Wall clock time and date at job start Sun Mar 7 2021 14:26:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34224 * 116.99728 * 2 1 4 4 O 1.20828 * 120.00337 * 0.02562 * 3 2 1 5 5 C 1.50700 * 119.99979 * 180.02562 * 3 2 1 6 6 C 1.52998 * 109.47310 * 180.02562 * 5 3 2 7 7 H 1.09003 * 112.85341 * 43.80170 * 6 5 3 8 8 C 1.53787 * 113.61787 * 174.99740 * 6 5 3 9 9 C 1.53781 * 87.07987 * 140.06383 * 8 6 5 10 10 H 1.09002 * 113.61228 * 89.11929 * 9 8 6 11 11 N 1.46500 * 113.61339 * 219.93875 * 9 8 6 12 12 C 1.34781 * 119.99985 * 203.47543 * 11 9 8 13 13 O 1.21280 * 119.99799 * 359.97438 * 12 11 9 14 14 C 1.50701 * 119.99932 * 179.97438 * 12 11 9 15 15 O 1.42895 * 109.46838 * 179.97438 * 14 12 11 16 16 C 1.35902 * 117.00017 * 179.97438 * 15 14 12 17 17 C 1.38729 * 120.05541 * 359.73110 * 16 15 14 18 18 C 1.38146 * 119.94570 * 179.74176 * 17 16 15 19 19 C 1.38264 * 120.05537 * 0.50554 * 18 17 16 20 20 C 1.50694 * 119.94903 * 179.74712 * 19 18 17 21 21 O 1.42905 * 109.47470 * 245.02447 * 20 19 18 22 22 Si 1.86309 * 109.46885 * 5.02131 * 20 19 18 23 23 C 1.38268 * 120.11035 * 359.76728 * 19 18 17 24 24 C 1.38151 * 120.05722 * 359.97438 * 23 19 18 25 25 C 1.53779 * 113.68908 * 272.53499 * 6 5 3 26 26 H 1.09001 * 109.47161 * 179.97438 * 1 2 3 27 27 H 1.08992 * 109.47439 * 299.99663 * 1 2 3 28 28 H 1.08999 * 109.47693 * 60.00304 * 1 2 3 29 29 H 1.09002 * 109.47544 * 59.99918 * 5 3 2 30 30 H 1.09006 * 109.47024 * 300.00212 * 5 3 2 31 31 H 1.09005 * 113.61051 * 25.51787 * 8 6 5 32 32 H 1.08996 * 113.69311 * 254.62415 * 8 6 5 33 33 H 0.96998 * 120.00149 * 23.46564 * 11 9 8 34 34 H 1.08997 * 109.46730 * 299.99650 * 14 12 11 35 35 H 1.08994 * 109.46768 * 60.00057 * 14 12 11 36 36 H 1.08001 * 120.02500 * 359.97438 * 17 16 15 37 37 H 1.07997 * 119.97349 * 180.22969 * 18 17 16 38 38 H 1.08996 * 109.47612 * 125.01883 * 20 19 18 39 39 H 0.96694 * 114.00542 * 179.97438 * 21 20 19 40 40 H 1.48497 * 110.00076 * 178.68538 * 22 20 19 41 41 H 1.48500 * 109.99652 * 300.00106 * 22 20 19 42 42 H 1.08001 * 119.97673 * 179.97438 * 23 19 18 43 43 H 1.07998 * 120.02620 * 179.97438 * 24 23 19 44 44 H 1.09003 * 113.61775 * 105.46383 * 25 6 5 45 45 H 1.08996 * 113.61960 * 334.55110 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5662 1.2749 -0.0006 6 6 4.0000 2.7421 0.0002 7 1 3.4251 3.3532 0.6961 8 6 5.5208 2.9349 0.1225 9 6 5.3806 4.0693 -0.9062 10 1 5.1831 5.0431 -0.4581 11 7 6.4644 4.1055 -1.8912 12 6 6.7534 5.2549 -2.5332 13 8 6.1159 6.2589 -2.2957 14 6 7.8687 5.2923 -3.5460 15 8 7.9787 6.6112 -4.0848 16 6 8.9441 6.8176 -5.0188 17 6 9.7721 5.7735 -5.4046 18 6 10.7492 5.9845 -6.3582 19 6 10.9091 7.2376 -6.9203 20 6 11.9795 7.4665 -7.9560 21 8 12.9520 8.3790 -7.4426 22 14 12.8035 5.8466 -8.3659 23 6 10.0888 8.2812 -6.5333 24 6 9.1067 8.0741 -5.5840 25 6 4.1149 3.3532 -1.4063 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5137 0.8899 28 1 -0.3634 0.5138 -0.8900 29 1 3.9557 0.7810 -0.8908 30 1 3.9563 0.7806 0.8892 31 1 6.0992 2.0853 -0.2405 32 1 5.8413 3.2754 1.1071 33 1 6.9741 3.3025 -2.0813 34 1 8.8066 5.0169 -3.0639 35 1 7.6530 4.5886 -4.3500 36 1 9.6505 4.7956 -4.9626 37 1 11.3916 5.1712 -6.6616 38 1 11.5299 7.8836 -8.8571 39 1 13.6728 8.5728 -8.0573 40 1 13.8395 6.0535 -9.4094 41 1 13.4204 5.2675 -7.1455 42 1 10.2159 9.2593 -6.9735 43 1 8.4666 8.8897 -5.2818 44 1 3.2990 4.0318 -1.6556 45 1 4.3089 2.6181 -2.1873 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_2989410.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:26:41 Heat of formation + Delta-G solvation = -130.037157 kcal Electronic energy + Delta-G solvation = -27413.894498 eV Core-core repulsion = 23171.790517 eV Total energy + Delta-G solvation = -4242.103982 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -41.76967 -41.43369 -40.80467 -39.60035 -38.72891 -37.41640 -37.26253 -34.90138 -32.46645 -31.86489 -31.70944 -29.64139 -28.37337 -26.85902 -26.21559 -24.75594 -23.79655 -22.32629 -21.84891 -21.62345 -20.64209 -19.46783 -18.61969 -18.53214 -18.25160 -17.83373 -17.55350 -17.42091 -17.25697 -16.77183 -16.69810 -16.24324 -15.69635 -15.56814 -15.48652 -15.01326 -14.89690 -14.51102 -14.41588 -14.11271 -13.94513 -13.92615 -13.69164 -13.54834 -13.46131 -13.38465 -13.00696 -12.88440 -12.47594 -12.23823 -12.19542 -11.97162 -11.88528 -11.77685 -11.67924 -11.50265 -11.38172 -10.85493 -10.48396 -10.14908 -9.99360 -9.17670 -4.99788 0.32549 0.34881 1.22084 1.26535 1.44301 1.47799 1.56360 1.72277 1.92412 2.56465 2.64950 3.28330 3.31585 3.36397 3.46503 3.61629 3.66951 3.73611 3.81461 3.82399 3.86429 3.91478 3.94565 4.15647 4.15881 4.22008 4.26607 4.28303 4.37480 4.38150 4.49426 4.51292 4.58500 4.64855 4.67297 4.71466 4.88010 4.98981 4.99924 5.15056 5.19336 5.28855 5.39736 5.45464 5.55602 5.70977 6.24237 6.38329 6.44382 6.75252 7.09291 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.139 4.139 9 C 0.125 3.875 10 H 0.119 0.881 11 N -0.718 5.718 12 C 0.516 3.484 13 O -0.511 6.511 14 C 0.039 3.961 15 O -0.288 6.288 16 C 0.134 3.866 17 C -0.206 4.206 18 C -0.074 4.074 19 C -0.110 4.110 20 C -0.071 4.071 21 O -0.536 6.536 22 Si 0.681 3.319 23 C -0.050 4.050 24 C -0.145 4.145 25 C -0.147 4.147 26 H 0.102 0.898 27 H 0.064 0.936 28 H 0.064 0.936 29 H 0.108 0.892 30 H 0.110 0.890 31 H 0.092 0.908 32 H 0.082 0.918 33 H 0.403 0.597 34 H 0.095 0.905 35 H 0.096 0.904 36 H 0.132 0.868 37 H 0.130 0.870 38 H 0.075 0.925 39 H 0.379 0.621 40 H -0.262 1.262 41 H -0.256 1.256 42 H 0.133 0.867 43 H 0.136 0.864 44 H 0.078 0.922 45 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.621 -7.855 -1.744 8.208 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.300 3.700 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.177 4.177 9 C 0.021 3.979 10 H 0.137 0.863 11 N -0.371 5.371 12 C 0.301 3.699 13 O -0.384 6.384 14 C -0.040 4.040 15 O -0.200 6.200 16 C 0.088 3.912 17 C -0.224 4.224 18 C -0.091 4.091 19 C -0.111 4.111 20 C -0.181 4.181 21 O -0.344 6.344 22 Si 0.583 3.417 23 C -0.068 4.068 24 C -0.164 4.164 25 C -0.186 4.186 26 H 0.121 0.879 27 H 0.083 0.917 28 H 0.082 0.918 29 H 0.126 0.874 30 H 0.128 0.872 31 H 0.110 0.890 32 H 0.101 0.899 33 H 0.237 0.763 34 H 0.113 0.887 35 H 0.114 0.886 36 H 0.150 0.850 37 H 0.147 0.853 38 H 0.093 0.907 39 H 0.227 0.773 40 H -0.187 1.187 41 H -0.181 1.181 42 H 0.151 0.849 43 H 0.154 0.846 44 H 0.097 0.903 45 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 1.133 -7.131 -0.993 7.288 hybrid contribution 0.860 0.326 -0.191 0.939 sum 1.993 -6.805 -1.184 7.189 Atomic orbital electron populations 1.23300 0.75919 1.03938 1.02729 1.86502 1.23810 1.33537 1.84090 1.23815 0.92304 0.81402 0.72431 1.90702 1.67231 1.36304 1.44751 1.21400 0.87638 0.98818 1.06097 1.22250 0.96122 0.94217 0.99248 0.87368 1.23430 0.95790 0.98386 1.00083 1.22520 0.86294 1.00031 0.89091 0.86344 1.45803 1.36924 1.11862 1.42528 1.20089 0.84349 0.83749 0.81738 1.90792 1.50621 1.33558 1.63439 1.22486 0.98976 0.85363 0.97126 1.86175 1.51288 1.29369 1.53195 1.19065 0.88333 0.94476 0.89289 1.21136 0.99518 0.99012 1.02780 1.20759 0.97113 0.96295 0.94977 1.19151 0.97720 0.94077 1.00129 1.24735 0.92161 1.03672 0.97547 1.86601 1.37997 1.64086 1.45688 0.95139 0.85134 0.80449 0.80977 1.20840 0.92507 0.98732 0.94746 1.20513 1.01202 0.95362 0.99306 1.23572 0.98359 1.00178 0.96458 0.87912 0.91750 0.91770 0.87414 0.87160 0.89001 0.89931 0.76273 0.88725 0.88629 0.84994 0.85266 0.90656 0.77316 1.18688 1.18087 0.84920 0.84589 0.90278 0.89526 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.29 10.57 -39.24 -0.41 -0.71 16 3 C 0.46 0.44 7.96 36.01 0.29 0.72 16 4 O -0.50 -2.10 15.51 -18.75 -0.29 -2.39 16 5 C -0.10 0.28 5.65 -27.88 -0.16 0.13 16 6 C -0.10 0.21 3.15 -89.81 -0.28 -0.08 16 7 H 0.11 -0.05 7.68 -51.93 -0.40 -0.45 16 8 C -0.14 0.52 7.39 -25.92 -0.19 0.32 16 9 C 0.13 -0.16 4.22 -67.12 -0.28 -0.44 16 10 H 0.12 0.12 7.50 -51.93 -0.39 -0.27 16 11 N -0.72 1.54 5.36 -53.01 -0.28 1.25 16 12 C 0.52 0.67 7.91 -10.98 -0.09 0.58 16 13 O -0.51 -3.36 16.12 -14.35 -0.23 -3.59 16 14 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 15 O -0.29 -0.89 9.67 -39.34 -0.38 -1.27 16 16 C 0.13 0.29 6.69 -39.22 -0.26 0.03 16 17 C -0.21 -0.04 9.04 -39.43 -0.36 -0.40 16 18 C -0.07 -0.03 8.66 -39.61 -0.34 -0.37 16 19 C -0.11 -0.15 5.38 -104.60 -0.56 -0.72 16 20 C -0.07 0.00 2.79 36.00 0.10 0.10 16 21 O -0.54 -0.73 12.81 -35.23 -0.45 -1.18 16 22 Si 0.68 -0.73 29.85 -169.99 -5.07 -5.80 16 23 C -0.05 -0.09 9.68 -39.60 -0.38 -0.47 16 24 C -0.15 -0.34 9.99 -39.43 -0.39 -0.73 16 25 C -0.15 0.17 7.44 -25.92 -0.19 -0.02 16 26 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 27 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 28 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 29 H 0.11 -0.48 7.85 -51.93 -0.41 -0.89 16 30 H 0.11 -0.49 8.14 -51.93 -0.42 -0.91 16 31 H 0.09 -0.51 8.07 -51.93 -0.42 -0.93 16 32 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 33 H 0.40 -2.27 8.71 -40.82 -0.36 -2.63 16 34 H 0.09 -0.33 7.65 -51.93 -0.40 -0.73 16 35 H 0.10 -0.36 7.68 -51.93 -0.40 -0.76 16 36 H 0.13 -0.38 6.30 -52.49 -0.33 -0.71 16 37 H 0.13 -0.19 4.86 -52.49 -0.26 -0.45 16 38 H 0.08 -0.12 7.96 -51.93 -0.41 -0.54 16 39 H 0.38 -1.00 8.74 45.56 0.40 -0.60 16 40 H -0.26 -0.27 7.11 56.52 0.40 0.14 16 41 H -0.26 -0.48 7.05 56.52 0.40 -0.09 16 42 H 0.13 0.08 8.06 -52.49 -0.42 -0.35 16 43 H 0.14 0.24 8.06 -52.49 -0.42 -0.18 16 44 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 45 H 0.09 -0.20 7.90 -51.93 -0.41 -0.61 16 LS Contribution 381.59 15.07 5.75 5.75 Total: 0.00 -12.19 381.59 -9.59 -21.78 By element: Atomic # 1 Polarization: -7.32 SS G_CDS: -6.36 Total: -13.68 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -1.85 Total: -0.16 kcal Atomic # 7 Polarization: 1.54 SS G_CDS: -0.28 Total: 1.25 kcal Atomic # 8 Polarization: -7.37 SS G_CDS: -1.77 Total: -9.14 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -5.07 Total: -5.80 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -12.19 -9.59 -21.78 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_2989410.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.261 kcal (2) G-P(sol) polarization free energy of solvation -12.185 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.447 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.591 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.776 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.037 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds