17902 0.87007 0.94696 0.90224 1.91192 1.57332 1.94803 1.64451 1.21496 0.99452 0.97655 0.97193 1.21589 0.91994 0.97640 0.94540 1.23600 0.97162 1.00097 0.97798 0.85364 0.92344 0.92423 0.84553 0.84628 0.89538 0.85547 0.74034 0.85654 0.87304 0.75755 1.21533 1.21143 0.79771 0.80230 0.87582 0.93750 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.42 10.56 -51.34 -0.54 -0.96 16 3 C 0.45 0.86 7.96 71.23 0.57 1.42 16 4 O -0.55 -5.47 15.51 21.94 0.34 -5.13 16 5 C -0.09 0.72 5.65 29.85 0.17 0.88 16 6 C -0.10 0.45 3.15 -10.27 -0.03 0.41 16 7 H 0.08 0.06 7.68 -2.39 -0.02 0.04 16 8 C -0.11 1.07 7.39 31.12 0.23 1.30 16 9 C 0.11 -0.24 4.24 45.52 0.19 -0.04 16 10 H 0.09 0.41 7.47 -2.39 -0.02 0.39 16 11 N -0.69 2.91 5.31 -443.01 -2.35 0.56 16 12 C 0.56 2.32 7.77 86.75 0.67 3.00 16 13 O -0.59 -8.67 15.94 -3.92 -0.06 -8.73 16 14 C -0.16 -0.02 5.87 -20.09 -0.12 -0.14 16 15 C -0.03 -0.14 9.21 22.52 0.21 0.07 16 16 C -0.17 -0.19 4.78 -19.86 -0.09 -0.29 16 17 C -0.08 -0.20 2.80 71.24 0.20 0.00 16 18 O -0.55 -1.84 12.88 -148.98 -1.92 -3.76 16 19 Si 0.75 1.22 29.57 68.60 2.03 3.25 16 20 C 0.12 -0.46 6.63 22.47 0.15 -0.31 16 21 F -0.10 0.56 13.46 44.97 0.61 1.17 16 22 C -0.14 1.22 10.01 22.27 0.22 1.45 16 23 C -0.04 0.34 9.54 22.52 0.21 0.55 16 24 C -0.15 0.26 7.43 31.12 0.23 0.49 16 25 H 0.13 -0.91 8.14 -2.38 -0.02 -0.93 16 26 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 27 H 0.06 -0.01 8.13 -2.39 -0.02 -0.03 16 28 H 0.14 -1.67 8.14 -2.39 -0.02 -1.69 16 29 H 0.14 -1.72 7.84 -2.38 -0.02 -1.74 16 30 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 31 H 0.13 -2.01 8.08 -2.39 -0.02 -2.03 16 32 H 0.42 -5.42 6.76 -92.71 -0.63 -6.05 16 33 H 0.13 0.94 7.59 -2.91 -0.02 0.92 16 34 H 0.11 0.45 7.77 -2.39 -0.02 0.43 16 35 H 0.39 -1.85 8.41 -74.06 -0.62 -2.47 16 36 H -0.29 -2.36 7.11 99.48 0.71 -1.65 16 37 H -0.28 -1.92 7.11 99.48 0.71 -1.21 16 38 H 0.19 -2.83 8.06 -2.92 -0.02 -2.85 16 39 H 0.18 -3.12 6.40 -2.91 -0.02 -3.14 16 40 H 0.11 -0.63 7.90 -2.39 -0.02 -0.65 16 41 H 0.04 0.24 8.14 -2.39 -0.02 0.22 16 Total: 0.00 -28.89 353.19 1.98 -26.91 By element: Atomic # 1 Polarization: -23.13 SS G_CDS: -0.13 Total: -23.26 kcal Atomic # 6 Polarization: 5.95 SS G_CDS: 4.01 Total: 9.96 kcal Atomic # 7 Polarization: 2.91 SS G_CDS: -2.35 Total: 0.56 kcal Atomic # 8 Polarization: -16.40 SS G_CDS: -2.18 Total: -18.58 kcal Atomic # 9 Polarization: 0.56 SS G_CDS: 0.61 Total: 1.17 kcal Atomic # 14 Polarization: 1.22 SS G_CDS: 2.03 Total: 3.25 kcal Total: -28.89 1.98 -26.91 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_12496548.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.249 kcal (2) G-P(sol) polarization free energy of solvation -28.891 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.139 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.981 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.910 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.159 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds