Wall clock time and date at job start Sun Mar 7 2021 14:26:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34226 * 116.99910 * 2 1 4 4 O 1.20831 * 119.99899 * 359.97438 * 3 2 1 5 5 C 1.50698 * 120.00217 * 179.97438 * 3 2 1 6 6 C 1.53003 * 109.47268 * 180.02562 * 5 3 2 7 7 H 1.08996 * 112.85140 * 43.79934 * 6 5 3 8 8 C 1.53781 * 113.61480 * 174.99967 * 6 5 3 9 9 C 1.53786 * 87.17350 * 139.93948 * 8 6 5 10 10 H 1.08993 * 113.61491 * 89.15923 * 9 8 6 11 11 N 1.46501 * 113.61366 * 220.06429 * 9 8 6 12 12 C 1.34773 * 120.00122 * 204.99908 * 11 9 8 13 13 O 1.21289 * 119.99571 * 359.97438 * 12 11 9 14 14 C 1.50691 * 120.00316 * 179.97438 * 12 11 9 15 15 C 1.53046 * 109.33148 * 179.97438 * 14 12 11 16 16 C 1.53541 * 108.56172 * 169.83117 * 15 14 12 17 17 N 1.47025 * 107.66058 * 299.05487 * 16 15 14 18 18 C 1.38927 * 118.88924 * 43.66141 * 17 16 15 19 19 C 1.31116 * 121.84232 * 346.68650 * 18 17 16 20 20 C 1.50700 * 118.54362 * 180.42472 * 19 18 17 21 21 O 1.42899 * 109.47205 * 249.97867 * 20 19 18 22 22 Si 1.86300 * 109.47198 * 9.97964 * 20 19 18 23 23 C 1.53782 * 113.61259 * 272.49802 * 6 5 3 24 24 H 1.09007 * 109.46770 * 179.97438 * 1 2 3 25 25 H 1.08995 * 109.47486 * 299.99882 * 1 2 3 26 26 H 1.09002 * 109.46919 * 60.00697 * 1 2 3 27 27 H 1.08994 * 109.47135 * 60.00032 * 5 3 2 28 28 H 1.09002 * 109.47330 * 299.99583 * 5 3 2 29 29 H 1.09002 * 113.61445 * 254.52948 * 8 6 5 30 30 H 1.09002 * 113.61408 * 25.34678 * 8 6 5 31 31 H 0.97002 * 119.99797 * 24.99368 * 11 9 8 32 32 H 1.09003 * 109.33052 * 60.34582 * 14 12 11 33 33 H 1.09000 * 109.62060 * 289.55357 * 15 14 12 34 34 H 1.08995 * 109.61969 * 50.11092 * 15 14 12 35 35 H 1.09007 * 109.82206 * 58.59060 * 16 15 14 36 36 H 1.08998 * 109.82179 * 179.50862 * 16 15 14 37 37 H 0.97002 * 120.55854 * 223.68886 * 17 16 15 38 38 H 1.07991 * 119.08087 * 166.68494 * 18 17 16 39 39 H 1.09001 * 109.47237 * 129.98439 * 20 19 18 40 40 H 0.96700 * 114.00227 * 60.00317 * 21 20 19 41 41 H 1.48497 * 109.99811 * 179.97438 * 22 20 19 42 42 H 1.48490 * 109.99965 * 301.31845 * 22 20 19 43 43 H 1.08997 * 113.61668 * 334.56352 * 23 6 5 44 44 H 1.08994 * 113.61387 * 105.47087 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0001 2.7422 0.0011 7 1 3.4246 3.3535 0.6962 8 6 5.5207 2.9350 0.1245 9 6 5.3843 4.0672 -0.9071 10 1 5.1879 5.0424 -0.4617 11 7 6.4687 4.0979 -1.8917 12 6 6.7815 5.2517 -2.5139 13 8 6.1649 6.2646 -2.2590 14 6 7.8973 5.2834 -3.5262 15 6 8.0417 6.7041 -4.0768 16 6 9.3324 6.7785 -4.9051 17 7 10.4561 6.4698 -4.0087 18 6 10.3331 5.4102 -3.1186 19 6 9.1760 4.8457 -2.8708 20 6 9.1266 3.7075 -1.8844 21 8 8.8562 2.4876 -2.5778 22 14 10.7651 3.5736 -1.0080 23 6 4.1163 3.3506 -1.4064 24 1 -0.3633 -1.0278 -0.0005 25 1 -0.3634 0.5138 0.8899 26 1 -0.3633 0.5137 -0.8901 27 1 3.9564 0.7807 -0.8891 28 1 3.9557 0.7811 0.8909 29 1 5.8390 3.2775 1.1092 30 1 6.0993 2.0840 -0.2350 31 1 6.9615 3.2877 -2.0957 32 1 7.6620 4.6022 -4.3440 33 1 7.1863 6.9400 -4.7099 34 1 8.0956 7.4130 -3.2506 35 1 9.2945 6.0496 -5.7147 36 1 9.4512 7.7815 -5.3150 37 1 11.2696 6.9974 -4.0379 38 1 11.2153 5.0412 -2.6168 39 1 8.3383 3.8929 -1.1547 40 1 9.5185 2.2589 -3.2443 41 1 10.7292 2.4551 -0.0319 42 1 11.8523 3.3524 -1.9949 43 1 4.3111 2.6140 -2.1859 44 1 3.3008 4.0287 -1.6577 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_15608500.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:26:31 Heat of formation + Delta-G solvation = -98.519788 kcal Electronic energy + Delta-G solvation = -26751.663370 eV Core-core repulsion = 22865.097027 eV Total energy + Delta-G solvation = -3886.566343 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.161 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.75659 -41.32495 -40.02565 -38.77670 -37.81704 -37.31229 -34.65964 -33.40366 -32.76939 -31.42650 -28.44107 -27.38424 -26.69679 -26.14820 -24.14483 -23.27330 -21.92616 -21.39596 -20.55894 -19.39625 -19.01954 -18.48028 -17.91028 -17.79464 -17.46632 -17.35707 -17.00388 -16.38865 -16.20711 -15.87959 -15.55073 -15.19533 -14.99403 -14.77410 -14.59110 -14.38327 -14.09325 -13.98444 -13.57835 -13.50098 -13.34599 -13.16407 -12.91570 -12.75203 -12.70154 -12.27205 -12.08922 -11.94940 -11.80863 -11.71186 -11.63203 -11.44449 -11.35379 -11.26316 -10.53636 -10.48025 -9.71589 -8.56564 -4.98165 1.17521 1.27783 1.29883 1.50907 1.78062 1.88545 1.93338 2.42466 2.50697 3.29409 3.45352 3.49539 3.63060 3.73276 3.77204 3.86324 3.93898 3.99002 4.20725 4.21068 4.22808 4.27687 4.31231 4.37515 4.38411 4.49882 4.52162 4.63432 4.64434 4.70086 4.71544 4.78440 4.79691 4.90667 5.07176 5.12568 5.15867 5.30325 5.35210 5.38573 5.49254 5.73042 6.18547 6.39151 6.72867 6.75931 6.82922 7.46262 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.103 4.103 6 C -0.099 4.099 7 H 0.107 0.893 8 C -0.141 4.141 9 C 0.119 3.881 10 H 0.117 0.883 11 N -0.721 5.721 12 C 0.526 3.474 13 O -0.541 6.541 14 C -0.037 4.037 15 C -0.121 4.121 16 C 0.119 3.881 17 N -0.747 5.747 18 C 0.154 3.846 19 C -0.281 4.281 20 C -0.075 4.075 21 O -0.542 6.542 22 Si 0.673 3.327 23 C -0.147 4.147 24 H 0.102 0.898 25 H 0.063 0.937 26 H 0.063 0.937 27 H 0.107 0.893 28 H 0.110 0.890 29 H 0.081 0.919 30 H 0.091 0.909 31 H 0.413 0.587 32 H 0.094 0.906 33 H 0.080 0.920 34 H 0.082 0.918 35 H 0.061 0.939 36 H 0.083 0.917 37 H 0.404 0.596 38 H 0.134 0.866 39 H 0.125 0.875 40 H 0.378 0.622 41 H -0.257 1.257 42 H -0.262 1.262 43 H 0.084 0.916 44 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.757 -1.860 -0.884 5.184 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.391 6.391 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.125 0.875 8 C -0.180 4.180 9 C 0.014 3.986 10 H 0.135 0.865 11 N -0.377 5.377 12 C 0.313 3.687 13 O -0.417 6.417 14 C -0.059 4.059 15 C -0.159 4.159 16 C -0.005 4.005 17 N -0.376 5.376 18 C 0.032 3.968 19 C -0.292 4.292 20 C -0.186 4.186 21 O -0.349 6.349 22 Si 0.576 3.424 23 C -0.186 4.186 24 H 0.120 0.880 25 H 0.082 0.918 26 H 0.082 0.918 27 H 0.126 0.874 28 H 0.128 0.872 29 H 0.099 0.901 30 H 0.109 0.891 31 H 0.254 0.746 32 H 0.112 0.888 33 H 0.099 0.901 34 H 0.101 0.899 35 H 0.079 0.921 36 H 0.102 0.898 37 H 0.238 0.762 38 H 0.151 0.849 39 H 0.142 0.858 40 H 0.226 0.774 41 H -0.182 1.182 42 H -0.188 1.188 43 H 0.102 0.898 44 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 4.154 -1.333 -0.244 4.370 hybrid contribution 0.156 -0.961 -1.164 1.517 sum 4.310 -2.293 -1.408 5.081 Atomic orbital electron populations 1.23291 0.76036 1.03869 1.02681 1.86508 1.23720 1.33598 1.84118 1.23844 0.92320 0.81357 0.72347 1.90693 1.67231 1.36305 1.44822 1.21419 0.87491 0.99044 1.06073 1.22246 0.96223 0.94003 0.99279 0.87477 1.23439 0.95643 0.98805 1.00074 1.22490 0.86863 0.99623 0.89610 0.86511 1.46601 1.36440 1.12504 1.42191 1.20551 0.83696 0.83085 0.81366 1.90702 1.53194 1.33640 1.64207 1.19668 0.91334 0.98456 0.96403 1.21735 0.97622 0.95676 1.00893 1.21658 0.85891 1.01151 0.91832 1.44607 1.18762 1.34068 1.40209 1.20517 0.96637 0.88671 0.90985 1.20473 0.93195 1.06150 1.09409 1.25122 1.12909 0.82988 0.97571 1.86403 1.52306 1.40436 1.55724 0.94985 0.75524 0.89371 0.82538 1.23578 0.98467 1.00178 0.96328 0.87972 0.91780 0.91814 0.87440 0.87224 0.90068 0.89077 0.74584 0.88823 0.90142 0.89912 0.92098 0.89810 0.76189 0.84935 0.85810 0.77375 1.18222 1.18766 0.89764 0.90534 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.07 16 2 O -0.36 -0.67 10.57 -39.25 -0.41 -1.08 16 3 C 0.46 0.98 7.96 36.00 0.29 1.27 16 4 O -0.50 -2.61 15.51 -18.75 -0.29 -2.90 16 5 C -0.10 0.11 5.65 -27.88 -0.16 -0.04 16 6 C -0.10 0.04 3.15 -89.80 -0.28 -0.25 16 7 H 0.11 0.09 7.68 -51.93 -0.40 -0.31 16 8 C -0.14 0.20 7.39 -25.92 -0.19 0.01 16 9 C 0.12 0.10 4.25 -67.02 -0.28 -0.19 16 10 H 0.12 0.28 7.47 -51.93 -0.39 -0.10 16 11 N -0.72 -0.68 3.66 -52.93 -0.19 -0.88 16 12 C 0.53 1.51 6.85 -10.99 -0.08 1.44 16 13 O -0.54 -3.55 15.41 5.55 0.09 -3.46 16 14 C -0.04 -0.02 2.75 -93.14 -0.26 -0.28 16 15 C -0.12 -0.04 4.91 -26.43 -0.13 -0.17 16 16 C 0.12 -0.23 7.16 -3.48 -0.02 -0.25 16 17 N -0.75 1.61 5.83 -60.68 -0.35 1.26 16 18 C 0.15 -0.24 9.61 -16.08 -0.15 -0.40 16 19 C -0.28 0.20 5.03 -101.34 -0.51 -0.31 16 20 C -0.07 0.09 1.69 36.01 0.06 0.15 16 21 O -0.54 0.73 11.40 -35.23 -0.40 0.33 16 22 Si 0.67 -1.15 29.97 -169.99 -5.09 -6.24 16 23 C -0.15 -0.12 7.44 -25.82 -0.19 -0.32 16 24 H 0.10 -0.24 8.14 -51.92 -0.42 -0.67 16 25 H 0.06 0.00 8.13 -51.93 -0.42 -0.42 16 26 H 0.06 0.01 8.13 -51.93 -0.42 -0.41 16 27 H 0.11 -0.26 7.84 -51.93 -0.41 -0.67 16 28 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 29 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 30 H 0.09 -0.20 8.08 -51.93 -0.42 -0.62 16 31 H 0.41 -0.03 5.25 -40.82 -0.21 -0.24 16 32 H 0.09 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.08 0.04 8.14 -51.93 -0.42 -0.39 16 34 H 0.08 0.18 7.77 -51.93 -0.40 -0.22 16 35 H 0.06 -0.12 8.14 -51.92 -0.42 -0.55 16 36 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 37 H 0.40 -1.61 8.96 -40.82 -0.37 -1.97 16 38 H 0.13 -0.39 4.31 -52.49 -0.23 -0.61 16 39 H 0.12 -0.08 5.29 -51.93 -0.27 -0.35 16 40 H 0.38 -1.40 8.70 45.56 0.40 -1.00 16 41 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 42 H -0.26 0.06 6.82 56.52 0.39 0.45 16 43 H 0.08 0.02 7.90 -51.93 -0.41 -0.39 16 44 H 0.08 0.20 8.14 -51.93 -0.42 -0.22 16 LS Contribution 351.27 15.07 5.29 5.29 Total: 0.00 -8.30 351.27 -8.77 -17.06 By element: Atomic # 1 Polarization: -4.58 SS G_CDS: -6.55 Total: -11.13 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: -0.85 Total: 1.75 kcal Atomic # 7 Polarization: 0.93 SS G_CDS: -0.55 Total: 0.38 kcal Atomic # 8 Polarization: -6.09 SS G_CDS: -1.02 Total: -7.11 kcal Atomic # 14 Polarization: -1.15 SS G_CDS: -5.09 Total: -6.24 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -8.30 -8.77 -17.06 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_15608500.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.457 kcal (2) G-P(sol) polarization free energy of solvation -8.297 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.754 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.765 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.063 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.520 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds