Wall clock time and date at job start Sun Mar 7 2021 14:26:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34231 * 116.99983 * 2 1 4 4 O 1.20822 * 120.00142 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00053 * 180.02562 * 3 2 1 6 6 C 1.52999 * 109.47248 * 180.02562 * 5 3 2 7 7 H 1.08996 * 112.84904 * 316.19618 * 6 5 3 8 8 C 1.53789 * 113.61438 * 87.50222 * 6 5 3 9 9 C 1.53782 * 87.08138 * 139.98021 * 8 6 5 10 10 H 1.09005 * 113.61016 * 89.11568 * 9 8 6 11 11 N 1.46488 * 113.61385 * 220.01540 * 9 8 6 12 12 C 1.34779 * 120.00628 * 252.49876 * 11 9 8 13 13 O 1.21593 * 119.99255 * 359.97438 * 12 11 9 14 14 C 1.47528 * 120.00697 * 180.02562 * 12 11 9 15 15 C 1.40136 * 120.19709 * 179.72232 * 14 12 11 16 16 O 1.35655 * 120.14476 * 359.97438 * 15 14 12 17 17 C 1.38708 * 119.70268 * 179.74444 * 15 14 12 18 18 C 1.38048 * 120.08108 * 0.53408 * 17 15 14 19 19 C 1.50707 * 119.80450 * 179.76166 * 18 17 15 20 20 O 1.42904 * 109.47045 * 64.97590 * 19 18 17 21 21 Si 1.86304 * 109.47223 * 184.97692 * 19 18 17 22 22 C 1.38543 * 120.39629 * 359.74183 * 18 17 15 23 23 C 1.37786 * 120.29667 * 359.97438 * 22 18 17 24 24 C 1.53778 * 87.08212 * 334.57025 * 9 8 6 25 25 H 1.09002 * 109.47379 * 59.99613 * 1 2 3 26 26 H 1.09001 * 109.46782 * 299.99696 * 1 2 3 27 27 H 1.09004 * 109.47085 * 179.97438 * 1 2 3 28 28 H 1.09008 * 109.47488 * 300.00148 * 5 3 2 29 29 H 1.09001 * 109.47517 * 59.99934 * 5 3 2 30 30 H 1.08999 * 113.61224 * 254.53205 * 8 6 5 31 31 H 1.09003 * 113.61275 * 25.43293 * 8 6 5 32 32 H 0.97008 * 119.99729 * 72.50274 * 11 9 8 33 33 H 0.96706 * 113.99791 * 89.99930 * 16 15 14 34 34 H 1.08002 * 119.95926 * 180.24998 * 17 15 14 35 35 H 1.09002 * 109.46915 * 304.97683 * 19 18 17 36 36 H 0.96694 * 113.99625 * 179.97438 * 20 19 18 37 37 H 1.48501 * 109.99684 * 178.68229 * 21 19 18 38 38 H 1.48495 * 110.00187 * 300.00140 * 21 19 18 39 39 H 1.07999 * 119.85681 * 180.02562 * 22 18 17 40 40 H 1.08008 * 120.04744 * 180.02562 * 23 22 18 41 41 H 1.09007 * 113.60786 * 270.88353 * 24 9 8 42 42 H 1.08996 * 113.69662 * 139.99496 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0001 2.7421 0.0002 7 1 3.4247 3.3540 -0.6944 8 6 4.1165 3.3494 1.4083 9 6 5.3818 4.0666 0.9089 10 1 5.1840 5.0417 0.4636 11 7 6.4655 4.0989 1.8940 12 6 6.7761 5.2531 2.5168 13 8 6.1570 6.2677 2.2606 14 6 7.8678 5.2857 3.5086 15 6 8.1979 6.4849 4.1542 16 8 7.5151 7.6220 3.8699 17 6 9.2227 6.5027 5.0888 18 6 9.9207 5.3460 5.3725 19 6 11.0366 5.3737 6.3851 20 8 10.5015 5.6748 7.6755 21 14 11.8735 3.7099 6.4327 22 6 9.6013 4.1596 4.7322 23 6 8.5825 4.1224 3.8053 24 6 5.5208 2.9350 -0.1231 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 3.9565 0.7806 0.8892 29 1 3.9557 0.7810 -0.8908 30 1 3.3009 4.0272 1.6602 31 1 4.3112 2.6120 2.1871 32 1 6.9597 3.2894 2.0981 33 1 6.7393 7.7653 4.4292 34 1 9.4779 7.4237 5.5919 35 1 11.7622 6.1375 6.1053 36 1 11.1648 5.7087 8.3781 37 1 12.9961 3.7337 7.4045 38 1 10.8948 2.6597 6.8128 39 1 10.1529 3.2597 4.9610 40 1 8.3366 3.1953 3.3088 41 1 6.0994 2.0843 0.2371 42 1 5.8392 3.2769 -1.1078 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_13422076.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:26:05 Heat of formation + Delta-G solvation = -135.732090 kcal Electronic energy + Delta-G solvation = -26411.585327 eV Core-core repulsion = 22324.772013 eV Total energy + Delta-G solvation = -4086.813313 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.134 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.78983 -41.42360 -40.43880 -39.13502 -38.29832 -37.37329 -37.27975 -34.81364 -32.93844 -31.43796 -31.08509 -28.50754 -27.56307 -26.79631 -24.79910 -23.87282 -23.11223 -21.87714 -21.44854 -20.67555 -19.22682 -18.68896 -18.61646 -18.44809 -17.90556 -17.52726 -17.41434 -16.64421 -16.59501 -16.30391 -16.02736 -15.81259 -15.59908 -15.32650 -14.84940 -14.68557 -14.45590 -14.09452 -14.01121 -13.85334 -13.62054 -13.41231 -13.32344 -12.98408 -12.94117 -12.83565 -12.57904 -12.18330 -12.08057 -11.91242 -11.75750 -11.59734 -11.44667 -11.34355 -10.71807 -10.62712 -10.12282 -9.96828 -9.74715 -5.07941 -0.37115 0.14371 1.12865 1.24519 1.48327 1.71871 1.78203 1.84127 2.13692 2.57620 3.11747 3.19244 3.34816 3.38964 3.56125 3.65015 3.68495 3.72235 3.77808 3.86290 4.04446 4.17284 4.18664 4.21128 4.23201 4.24774 4.29777 4.41880 4.56498 4.57740 4.60560 4.70236 4.72793 4.77480 4.95010 4.98873 5.04381 5.13706 5.24894 5.24962 5.43517 5.53803 5.56881 6.29401 6.49326 6.74346 6.77614 7.26733 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.147 4.147 9 C 0.125 3.875 10 H 0.119 0.881 11 N -0.719 5.719 12 C 0.560 3.440 13 O -0.517 6.517 14 C -0.165 4.165 15 C 0.173 3.827 16 O -0.476 6.476 17 C -0.128 4.128 18 C -0.029 4.029 19 C -0.083 4.083 20 O -0.535 6.535 21 Si 0.688 3.312 22 C -0.134 4.134 23 C -0.065 4.065 24 C -0.140 4.140 25 H 0.064 0.936 26 H 0.063 0.937 27 H 0.102 0.898 28 H 0.107 0.893 29 H 0.110 0.890 30 H 0.077 0.923 31 H 0.085 0.915 32 H 0.399 0.601 33 H 0.398 0.602 34 H 0.139 0.861 35 H 0.082 0.918 36 H 0.383 0.617 37 H -0.259 1.259 38 H -0.253 1.253 39 H 0.136 0.864 40 H 0.135 0.865 41 H 0.090 0.910 42 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.183 -6.228 -0.092 7.503 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.186 4.186 9 C 0.020 3.980 10 H 0.137 0.863 11 N -0.371 5.371 12 C 0.347 3.653 13 O -0.393 6.393 14 C -0.169 4.169 15 C 0.126 3.874 16 O -0.288 6.288 17 C -0.147 4.147 18 C -0.030 4.030 19 C -0.193 4.193 20 O -0.342 6.342 21 Si 0.589 3.411 22 C -0.152 4.152 23 C -0.083 4.083 24 C -0.178 4.178 25 H 0.082 0.918 26 H 0.082 0.918 27 H 0.121 0.879 28 H 0.125 0.875 29 H 0.128 0.872 30 H 0.096 0.904 31 H 0.103 0.897 32 H 0.235 0.765 33 H 0.257 0.743 34 H 0.157 0.843 35 H 0.099 0.901 36 H 0.231 0.769 37 H -0.185 1.185 38 H -0.177 1.177 39 H 0.153 0.847 40 H 0.152 0.848 41 H 0.109 0.891 42 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 3.567 -5.772 -0.560 6.808 hybrid contribution -0.380 0.163 1.580 1.634 sum 3.187 -5.609 1.021 6.531 Atomic orbital electron populations 1.23298 0.75966 1.03910 1.02706 1.86504 1.23773 1.33564 1.84105 1.23827 0.92316 0.81385 0.72407 1.90697 1.67233 1.36305 1.44762 1.21409 0.87585 0.98913 1.06068 1.22254 0.96200 0.94131 0.99237 0.87399 1.23573 0.98443 1.00187 0.96383 1.22480 0.86361 0.99962 0.89169 0.86312 1.45889 1.36998 1.11389 1.42790 1.18077 0.82881 0.83491 0.80837 1.90837 1.52000 1.32968 1.63477 1.20425 0.99978 0.94328 1.02142 1.18480 0.92270 0.84808 0.91823 1.84754 1.44228 1.37732 1.62043 1.21322 0.96778 0.99238 0.97319 1.19309 0.95467 0.93162 0.95014 1.24912 0.98152 1.12031 0.84172 1.86583 1.38108 1.92702 1.16826 0.94944 0.79745 0.75879 0.90517 1.20919 0.98630 0.97369 0.98270 1.21107 0.94139 0.96889 0.96197 1.23431 0.95668 0.98524 1.00154 0.91765 0.91793 0.87935 0.87453 0.87170 0.90394 0.89653 0.76529 0.74337 0.84344 0.90053 0.76909 1.18454 1.17747 0.84656 0.84776 0.89117 0.89966 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.40 10.57 -39.26 -0.41 -0.81 16 3 C 0.46 0.59 7.96 36.00 0.29 0.88 16 4 O -0.50 -2.25 15.51 -18.75 -0.29 -2.54 16 5 C -0.10 0.24 5.65 -27.88 -0.16 0.08 16 6 C -0.10 0.16 3.15 -89.80 -0.28 -0.13 16 7 H 0.11 0.00 7.68 -51.93 -0.40 -0.40 16 8 C -0.15 0.08 7.43 -25.91 -0.19 -0.12 16 9 C 0.13 -0.06 4.24 -67.13 -0.28 -0.34 16 10 H 0.12 0.20 7.47 -51.93 -0.39 -0.18 16 11 N -0.72 0.44 5.30 -54.06 -0.29 0.15 16 12 C 0.56 1.55 7.76 -12.47 -0.10 1.45 16 13 O -0.52 -3.41 14.76 -16.59 -0.24 -3.65 16 14 C -0.17 -0.26 5.89 -104.85 -0.62 -0.87 16 15 C 0.17 0.43 6.72 -38.70 -0.26 0.17 16 16 O -0.48 -1.60 11.58 -40.54 -0.47 -2.07 16 17 C -0.13 -0.18 9.60 -39.48 -0.38 -0.56 16 18 C -0.03 -0.01 5.39 -104.58 -0.56 -0.57 16 19 C -0.08 0.09 2.78 36.01 0.10 0.19 16 20 O -0.53 -0.09 12.81 -35.23 -0.45 -0.55 16 21 Si 0.69 -1.53 29.83 -169.99 -5.07 -6.60 16 22 C -0.13 0.14 8.64 -39.63 -0.34 -0.20 16 23 C -0.06 0.08 9.54 -39.20 -0.37 -0.30 16 24 C -0.14 0.42 7.39 -25.92 -0.19 0.23 16 25 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 26 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 27 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 28 H 0.11 -0.43 7.84 -51.92 -0.41 -0.83 16 29 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 30 H 0.08 0.13 8.14 -51.93 -0.42 -0.30 16 31 H 0.08 -0.13 7.90 -51.93 -0.41 -0.54 16 32 H 0.40 -1.44 6.76 -40.82 -0.28 -1.72 16 33 H 0.40 -0.05 9.06 45.56 0.41 0.36 16 34 H 0.14 0.11 8.06 -52.49 -0.42 -0.31 16 35 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 36 H 0.38 -1.43 8.74 45.56 0.40 -1.03 16 37 H -0.26 0.00 7.11 56.52 0.40 0.40 16 38 H -0.25 -0.13 7.04 56.52 0.40 0.27 16 39 H 0.14 -0.42 4.83 -52.49 -0.25 -0.67 16 40 H 0.13 -0.61 6.40 -52.48 -0.34 -0.95 16 41 H 0.09 -0.43 8.08 -51.93 -0.42 -0.85 16 42 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 LS Contribution 356.81 15.07 5.38 5.38 Total: 0.00 -11.48 356.81 -8.79 -20.27 By element: Atomic # 1 Polarization: -5.89 SS G_CDS: -4.65 Total: -10.54 kcal Atomic # 6 Polarization: 3.26 SS G_CDS: -2.29 Total: 0.97 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.29 Total: 0.15 kcal Atomic # 8 Polarization: -7.74 SS G_CDS: -1.87 Total: -9.62 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.07 Total: -6.60 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -11.48 -8.79 -20.27 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_13422076.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.463 kcal (2) G-P(sol) polarization free energy of solvation -11.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.942 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.791 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.269 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.732 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds