Wall clock time and date at job start Sun Mar 7 2021 14:25:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34231 * 116.99808 * 2 1 4 4 O 1.20824 * 120.00365 * 359.97438 * 3 2 1 5 5 C 1.50699 * 119.99919 * 180.02562 * 3 2 1 6 6 C 1.53004 * 109.47233 * 179.97438 * 5 3 2 7 7 H 1.08996 * 112.85143 * 316.19429 * 6 5 3 8 8 C 1.53784 * 113.68914 * 87.46472 * 6 5 3 9 9 C 1.53779 * 87.08350 * 139.99397 * 8 6 5 10 10 H 1.08998 * 113.69235 * 89.11994 * 9 8 6 11 11 N 1.46500 * 113.61264 * 220.02173 * 9 8 6 12 12 C 1.34782 * 119.99621 * 252.49276 * 11 9 8 13 13 O 1.21279 * 119.99885 * 0.02562 * 12 11 9 14 14 C 1.50699 * 119.99962 * 180.02562 * 12 11 9 15 15 C 1.50696 * 109.46899 * 179.97438 * 14 12 11 16 16 C 1.38285 * 119.93118 * 90.00096 * 15 14 12 17 17 C 1.38119 * 120.06331 * 180.02562 * 16 15 14 18 18 C 1.38830 * 119.93792 * 359.97438 * 17 16 15 19 19 N 1.40202 * 120.06899 * 179.97438 * 18 17 16 20 20 C 1.36562 * 125.66964 * 235.81491 * 19 18 17 21 21 C 1.34849 * 108.19792 * 180.14545 * 20 19 18 22 22 C 1.40939 * 107.47155 * 359.63582 * 21 20 19 23 23 C 1.34851 * 107.46486 * 0.22489 * 22 21 20 24 24 C 1.50702 * 125.89826 * 180.02562 * 23 22 21 25 25 O 1.42909 * 109.46778 * 217.29209 * 24 23 22 26 26 Si 1.86298 * 109.47166 * 337.29048 * 24 23 22 27 27 C 1.38828 * 119.86406 * 0.27080 * 18 17 16 28 28 C 1.38126 * 119.93722 * 359.49659 * 27 18 17 29 29 C 1.53784 * 113.61567 * 184.99672 * 6 5 3 30 30 H 1.09003 * 109.46764 * 180.02562 * 1 2 3 31 31 H 1.08998 * 109.47340 * 300.00325 * 1 2 3 32 32 H 1.08999 * 109.46952 * 60.00502 * 1 2 3 33 33 H 1.09001 * 109.47800 * 59.99395 * 5 3 2 34 34 H 1.09006 * 109.47325 * 299.99595 * 5 3 2 35 35 H 1.09001 * 113.61890 * 25.44095 * 8 6 5 36 36 H 1.09000 * 113.61248 * 254.54075 * 8 6 5 37 37 H 0.96995 * 120.00503 * 72.49688 * 11 9 8 38 38 H 1.08997 * 109.46816 * 60.00313 * 14 12 11 39 39 H 1.08999 * 109.47088 * 299.99994 * 14 12 11 40 40 H 1.07995 * 119.96878 * 0.02562 * 16 15 14 41 41 H 1.07998 * 120.03268 * 179.97438 * 17 16 15 42 42 H 1.07999 * 125.90259 * 0.02562 * 20 19 18 43 43 H 1.08005 * 126.26426 * 179.90015 * 21 20 19 44 44 H 1.08004 * 126.26889 * 180.20985 * 22 21 20 45 45 H 1.08996 * 109.47231 * 97.29015 * 24 23 22 46 46 H 0.96696 * 113.99860 * 65.50601 * 25 24 23 47 47 H 1.48504 * 110.00272 * 180.02562 * 26 24 23 48 48 H 1.48506 * 110.00070 * 301.32057 * 26 24 23 49 49 H 1.08007 * 120.03013 * 179.72676 * 27 18 17 50 50 H 1.07992 * 119.96736 * 180.25475 * 28 27 18 51 51 H 1.09001 * 113.60876 * 105.38826 * 29 6 5 52 52 H 1.08997 * 113.68983 * 334.49639 * 29 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0001 2.7422 -0.0011 7 1 3.4247 3.3534 -0.6963 8 6 4.1161 3.3527 1.4056 9 6 5.3814 4.0690 0.9049 10 1 5.1850 5.0432 0.4571 11 7 6.4649 4.1036 1.8902 12 6 6.7751 5.2593 2.5104 13 8 6.1569 6.2705 2.2530 14 6 7.8901 5.2951 3.5236 15 6 8.0328 6.6945 4.0641 16 6 7.3154 7.0789 5.1821 17 6 7.4437 8.3610 5.6796 18 6 8.2943 9.2640 5.0564 19 7 8.4262 10.5663 5.5588 20 6 8.2193 11.7168 4.8528 21 6 8.4463 12.7617 5.6745 22 6 8.7982 12.2397 6.9355 23 6 8.7782 10.8949 6.8368 24 6 9.0898 9.9228 7.9453 25 8 9.7950 8.8007 7.4106 26 14 10.1440 10.7637 9.2307 27 6 9.0093 8.8768 3.9312 28 6 8.8806 7.5918 3.4411 29 6 5.5208 2.9349 -0.1244 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5139 0.8899 32 1 -0.3633 0.5138 -0.8900 33 1 3.9558 0.7809 -0.8907 34 1 3.9564 0.7807 0.8892 35 1 4.3106 2.6172 2.1862 36 1 3.3004 4.0311 1.6557 37 1 6.9591 3.2948 2.0963 38 1 8.8231 4.9929 3.0479 39 1 7.6606 4.6112 4.3407 40 1 6.6542 6.3759 5.6667 41 1 6.8829 8.6607 6.5525 42 1 7.9264 11.7792 3.8152 43 1 8.3682 13.8072 5.4151 44 1 9.0400 12.8119 7.8190 45 1 8.1606 9.5835 8.4029 46 1 10.6709 9.0164 7.0622 47 1 10.4588 9.8153 10.3292 48 1 11.4001 11.2592 8.6125 49 1 9.6685 9.5785 3.4417 50 1 9.4397 7.2889 2.5683 51 1 5.8391 3.2761 -1.1096 52 1 6.1006 2.0858 0.2373 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_13287746.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:25:52 Heat of formation + Delta-G solvation = -43.765025 kcal Electronic energy + Delta-G solvation = -34184.405204 eV Core-core repulsion = 29503.544885 eV Total energy + Delta-G solvation = -4680.860319 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.177 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -42.56899 -41.71364 -41.10257 -40.07954 -39.09313 -37.74399 -37.40707 -34.81537 -34.74682 -32.10736 -32.06086 -31.32057 -30.94459 -28.56149 -27.77940 -26.83703 -25.97033 -24.69787 -23.88897 -23.14915 -21.87058 -21.53628 -21.30444 -20.62113 -20.48678 -19.19753 -18.58071 -18.05969 -17.93895 -17.55045 -17.46723 -17.16285 -17.00489 -16.45110 -16.22572 -16.15409 -15.77481 -15.73252 -15.19500 -14.99536 -14.98036 -14.57145 -14.49166 -14.44036 -14.28326 -14.08088 -13.91966 -13.82592 -13.66602 -13.47053 -13.25917 -13.19101 -13.09092 -12.98502 -12.81294 -12.62616 -12.22060 -12.18552 -12.05621 -11.94496 -11.77963 -11.77273 -11.48491 -11.37478 -10.89737 -10.82837 -10.13995 -10.05638 -9.90735 -9.11743 -8.94723 -4.90705 0.09560 0.43609 1.12699 1.21924 1.45764 1.62622 1.68851 1.70087 1.89203 2.09526 2.13790 2.21120 2.77841 3.31026 3.31383 3.34740 3.57235 3.61671 3.69267 3.74837 3.77891 3.83143 3.90691 3.95337 4.14787 4.15470 4.18611 4.22288 4.24238 4.26872 4.31412 4.38814 4.42560 4.52481 4.53284 4.56027 4.58465 4.64804 4.66321 4.70059 4.74125 4.89581 4.91293 5.00507 5.01486 5.20488 5.27361 5.29945 5.35172 5.41004 5.47368 5.51214 5.54929 5.84041 6.03684 6.28568 6.42604 6.44697 6.62532 6.75103 7.22128 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.100 4.100 7 H 0.107 0.893 8 C -0.147 4.147 9 C 0.124 3.876 10 H 0.117 0.883 11 N -0.723 5.723 12 C 0.515 3.485 13 O -0.526 6.526 14 C -0.104 4.104 15 C -0.063 4.063 16 C -0.088 4.088 17 C -0.092 4.092 18 C 0.130 3.870 19 N -0.391 5.391 20 C -0.004 4.004 21 C -0.190 4.190 22 C -0.186 4.186 23 C -0.013 4.013 24 C -0.052 4.052 25 O -0.526 6.526 26 Si 0.710 3.290 27 C -0.116 4.116 28 C -0.091 4.091 29 C -0.140 4.140 30 H 0.103 0.897 31 H 0.063 0.937 32 H 0.064 0.936 33 H 0.110 0.890 34 H 0.107 0.893 35 H 0.085 0.915 36 H 0.077 0.923 37 H 0.401 0.599 38 H 0.106 0.894 39 H 0.106 0.894 40 H 0.127 0.873 41 H 0.124 0.876 42 H 0.163 0.837 43 H 0.142 0.858 44 H 0.147 0.853 45 H 0.115 0.885 46 H 0.373 0.627 47 H -0.256 1.256 48 H -0.257 1.257 49 H 0.127 0.873 50 H 0.127 0.873 51 H 0.080 0.920 52 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.140 -5.199 -0.166 5.624 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.125 0.875 8 C -0.185 4.185 9 C 0.019 3.981 10 H 0.135 0.865 11 N -0.375 5.375 12 C 0.301 3.699 13 O -0.401 6.401 14 C -0.144 4.144 15 C -0.064 4.064 16 C -0.107 4.107 17 C -0.111 4.111 18 C 0.041 3.959 19 N -0.064 5.064 20 C -0.132 4.132 21 C -0.215 4.215 22 C -0.210 4.210 23 C -0.122 4.122 24 C -0.161 4.161 25 O -0.331 6.331 26 Si 0.609 3.391 27 C -0.135 4.135 28 C -0.110 4.110 29 C -0.178 4.178 30 H 0.121 0.879 31 H 0.082 0.918 32 H 0.082 0.918 33 H 0.128 0.872 34 H 0.126 0.874 35 H 0.104 0.896 36 H 0.095 0.905 37 H 0.236 0.764 38 H 0.124 0.876 39 H 0.124 0.876 40 H 0.145 0.855 41 H 0.142 0.858 42 H 0.181 0.819 43 H 0.160 0.840 44 H 0.165 0.835 45 H 0.133 0.867 46 H 0.220 0.780 47 H -0.181 1.181 48 H -0.181 1.181 49 H 0.145 0.855 50 H 0.145 0.855 51 H 0.099 0.901 52 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 1.656 -4.765 0.135 5.046 hybrid contribution 0.425 -0.921 -0.896 1.353 sum 2.081 -5.685 -0.761 6.102 Atomic orbital electron populations 1.23302 0.75932 1.03936 1.02718 1.86505 1.23801 1.33540 1.84094 1.23821 0.92309 0.81395 0.72413 1.90699 1.67236 1.36309 1.44767 1.21405 0.87611 0.98879 1.06070 1.22254 0.96180 0.94144 0.99266 0.87462 1.23557 0.98455 1.00150 0.96386 1.22466 0.86582 0.99771 0.89313 0.86522 1.45999 1.37023 1.11564 1.42882 1.20604 0.84397 0.83272 0.81660 1.90763 1.52329 1.33498 1.63556 1.20694 0.98852 0.96004 0.98800 1.19272 0.97083 0.94534 0.95481 1.20809 0.98445 0.95605 0.95826 1.20897 0.96992 0.93287 0.99958 1.17604 0.98537 0.83610 0.96176 1.41425 1.51983 1.03740 1.09272 1.22028 1.08611 0.83871 0.98720 1.20926 1.08489 0.98442 0.93594 1.20674 1.09432 0.91988 0.98932 1.21000 1.09826 0.95188 0.86232 1.24741 1.02773 0.89921 0.98700 1.86615 1.33359 1.32637 1.80524 0.94452 0.81180 0.84851 0.78631 1.20988 0.99385 0.96767 0.96406 1.20789 0.98475 0.92504 0.99192 1.23427 0.95691 0.98548 1.00115 0.87907 0.91783 0.91752 0.87184 0.87443 0.89639 0.90465 0.76420 0.87613 0.87613 0.85542 0.85765 0.81931 0.83989 0.83535 0.86689 0.77980 1.18097 1.18138 0.85529 0.85484 0.90104 0.89094 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.38 10.57 -39.26 -0.41 -0.79 16 3 C 0.46 0.56 7.96 36.01 0.29 0.85 16 4 O -0.50 -2.22 15.51 -18.75 -0.29 -2.51 16 5 C -0.10 0.25 5.65 -27.88 -0.16 0.09 16 6 C -0.10 0.17 3.15 -89.80 -0.28 -0.11 16 7 H 0.11 -0.01 7.68 -51.93 -0.40 -0.41 16 8 C -0.15 0.11 7.43 -25.92 -0.19 -0.08 16 9 C 0.12 -0.12 4.24 -67.12 -0.28 -0.40 16 10 H 0.12 0.16 7.46 -51.93 -0.39 -0.23 16 11 N -0.72 1.36 5.35 -53.02 -0.28 1.07 16 12 C 0.51 0.41 7.82 -10.98 -0.09 0.33 16 13 O -0.53 -2.95 15.63 5.56 0.09 -2.86 16 14 C -0.10 0.18 5.83 -29.04 -0.17 0.01 16 15 C -0.06 -0.07 4.37 -104.59 -0.46 -0.53 16 16 C -0.09 -0.17 9.69 -39.61 -0.38 -0.55 16 17 C -0.09 -0.26 8.48 -39.41 -0.33 -0.60 16 18 C 0.13 0.40 4.69 -83.59 -0.39 0.01 16 19 N -0.39 -1.23 2.84 -56.73 -0.16 -1.39 16 20 C 0.00 -0.01 11.20 -16.65 -0.19 -0.20 16 21 C -0.19 -0.42 10.86 -39.76 -0.43 -0.85 16 22 C -0.19 -0.33 9.40 -39.76 -0.37 -0.70 16 23 C -0.01 -0.03 6.12 -81.68 -0.50 -0.53 16 24 C -0.05 -0.04 2.49 36.01 0.09 0.05 16 25 O -0.53 -0.98 10.89 -35.23 -0.38 -1.36 16 26 Si 0.71 -0.28 30.82 -169.99 -5.24 -5.52 16 27 C -0.12 -0.25 9.76 -39.40 -0.38 -0.63 16 28 C -0.09 -0.12 9.69 -39.61 -0.38 -0.51 16 29 C -0.14 0.46 7.39 -25.92 -0.19 0.26 16 30 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 31 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 32 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 33 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 34 H 0.11 -0.44 7.85 -51.93 -0.41 -0.85 16 35 H 0.09 -0.16 7.90 -51.93 -0.41 -0.57 16 36 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 37 H 0.40 -1.99 8.73 -40.82 -0.36 -2.34 16 38 H 0.11 -0.41 8.08 -51.93 -0.42 -0.83 16 39 H 0.11 -0.39 8.08 -51.93 -0.42 -0.81 16 40 H 0.13 0.04 8.06 -52.49 -0.42 -0.39 16 41 H 0.12 0.31 8.05 -52.49 -0.42 -0.11 16 42 H 0.16 0.18 8.06 -52.49 -0.42 -0.24 16 43 H 0.14 0.07 8.06 -52.48 -0.42 -0.36 16 44 H 0.15 -0.11 6.62 -52.48 -0.35 -0.46 16 45 H 0.12 0.02 7.96 -51.93 -0.41 -0.39 16 46 H 0.37 -0.01 8.60 45.56 0.39 0.38 16 47 H -0.26 -0.60 7.11 56.52 0.40 -0.19 16 48 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 49 H 0.13 0.15 8.06 -52.48 -0.42 -0.28 16 50 H 0.13 -0.07 8.06 -52.49 -0.42 -0.49 16 51 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 52 H 0.09 -0.45 8.08 -51.93 -0.42 -0.87 16 LS Contribution 436.83 15.07 6.58 6.58 Total: 0.00 -11.20 436.83 -11.71 -22.91 By element: Atomic # 1 Polarization: -5.22 SS G_CDS: -7.86 Total: -13.08 kcal Atomic # 6 Polarization: 0.69 SS G_CDS: -3.75 Total: -3.06 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: -0.45 Total: -0.31 kcal Atomic # 8 Polarization: -6.52 SS G_CDS: -1.00 Total: -7.52 kcal Atomic # 14 Polarization: -0.28 SS G_CDS: -5.24 Total: -5.52 kcal Total LS contribution 6.58 Total: 6.58 kcal Total: -11.20 -11.71 -22.91 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_13287746.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.856 kcal (2) G-P(sol) polarization free energy of solvation -11.198 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.054 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.711 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.909 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.765 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds