Wall clock time and date at job start Sun Mar 7 2021 14:25:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34227 * 116.99483 * 2 1 4 4 O 1.20824 * 120.00576 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99485 * 179.97438 * 3 2 1 6 6 C 1.53010 * 109.47006 * 180.02562 * 5 3 2 7 7 H 1.08994 * 112.84618 * 316.19789 * 6 5 3 8 8 C 1.53946 * 113.74394 * 87.40189 * 6 5 3 9 9 C 1.53780 * 87.02044 * 139.94258 * 8 6 5 10 10 H 1.09004 * 113.61410 * 89.23252 * 9 8 6 11 11 N 1.46502 * 113.61601 * 220.04578 * 9 8 6 12 12 C 1.34776 * 120.00110 * 253.86395 * 11 9 8 13 13 O 1.21576 * 120.00115 * 0.27568 * 12 11 9 14 14 C 1.47666 * 119.99634 * 180.27621 * 12 11 9 15 15 C 1.40003 * 120.45868 * 353.98651 * 14 12 11 16 16 N 1.31303 * 121.37976 * 179.97438 * 15 14 12 17 17 C 1.32823 * 121.88869 * 0.02587 * 16 15 14 18 18 N 1.37159 * 132.96457 * 180.02562 * 17 16 15 19 19 C 1.36941 * 110.11434 * 179.97438 * 18 17 16 20 20 C 1.34176 * 109.95410 * 0.02562 * 19 18 17 21 21 C 1.50696 * 126.60363 * 180.02562 * 20 19 18 22 22 O 1.42902 * 109.47639 * 104.97334 * 21 20 19 23 23 Si 1.86300 * 109.47149 * 344.97107 * 21 20 19 24 24 C 1.41016 * 120.08291 * 359.97438 * 17 16 15 25 25 C 1.39277 * 119.61949 * 359.70211 * 24 17 16 26 26 C 1.50707 * 121.03252 * 180.29450 * 25 24 17 27 27 C 1.53777 * 87.17338 * 334.63972 * 9 8 6 28 28 H 1.08997 * 109.46947 * 299.99932 * 1 2 3 29 29 H 1.09004 * 109.46936 * 59.99991 * 1 2 3 30 30 H 1.08998 * 109.47111 * 180.02562 * 1 2 3 31 31 H 1.08996 * 109.47613 * 60.00467 * 5 3 2 32 32 H 1.09000 * 109.47543 * 300.00060 * 5 3 2 33 33 H 1.09010 * 113.61436 * 25.42554 * 8 6 5 34 34 H 1.08998 * 113.66897 * 254.47554 * 8 6 5 35 35 H 0.96998 * 119.99492 * 74.13885 * 11 9 8 36 36 H 1.08002 * 119.30958 * 359.97438 * 15 14 12 37 37 H 0.96997 * 124.94296 * 359.93673 * 18 17 16 38 38 H 1.08002 * 125.02595 * 180.02562 * 19 18 17 39 39 H 1.09004 * 109.47303 * 224.97488 * 21 20 19 40 40 H 0.96702 * 113.99662 * 300.00774 * 22 21 20 41 41 H 1.48500 * 110.00137 * 179.97438 * 23 21 20 42 42 H 1.48499 * 110.00034 * 301.32185 * 23 21 20 43 43 H 1.08998 * 109.47213 * 263.97790 * 26 25 24 44 44 H 1.08997 * 109.46561 * 23.97644 * 26 25 24 45 45 H 1.08998 * 109.47007 * 143.97182 * 26 25 24 46 46 H 1.09000 * 113.61835 * 139.93711 * 27 9 8 47 47 H 1.09008 * 113.61163 * 270.75977 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0001 2.7422 0.0011 7 1 3.4251 3.3537 -0.6942 8 6 4.1141 3.3544 1.4090 9 6 5.3807 4.0685 0.9086 10 1 5.1847 5.0430 0.4612 11 7 6.4636 4.1028 1.8947 12 6 6.7566 5.2525 2.5341 13 8 6.1191 6.2600 2.2962 14 6 7.8521 5.2884 3.5237 15 6 8.5094 4.1103 3.8977 16 7 9.4860 4.1213 4.7753 17 6 9.8988 5.2446 5.3516 18 7 10.8748 5.5171 6.2760 19 6 10.9043 6.8589 6.5481 20 6 9.9680 7.4932 5.8260 21 6 9.6756 8.9715 5.8342 22 8 10.1907 9.5657 4.6410 23 14 10.4841 9.7563 7.3178 24 6 9.2860 6.4724 5.0266 25 6 8.2514 6.4999 4.0946 26 6 7.5785 7.7950 3.7188 27 6 5.5209 2.9350 -0.1211 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 3.9564 0.7807 -0.8891 32 1 3.9557 0.7810 0.8908 33 1 4.3072 2.6194 2.1905 34 1 3.2991 4.0341 1.6579 35 1 6.9722 3.2990 2.0846 36 1 8.2070 3.1727 3.4551 37 1 11.4587 4.8556 6.6788 38 1 11.5811 7.3360 7.2414 39 1 8.5980 9.1285 5.8822 40 1 11.1462 9.4643 4.5321 41 1 10.2037 11.2145 7.3370 42 1 9.9803 9.1252 8.5640 43 1 6.6718 7.9186 4.3111 44 1 8.2560 8.6262 3.9138 45 1 7.3211 7.7767 2.6598 46 1 5.8400 3.2765 -1.1058 47 1 6.1005 2.0857 0.2407 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_12890568.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:25:20 Heat of formation + Delta-G solvation = -51.468657 kcal Electronic energy + Delta-G solvation = -31531.759645 eV Core-core repulsion = 27068.903120 eV Total energy + Delta-G solvation = -4462.856526 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.83321 -41.65098 -40.99686 -39.68374 -38.54220 -37.74811 -37.36314 -35.20621 -34.59745 -32.05230 -31.79087 -30.68235 -28.79228 -28.37170 -26.77428 -26.54839 -25.19873 -24.26853 -23.55963 -21.97615 -21.56038 -20.77872 -20.51527 -19.26202 -18.73920 -18.45492 -17.85425 -17.62413 -17.50319 -17.42421 -16.97532 -16.66276 -16.34740 -16.16525 -15.92292 -15.51688 -15.51056 -15.16887 -14.89253 -14.61773 -14.42790 -14.09114 -14.00304 -13.86546 -13.67177 -13.59447 -13.50973 -13.38631 -13.18483 -13.02961 -12.88229 -12.75592 -12.27713 -12.12546 -12.04653 -11.88463 -11.74118 -11.42304 -11.32256 -11.04387 -10.99834 -10.45726 -10.16867 -10.00253 -9.57042 -9.12673 -5.12880 -0.21118 -0.04244 1.24144 1.26325 1.38619 1.57283 1.65318 1.73810 1.94955 1.95474 2.16836 2.86847 3.27711 3.37884 3.41534 3.45104 3.52198 3.61502 3.66977 3.74776 3.77078 3.84032 3.88296 4.10317 4.18644 4.19744 4.25174 4.27759 4.29427 4.31858 4.44113 4.52331 4.60387 4.61904 4.67722 4.72138 4.75983 4.82546 4.96720 4.98073 5.07214 5.08820 5.20408 5.25689 5.43514 5.45768 5.53737 5.63162 5.79730 6.10660 6.51757 6.61091 6.79366 6.86479 7.28819 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.107 0.893 8 C -0.147 4.147 9 C 0.126 3.874 10 H 0.119 0.881 11 N -0.719 5.719 12 C 0.572 3.428 13 O -0.528 6.528 14 C -0.234 4.234 15 C 0.180 3.820 16 N -0.504 5.504 17 C 0.307 3.693 18 N -0.570 5.570 19 C 0.070 3.930 20 C -0.181 4.181 21 C -0.036 4.036 22 O -0.538 6.538 23 Si 0.687 3.313 24 C -0.149 4.149 25 C 0.085 3.915 26 C -0.134 4.134 27 C -0.140 4.140 28 H 0.063 0.937 29 H 0.064 0.936 30 H 0.102 0.898 31 H 0.110 0.890 32 H 0.108 0.892 33 H 0.085 0.915 34 H 0.077 0.923 35 H 0.399 0.601 36 H 0.162 0.838 37 H 0.425 0.575 38 H 0.186 0.814 39 H 0.116 0.884 40 H 0.378 0.622 41 H -0.252 1.252 42 H -0.255 1.255 43 H 0.080 0.920 44 H 0.084 0.916 45 H 0.098 0.902 46 H 0.081 0.919 47 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.761 -4.266 1.195 7.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.280 6.280 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.186 4.186 9 C 0.021 3.979 10 H 0.136 0.864 11 N -0.370 5.370 12 C 0.360 3.640 13 O -0.405 6.405 14 C -0.241 4.241 15 C 0.011 3.989 16 N -0.217 5.217 17 C 0.074 3.926 18 N -0.176 5.176 19 C -0.056 4.056 20 C -0.189 4.189 21 C -0.148 4.148 22 O -0.343 6.343 23 Si 0.588 3.412 24 C -0.156 4.156 25 C 0.076 3.924 26 C -0.189 4.189 27 C -0.178 4.178 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.121 0.879 31 H 0.128 0.872 32 H 0.126 0.874 33 H 0.104 0.896 34 H 0.096 0.904 35 H 0.234 0.766 36 H 0.179 0.821 37 H 0.264 0.736 38 H 0.203 0.797 39 H 0.133 0.867 40 H 0.225 0.775 41 H -0.177 1.177 42 H -0.180 1.180 43 H 0.098 0.902 44 H 0.103 0.897 45 H 0.117 0.883 46 H 0.100 0.900 47 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 4.881 -3.416 2.052 6.301 hybrid contribution -0.629 -0.555 -0.086 0.844 sum 4.251 -3.972 1.966 6.141 Atomic orbital electron populations 1.23297 0.75980 1.03904 1.02701 1.86507 1.23764 1.33576 1.84109 1.23832 0.92325 0.81378 0.72397 1.90697 1.67234 1.36301 1.44770 1.21409 0.87562 0.98931 1.06079 1.22282 0.96165 0.94097 0.99291 0.87442 1.23596 0.98443 1.00179 0.96343 1.22477 0.86390 0.99903 0.89114 0.86352 1.45877 1.36672 1.11976 1.42477 1.17910 0.82644 0.83254 0.80185 1.90764 1.51469 1.33146 1.65160 1.20459 1.03278 0.94911 1.05481 1.22493 0.88700 0.96885 0.90776 1.66432 1.15879 1.27800 1.11602 1.18496 0.91298 0.90203 0.92614 1.41507 1.31122 1.08401 1.36538 1.21724 1.00658 0.81895 1.01364 1.20680 1.00385 0.95607 1.02200 1.24462 1.03070 0.89420 0.97799 1.86518 1.27774 1.78149 1.41878 0.95314 0.89836 0.80469 0.75626 1.19479 1.00348 0.93746 1.02041 1.19934 0.89352 0.95297 0.87779 1.21272 1.00193 0.92785 1.04689 1.23427 0.95684 0.98538 1.00133 0.91800 0.91764 0.87941 0.87183 0.87425 0.89620 0.90375 0.76565 0.82115 0.73588 0.79714 0.86723 0.77469 1.17680 1.17976 0.90180 0.89740 0.88327 0.89992 0.89064 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.47 10.57 -39.25 -0.41 -0.89 16 3 C 0.46 0.67 7.96 36.01 0.29 0.96 16 4 O -0.50 -2.32 15.51 -18.75 -0.29 -2.61 16 5 C -0.10 0.22 5.65 -27.88 -0.16 0.06 16 6 C -0.10 0.14 3.15 -89.71 -0.28 -0.14 16 7 H 0.11 0.00 7.68 -51.93 -0.40 -0.40 16 8 C -0.15 0.06 7.45 -25.83 -0.19 -0.14 16 9 C 0.13 -0.06 4.21 -67.12 -0.28 -0.35 16 10 H 0.12 0.16 7.50 -51.93 -0.39 -0.23 16 11 N -0.72 0.40 5.31 -54.02 -0.29 0.12 16 12 C 0.57 1.56 7.72 -12.41 -0.10 1.46 16 13 O -0.53 -3.12 13.12 5.30 0.07 -3.05 16 14 C -0.23 -0.57 5.89 -104.82 -0.62 -1.19 16 15 C 0.18 0.17 10.67 -17.12 -0.18 -0.01 16 16 N -0.50 -1.26 10.37 -11.96 -0.12 -1.38 16 17 C 0.31 0.67 8.42 -155.71 -1.31 -0.64 16 18 N -0.57 0.64 6.04 -12.12 -0.07 0.57 16 19 C 0.07 -0.16 10.44 -16.70 -0.17 -0.34 16 20 C -0.18 -0.02 5.57 -102.73 -0.57 -0.59 16 21 C -0.04 0.02 1.88 36.00 0.07 0.09 16 22 O -0.54 0.08 11.64 -35.23 -0.41 -0.33 16 23 Si 0.69 -1.50 30.77 -169.99 -5.23 -6.73 16 24 C -0.15 -0.39 6.16 -105.13 -0.65 -1.04 16 25 C 0.08 0.29 5.98 -103.67 -0.62 -0.33 16 26 C -0.13 -0.46 8.45 36.01 0.30 -0.16 16 27 C -0.14 0.41 7.39 -25.92 -0.19 0.22 16 28 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 29 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 30 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 31 H 0.11 -0.42 8.14 -51.93 -0.42 -0.85 16 32 H 0.11 -0.40 7.86 -51.93 -0.41 -0.81 16 33 H 0.09 -0.11 7.91 -51.92 -0.41 -0.52 16 34 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 35 H 0.40 -1.35 6.79 -40.82 -0.28 -1.63 16 36 H 0.16 -0.45 6.43 -52.49 -0.34 -0.78 16 37 H 0.43 -1.58 8.96 -40.82 -0.37 -1.95 16 38 H 0.19 -1.18 6.36 -52.49 -0.33 -1.52 16 39 H 0.12 0.07 7.16 -51.93 -0.37 -0.30 16 40 H 0.38 -1.56 8.70 45.56 0.40 -1.16 16 41 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 42 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 43 H 0.08 0.29 8.14 -51.93 -0.42 -0.14 16 44 H 0.08 0.26 4.79 -51.93 -0.25 0.01 16 45 H 0.10 0.47 5.97 -51.93 -0.31 0.16 16 46 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 47 H 0.09 -0.42 8.07 -51.92 -0.42 -0.84 16 LS Contribution 386.19 15.07 5.82 5.82 Total: 0.00 -12.09 386.19 -10.57 -22.66 By element: Atomic # 1 Polarization: -7.08 SS G_CDS: -6.03 Total: -13.11 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: -3.60 Total: -1.07 kcal Atomic # 7 Polarization: -0.22 SS G_CDS: -0.48 Total: -0.70 kcal Atomic # 8 Polarization: -5.83 SS G_CDS: -1.05 Total: -6.87 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.23 Total: -6.73 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -12.09 -10.57 -22.66 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_12890568.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.806 kcal (2) G-P(sol) polarization free energy of solvation -12.090 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.897 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.572 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.662 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.469 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds