Wall clock time and date at job start Sun Mar 7 2021 14:25:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34224 * 117.00314 * 2 1 4 4 O 1.20823 * 120.00134 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00045 * 180.02562 * 3 2 1 6 6 C 1.53001 * 109.47329 * 179.97438 * 5 3 2 7 7 H 1.08997 * 112.90473 * 43.74810 * 6 5 3 8 8 C 1.53786 * 113.61599 * 174.99977 * 6 5 3 9 9 C 1.53774 * 87.07988 * 139.98184 * 8 6 5 10 10 H 1.09000 * 113.61294 * 89.20015 * 9 8 6 11 11 N 1.46507 * 113.61551 * 220.01786 * 9 8 6 12 12 C 1.34771 * 119.99888 * 203.47284 * 11 9 8 13 13 O 1.21609 * 120.00598 * 359.97438 * 12 11 9 14 14 C 1.47388 * 119.99685 * 179.97438 * 12 11 9 15 15 C 1.36409 * 127.19055 * 179.97438 * 14 12 11 16 16 C 1.50702 * 125.80578 * 359.96014 * 15 14 12 17 17 O 1.33652 * 108.39616 * 179.97438 * 15 14 12 18 18 C 1.34213 * 110.90944 * 0.02562 * 17 15 14 19 19 C 1.50696 * 125.44073 * 179.97438 * 18 17 15 20 20 O 1.42903 * 109.47131 * 120.01975 * 19 18 17 21 21 Si 1.86305 * 109.47185 * 0.02562 * 19 18 17 22 22 C 1.34183 * 109.12308 * 0.26362 * 18 17 15 23 23 C 1.53775 * 87.17618 * 334.60971 * 9 8 6 24 24 H 1.09001 * 109.46739 * 300.00148 * 1 2 3 25 25 H 1.09004 * 109.46915 * 59.99318 * 1 2 3 26 26 H 1.08991 * 109.47505 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.46930 * 59.99938 * 5 3 2 28 28 H 1.09002 * 109.47592 * 300.00188 * 5 3 2 29 29 H 1.08998 * 113.61003 * 25.43121 * 8 6 5 30 30 H 1.08993 * 113.61404 * 254.53038 * 8 6 5 31 31 H 0.97000 * 119.99263 * 23.47131 * 11 9 8 32 32 H 1.08999 * 109.47393 * 180.02562 * 16 15 14 33 33 H 1.09001 * 109.46904 * 300.00094 * 16 15 14 34 34 H 1.08992 * 109.46996 * 59.99629 * 16 15 14 35 35 H 1.08999 * 109.47358 * 240.02335 * 19 18 17 36 36 H 0.96700 * 114.00311 * 300.00591 * 20 19 18 37 37 H 1.48499 * 109.99670 * 58.67633 * 21 19 18 38 38 H 1.48497 * 110.00233 * 179.97438 * 21 19 18 39 39 H 1.07997 * 127.02182 * 179.70527 * 22 18 17 40 40 H 1.09005 * 113.61698 * 139.94219 * 23 9 8 41 41 H 1.09004 * 113.61484 * 270.84274 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4035 2.2093 0.0005 5 6 3.5664 1.2747 -0.0006 6 6 4.0003 2.7419 -0.0011 7 1 3.4254 3.3546 0.6932 8 6 5.5211 2.9346 0.1211 9 6 5.3814 4.0666 -0.9102 10 1 5.1854 5.0417 -0.4643 11 7 6.4644 4.0993 -1.8963 12 6 6.7541 5.2466 -2.5413 13 8 6.1163 6.2547 -2.3052 14 6 7.8441 5.2795 -3.5328 15 6 8.2594 6.3520 -4.2664 16 6 7.6750 7.7399 -4.2076 17 8 9.2725 5.9628 -5.0463 18 6 9.5491 4.6628 -4.8591 19 6 10.6284 3.8879 -5.5700 20 8 11.5534 3.3706 -4.6115 21 14 11.5248 5.0139 -6.7530 22 6 8.7069 4.1618 -3.9424 23 6 4.1147 3.3521 -1.4099 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5140 -0.8900 26 1 -0.3634 -1.0276 -0.0005 27 1 3.9557 0.7807 -0.8908 28 1 3.9565 0.7804 0.8891 29 1 6.0993 2.0840 -0.2398 30 1 5.8401 3.2775 1.1053 31 1 6.9729 3.2950 -2.0848 32 1 8.2070 8.3880 -4.9040 33 1 6.6204 7.7019 -4.4805 34 1 7.7745 8.1334 -3.1961 35 1 10.1791 3.0632 -6.1233 36 1 11.9920 4.0502 -4.0815 37 1 12.1148 6.1596 -6.0151 38 1 12.5923 4.2618 -7.4600 39 1 8.6716 3.1457 -3.5784 40 1 3.2999 4.0316 -1.6600 41 1 4.3078 2.6158 -2.1902 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_13308374.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:25:58 Heat of formation + Delta-G solvation = -114.197020 kcal Electronic energy + Delta-G solvation = -25153.079506 eV Core-core repulsion = 21195.426164 eV Total energy + Delta-G solvation = -3957.653342 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -43.73590 -41.64344 -40.79942 -39.25227 -38.21879 -37.37759 -34.85079 -33.98887 -33.11281 -31.57751 -29.44943 -28.44320 -26.79661 -26.16606 -24.93469 -23.63913 -22.28318 -21.49334 -21.13190 -20.23136 -18.99603 -18.51449 -17.96748 -17.79848 -17.69624 -17.50537 -16.89967 -16.77099 -16.16992 -16.03064 -15.87399 -15.61052 -14.85348 -14.79168 -14.48133 -14.20827 -14.16479 -13.97481 -13.87946 -13.77444 -13.61364 -13.39669 -12.99916 -12.96716 -12.88195 -12.81507 -12.17911 -12.10764 -11.91858 -11.75417 -11.44513 -11.34138 -11.05441 -10.87039 -10.71612 -10.01539 -9.54959 -5.02357 0.31851 0.82895 1.09988 1.24852 1.41680 1.67170 1.72812 1.88419 2.23126 2.37445 3.06235 3.33289 3.35298 3.38669 3.64658 3.73113 3.77448 3.81341 3.86732 4.11342 4.17644 4.21069 4.24411 4.25767 4.30190 4.41297 4.42316 4.58256 4.59694 4.60720 4.63261 4.70366 4.73706 4.82132 4.95420 5.04911 5.10311 5.21175 5.25525 5.43935 5.56470 5.90035 6.17594 6.53638 6.77949 7.27607 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.140 4.140 9 C 0.125 3.875 10 H 0.118 0.882 11 N -0.715 5.715 12 C 0.592 3.408 13 O -0.538 6.538 14 C -0.254 4.254 15 C 0.095 3.905 16 C -0.078 4.078 17 O -0.167 6.167 18 C -0.055 4.055 19 C -0.034 4.034 20 O -0.521 6.521 21 Si 0.702 3.298 22 C -0.148 4.148 23 C -0.146 4.146 24 H 0.064 0.936 25 H 0.063 0.937 26 H 0.102 0.898 27 H 0.107 0.893 28 H 0.110 0.890 29 H 0.090 0.910 30 H 0.081 0.919 31 H 0.401 0.599 32 H 0.080 0.920 33 H 0.099 0.901 34 H 0.098 0.902 35 H 0.137 0.863 36 H 0.381 0.619 37 H -0.256 1.256 38 H -0.249 1.249 39 H 0.158 0.842 40 H 0.078 0.922 41 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.201 -3.232 -1.155 3.636 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.178 4.178 9 C 0.021 3.979 10 H 0.136 0.864 11 N -0.365 5.365 12 C 0.381 3.619 13 O -0.416 6.416 14 C -0.259 4.259 15 C 0.042 3.958 16 C -0.134 4.134 17 O -0.065 6.065 18 C -0.104 4.104 19 C -0.143 4.143 20 O -0.328 6.328 21 Si 0.601 3.399 22 C -0.167 4.167 23 C -0.185 4.185 24 H 0.082 0.918 25 H 0.082 0.918 26 H 0.121 0.879 27 H 0.126 0.874 28 H 0.128 0.872 29 H 0.109 0.891 30 H 0.100 0.900 31 H 0.236 0.764 32 H 0.099 0.901 33 H 0.118 0.882 34 H 0.116 0.884 35 H 0.155 0.845 36 H 0.229 0.771 37 H -0.180 1.180 38 H -0.173 1.173 39 H 0.175 0.825 40 H 0.097 0.903 41 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 1.256 -2.242 -1.658 3.058 hybrid contribution 0.287 -0.743 1.190 1.432 sum 1.543 -2.985 -0.468 3.393 Atomic orbital electron populations 1.23297 0.75961 1.03912 1.02706 1.86504 1.23776 1.33562 1.84096 1.23818 0.92299 0.81386 0.72395 1.90695 1.67232 1.36299 1.44785 1.21406 0.87602 0.98908 1.06073 1.22282 0.96120 0.94127 0.99268 0.87411 1.23421 0.95728 0.98545 1.00082 1.22479 0.86447 0.99866 0.89152 0.86413 1.45752 1.36544 1.12156 1.42038 1.17207 0.81768 0.83234 0.79691 1.90801 1.51833 1.33644 1.65341 1.21153 1.03923 0.94546 1.06230 1.22919 0.86817 0.96968 0.89140 1.20563 1.01274 0.86868 1.04683 1.83681 1.43496 1.25805 1.53469 1.22549 1.02533 0.82021 1.03250 1.24332 0.90414 1.03352 0.96244 1.86659 1.57199 1.36611 1.52290 0.94362 0.83866 0.77934 0.83762 1.22570 0.95638 0.99458 0.99076 1.23594 0.98400 1.00181 0.96344 0.91766 0.91785 0.87934 0.87444 0.87191 0.89130 0.90015 0.76444 0.90126 0.88212 0.88356 0.84522 0.77068 1.18028 1.17277 0.82467 0.90347 0.89651 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.44 10.56 -39.24 -0.41 -0.86 16 3 C 0.46 0.65 7.96 36.01 0.29 0.94 16 4 O -0.50 -2.28 15.51 -18.75 -0.29 -2.57 16 5 C -0.10 0.21 5.65 -27.88 -0.16 0.06 16 6 C -0.10 0.14 3.15 -89.71 -0.28 -0.15 16 7 H 0.11 0.00 7.68 -51.93 -0.40 -0.40 16 8 C -0.14 0.37 7.39 -25.92 -0.19 0.18 16 9 C 0.13 -0.03 4.21 -67.12 -0.28 -0.32 16 10 H 0.12 0.18 7.50 -51.93 -0.39 -0.21 16 11 N -0.71 0.06 5.36 -54.11 -0.29 -0.23 16 12 C 0.59 1.65 7.81 -12.54 -0.10 1.55 16 13 O -0.54 -3.09 15.28 5.27 0.08 -3.01 16 14 C -0.25 -0.46 6.31 -103.27 -0.65 -1.11 16 15 C 0.09 0.15 7.37 -34.97 -0.26 -0.11 16 16 C -0.08 0.01 9.14 36.01 0.33 0.34 16 17 O -0.17 -0.18 8.89 7.66 0.07 -0.11 16 18 C -0.06 -0.01 6.20 -35.74 -0.22 -0.23 16 19 C -0.03 0.04 2.97 36.00 0.11 0.15 16 20 O -0.52 0.18 12.87 -35.23 -0.45 -0.27 16 21 Si 0.70 -0.96 32.09 -169.99 -5.45 -6.41 16 22 C -0.15 -0.02 10.46 -37.45 -0.39 -0.41 16 23 C -0.15 0.04 7.44 -25.83 -0.19 -0.15 16 24 H 0.06 -0.02 8.13 -51.93 -0.42 -0.45 16 25 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 26 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 27 H 0.11 -0.39 7.85 -51.93 -0.41 -0.80 16 28 H 0.11 -0.41 8.14 -51.93 -0.42 -0.84 16 29 H 0.09 -0.37 8.07 -51.93 -0.42 -0.79 16 30 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 31 H 0.40 -0.97 7.88 -40.82 -0.32 -1.30 16 32 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.10 0.01 8.08 -51.93 -0.42 -0.41 16 34 H 0.10 0.02 8.08 -51.93 -0.42 -0.40 16 35 H 0.14 -0.39 7.96 -51.93 -0.41 -0.80 16 36 H 0.38 -1.10 8.70 45.56 0.40 -0.71 16 37 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 38 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 39 H 0.16 -0.31 7.74 -52.49 -0.41 -0.71 16 40 H 0.08 0.14 8.14 -51.93 -0.42 -0.29 16 41 H 0.08 -0.09 7.90 -51.93 -0.41 -0.50 16 LS Contribution 355.83 15.07 5.36 5.36 Total: 0.00 -9.04 355.83 -8.10 -17.14 By element: Atomic # 1 Polarization: -5.06 SS G_CDS: -5.77 Total: -10.82 kcal Atomic # 6 Polarization: 2.73 SS G_CDS: -0.94 Total: 1.79 kcal Atomic # 7 Polarization: 0.06 SS G_CDS: -0.29 Total: -0.23 kcal Atomic # 8 Polarization: -5.81 SS G_CDS: -1.01 Total: -6.82 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.45 Total: -6.41 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -9.04 -8.10 -17.14 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_13308374.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.061 kcal (2) G-P(sol) polarization free energy of solvation -9.040 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.101 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.096 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.136 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.197 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds