Wall clock time and date at job start Sun Mar 7 2021 14:26:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34225 * 116.99937 * 2 1 4 4 O 1.20825 * 119.99866 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00134 * 180.02562 * 3 2 1 6 6 C 1.52998 * 109.47352 * 180.02562 * 5 3 2 7 7 H 1.08999 * 112.90445 * 43.74956 * 6 5 3 8 8 C 1.53781 * 113.61705 * 174.99886 * 6 5 3 9 9 C 1.53782 * 87.08366 * 139.98164 * 8 6 5 10 10 H 1.09004 * 113.61143 * 89.20073 * 9 8 6 11 11 N 1.46491 * 113.61819 * 220.02424 * 9 8 6 12 12 C 1.34780 * 120.00321 * 205.00076 * 11 9 8 13 13 O 1.21632 * 119.99593 * 0.02562 * 12 11 9 14 14 C 1.47261 * 120.00393 * 179.97438 * 12 11 9 15 15 C 1.36330 * 126.96729 * 179.97438 * 14 12 11 16 16 C 1.50991 * 126.79614 * 0.07049 * 15 14 12 17 17 C 1.53390 * 108.25847 * 164.31180 * 16 15 14 18 18 C 1.53164 * 109.04266 * 48.45691 * 17 16 15 19 19 C 1.52982 * 109.65511 * 290.56706 * 18 17 16 20 20 N 1.35215 * 108.65787 * 180.02562 * 15 14 12 21 21 C 1.36425 * 109.89985 * 359.95115 * 20 15 14 22 22 C 1.50700 * 125.48968 * 180.02562 * 21 20 15 23 23 O 1.42898 * 109.47612 * 330.00274 * 22 21 20 24 24 Si 1.86301 * 109.46916 * 209.99706 * 22 21 20 25 25 C 1.34490 * 109.01326 * 0.04236 * 21 20 15 26 26 C 1.53777 * 113.61570 * 272.49902 * 6 5 3 27 27 H 1.08999 * 109.47368 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.47193 * 299.99583 * 1 2 3 29 29 H 1.08999 * 109.47844 * 59.99872 * 1 2 3 30 30 H 1.09001 * 109.46821 * 59.99952 * 5 3 2 31 31 H 1.09001 * 109.47281 * 300.00464 * 5 3 2 32 32 H 1.09004 * 113.61045 * 25.43950 * 8 6 5 33 33 H 1.08998 * 113.62156 * 254.53575 * 8 6 5 34 34 H 0.97004 * 120.00201 * 24.99616 * 11 9 8 35 35 H 1.09004 * 109.70674 * 284.00062 * 16 15 14 36 36 H 1.09002 * 109.70785 * 44.57774 * 16 15 14 37 37 H 1.08997 * 109.54787 * 168.32550 * 17 16 15 38 38 H 1.08997 * 109.54424 * 288.58995 * 17 16 15 39 39 H 1.09004 * 109.46118 * 50.43986 * 18 17 16 40 40 H 1.09000 * 109.46001 * 170.40153 * 18 17 16 41 41 H 1.09003 * 109.39853 * 290.88815 * 19 18 17 42 42 H 1.09001 * 109.63960 * 170.60669 * 19 18 17 43 43 H 1.09004 * 109.47056 * 90.00603 * 22 21 20 44 44 H 0.96696 * 113.99976 * 180.02562 * 23 22 21 45 45 H 1.48503 * 109.99810 * 60.00417 * 24 22 21 46 46 H 1.48501 * 109.99970 * 181.32183 * 24 22 21 47 47 H 1.08004 * 126.82037 * 179.97438 * 25 21 20 48 48 H 1.09000 * 113.61488 * 105.47186 * 26 6 5 49 49 H 1.08999 * 113.61728 * 334.56317 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0001 2.7421 0.0002 7 1 3.4251 3.3541 0.6951 8 6 5.5208 2.9348 0.1225 9 6 5.3810 4.0678 -0.9079 10 1 5.1850 5.0425 -0.4610 11 7 6.4638 4.1013 -1.8939 12 6 6.7739 5.2564 -2.5154 13 8 6.1548 6.2711 -2.2572 14 6 7.8628 5.2902 -3.5062 15 6 8.2929 6.3725 -4.2150 16 6 7.7474 7.7783 -4.1391 17 6 8.7631 8.7239 -4.7926 18 6 9.1810 8.1482 -6.1490 19 6 10.0221 6.8882 -5.9361 20 7 9.3105 5.9872 -5.0179 21 6 9.5594 4.6569 -4.8460 22 6 10.6203 3.8651 -5.5662 23 8 10.8397 4.4296 -6.8605 24 14 10.0608 2.0973 -5.7463 25 6 8.7051 4.1659 -3.9306 26 6 4.1152 3.3512 -1.4071 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3635 0.5138 -0.8899 30 1 3.9556 0.7809 -0.8908 31 1 3.9564 0.7805 0.8891 32 1 6.0992 2.0846 -0.2393 33 1 5.8399 3.2768 1.1070 34 1 6.9579 3.2922 -2.0995 35 1 6.7981 7.8335 -4.6720 36 1 7.6003 8.0597 -3.0964 37 1 8.3085 9.7040 -4.9370 38 1 9.6391 8.8179 -4.1510 39 1 8.2914 7.8939 -6.7253 40 1 9.7665 8.8892 -6.6932 41 1 10.9842 7.1638 -5.5043 42 1 10.1790 6.3867 -6.8911 43 1 11.5477 3.8961 -4.9942 44 1 11.5115 3.9690 -7.3816 45 1 8.7971 2.0413 -6.5242 46 1 11.1118 1.2987 -6.4266 47 1 8.6498 3.1466 -3.5780 48 1 3.2995 4.0294 -1.6574 49 1 4.3093 2.6149 -2.1871 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_16915396.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:26:34 Heat of formation + Delta-G solvation = -89.883781 kcal Electronic energy + Delta-G solvation = -30941.214749 eV Core-core repulsion = 26643.032991 eV Total energy + Delta-G solvation = -4298.181757 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.177 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.65498 -41.54663 -40.56998 -38.99102 -38.09214 -37.30622 -36.88142 -34.47253 -33.41891 -31.57232 -31.16789 -29.42575 -28.34578 -26.65848 -26.63388 -24.94157 -24.52940 -23.21336 -21.66754 -21.61896 -21.07883 -20.44001 -19.34551 -18.68441 -18.44489 -18.06109 -17.71185 -17.44249 -16.85803 -16.71185 -16.47556 -16.15373 -15.90537 -15.57427 -15.32643 -15.10476 -15.07052 -14.82322 -14.52843 -14.38372 -14.36058 -14.00554 -13.88000 -13.69356 -13.48238 -13.28925 -13.20724 -12.95820 -12.88695 -12.69521 -12.45086 -12.14390 -12.03260 -11.98523 -11.85201 -11.77425 -11.72581 -11.69925 -11.33134 -11.24262 -10.85263 -10.52892 -9.80565 -9.44493 -8.89302 -5.05075 0.92569 1.01393 1.31366 1.49260 1.53589 1.78719 1.83622 2.00702 2.58769 2.77833 2.95389 3.47571 3.52112 3.54625 3.58805 3.75645 3.78501 3.84485 3.84997 3.89855 3.97080 4.17347 4.22080 4.27274 4.29284 4.30969 4.38006 4.38794 4.44452 4.49545 4.50999 4.65612 4.67536 4.71585 4.73380 4.79759 4.82528 4.88967 4.92289 4.97692 5.08652 5.11713 5.17692 5.22136 5.26963 5.42160 5.51048 5.76978 5.84806 6.14595 6.24675 6.32588 6.84066 6.84612 7.61387 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.100 4.100 7 H 0.106 0.894 8 C -0.139 4.139 9 C 0.127 3.873 10 H 0.117 0.883 11 N -0.718 5.718 12 C 0.596 3.404 13 O -0.549 6.549 14 C -0.234 4.234 15 C 0.119 3.881 16 C -0.056 4.056 17 C -0.129 4.129 18 C -0.139 4.139 19 C 0.103 3.897 20 N -0.424 5.424 21 C 0.033 3.967 22 C -0.051 4.051 23 O -0.542 6.542 24 Si 0.707 3.293 25 C -0.166 4.166 26 C -0.147 4.147 27 H 0.102 0.898 28 H 0.063 0.937 29 H 0.063 0.937 30 H 0.108 0.892 31 H 0.109 0.891 32 H 0.091 0.909 33 H 0.080 0.920 34 H 0.400 0.600 35 H 0.088 0.912 36 H 0.100 0.900 37 H 0.079 0.921 38 H 0.068 0.932 39 H 0.074 0.926 40 H 0.087 0.913 41 H 0.078 0.922 42 H 0.109 0.891 43 H 0.079 0.921 44 H 0.383 0.617 45 H -0.252 1.252 46 H -0.259 1.259 47 H 0.153 0.847 48 H 0.075 0.925 49 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.968 -4.636 -0.125 6.796 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.280 6.280 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.139 4.139 6 C -0.119 4.119 7 H 0.124 0.876 8 C -0.178 4.178 9 C 0.022 3.978 10 H 0.135 0.865 11 N -0.368 5.368 12 C 0.385 3.615 13 O -0.428 6.428 14 C -0.243 4.243 15 C 0.001 3.999 16 C -0.093 4.093 17 C -0.166 4.166 18 C -0.177 4.177 19 C -0.018 4.018 20 N -0.100 5.100 21 C -0.076 4.076 22 C -0.160 4.160 23 O -0.350 6.350 24 Si 0.606 3.394 25 C -0.190 4.190 26 C -0.186 4.186 27 H 0.120 0.880 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.126 0.874 31 H 0.128 0.872 32 H 0.109 0.891 33 H 0.098 0.902 34 H 0.235 0.765 35 H 0.106 0.894 36 H 0.119 0.881 37 H 0.098 0.902 38 H 0.087 0.913 39 H 0.092 0.908 40 H 0.106 0.894 41 H 0.096 0.904 42 H 0.127 0.873 43 H 0.096 0.904 44 H 0.232 0.768 45 H -0.176 1.176 46 H -0.184 1.184 47 H 0.170 0.830 48 H 0.094 0.906 49 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 3.867 -3.651 -0.547 5.347 hybrid contribution 0.820 -0.056 -1.087 1.363 sum 4.688 -3.708 -1.635 6.196 Atomic orbital electron populations 1.23286 0.76059 1.03854 1.02678 1.86504 1.23701 1.33629 1.84136 1.23861 0.92363 0.81348 0.72370 1.90695 1.67238 1.36315 1.44774 1.21416 0.87450 0.99045 1.06034 1.22258 0.96304 0.93972 0.99372 0.87561 1.23427 0.95485 0.98718 1.00131 1.22401 0.86544 0.99629 0.89217 0.86549 1.45707 1.36875 1.11550 1.42678 1.17331 0.81672 0.82962 0.79522 1.90766 1.53244 1.33618 1.65160 1.19790 1.03992 0.93779 1.06788 1.20392 0.90425 0.96210 0.92900 1.20510 0.98106 0.87060 1.03634 1.21726 0.99643 0.99415 0.95861 1.21908 1.00848 0.96272 0.98629 1.22212 0.95048 0.90134 0.94386 1.43824 1.26905 1.07635 1.31591 1.19505 1.01610 0.83603 1.02839 1.24510 0.99048 1.07788 0.84671 1.86487 1.63689 1.57103 1.27749 0.94640 0.80788 0.73637 0.90315 1.21534 0.97639 0.98341 1.01517 1.23570 0.98614 1.00197 0.96234 0.87985 0.91798 0.91821 0.87405 0.87248 0.89088 0.90172 0.76508 0.89407 0.88123 0.90223 0.91323 0.90773 0.89432 0.90363 0.87310 0.90361 0.76784 1.17608 1.18416 0.82952 0.90581 0.89662 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.53 10.56 -39.24 -0.41 -0.94 16 3 C 0.46 0.78 7.96 36.01 0.29 1.07 16 4 O -0.50 -2.47 15.51 -18.75 -0.29 -2.76 16 5 C -0.10 0.19 5.65 -27.88 -0.16 0.03 16 6 C -0.10 0.10 3.15 -89.81 -0.28 -0.18 16 7 H 0.11 0.05 7.68 -51.93 -0.40 -0.34 16 8 C -0.14 0.33 7.39 -25.92 -0.19 0.14 16 9 C 0.13 0.04 4.24 -67.12 -0.28 -0.24 16 10 H 0.12 0.28 7.46 -51.93 -0.39 -0.11 16 11 N -0.72 -0.40 5.35 -54.14 -0.29 -0.69 16 12 C 0.60 2.35 7.81 -12.59 -0.10 2.25 16 13 O -0.55 -3.95 14.93 5.25 0.08 -3.87 16 14 C -0.23 -0.75 6.28 -103.48 -0.65 -1.40 16 15 C 0.12 0.39 6.57 -81.65 -0.54 -0.14 16 16 C -0.06 -0.12 5.32 -27.54 -0.15 -0.27 16 17 C -0.13 0.01 5.98 -26.44 -0.16 -0.15 16 18 C -0.14 0.09 5.91 -26.66 -0.16 -0.07 16 19 C 0.10 0.03 6.20 -3.77 -0.02 0.01 16 20 N -0.42 -0.94 3.11 -107.46 -0.33 -1.27 16 21 C 0.03 0.05 6.18 -81.87 -0.51 -0.46 16 22 C -0.05 0.06 2.99 36.01 0.11 0.16 16 23 O -0.54 0.45 9.97 -35.23 -0.35 0.10 16 24 Si 0.71 -1.42 31.11 -169.99 -5.29 -6.71 16 25 C -0.17 -0.12 9.09 -37.47 -0.34 -0.47 16 26 C -0.15 -0.04 7.43 -25.92 -0.19 -0.24 16 27 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 28 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 29 H 0.06 0.00 8.13 -51.93 -0.42 -0.42 16 30 H 0.11 -0.37 7.85 -51.93 -0.41 -0.78 16 31 H 0.11 -0.40 8.14 -51.93 -0.42 -0.82 16 32 H 0.09 -0.38 8.08 -51.93 -0.42 -0.80 16 33 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.40 -0.89 7.85 -40.82 -0.32 -1.21 16 35 H 0.09 0.22 8.14 -51.93 -0.42 -0.20 16 36 H 0.10 0.33 7.40 -51.93 -0.38 -0.06 16 37 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.07 0.00 8.12 -51.93 -0.42 -0.42 16 39 H 0.07 0.01 8.11 -51.93 -0.42 -0.41 16 40 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 41 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 42 H 0.11 0.05 5.94 -51.93 -0.31 -0.26 16 43 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 44 H 0.38 -1.79 8.74 45.56 0.40 -1.39 16 45 H -0.25 -0.50 7.11 56.52 0.40 -0.09 16 46 H -0.26 0.06 7.11 56.52 0.40 0.47 16 47 H 0.15 -0.45 6.52 -52.48 -0.34 -0.80 16 48 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 49 H 0.08 -0.05 7.90 -51.93 -0.41 -0.46 16 LS Contribution 394.48 15.07 5.94 5.94 Total: 0.00 -10.50 394.48 -10.87 -21.37 By element: Atomic # 1 Polarization: -4.62 SS G_CDS: -7.66 Total: -12.28 kcal Atomic # 6 Polarization: 3.36 SS G_CDS: -2.27 Total: 1.10 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -0.62 Total: -1.96 kcal Atomic # 8 Polarization: -6.49 SS G_CDS: -0.98 Total: -7.47 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: -5.29 Total: -6.71 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -10.50 -10.87 -21.37 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_16915396.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.510 kcal (2) G-P(sol) polarization free energy of solvation -10.501 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.012 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.872 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.374 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.884 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds