Wall clock time and date at job start Sun Mar 7 2021 14:26:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34229 * 117.00179 * 2 1 4 4 O 1.20823 * 119.99594 * 0.02562 * 3 2 1 5 5 C 1.50693 * 119.99974 * 179.97438 * 3 2 1 6 6 C 1.53001 * 109.47193 * 179.97438 * 5 3 2 7 7 H 1.08999 * 112.85246 * 316.20167 * 6 5 3 8 8 C 1.53783 * 113.61487 * 87.50295 * 6 5 3 9 9 C 1.53779 * 87.08341 * 139.98434 * 8 6 5 10 10 H 1.08991 * 113.69108 * 89.12542 * 9 8 6 11 11 N 1.46498 * 113.61459 * 220.02439 * 9 8 6 12 12 C 1.34781 * 119.99962 * 252.49317 * 11 9 8 13 13 O 1.21284 * 119.99655 * 0.02562 * 12 11 9 14 14 C 1.50697 * 120.00408 * 179.97438 * 12 11 9 15 15 C 1.53001 * 109.47265 * 180.02562 * 14 12 11 16 16 O 1.42901 * 109.47022 * 179.97438 * 15 14 12 17 17 C 1.35897 * 117.00049 * 180.02562 * 16 15 14 18 18 C 1.38707 * 120.05728 * 180.02562 * 17 16 15 19 19 C 1.38172 * 119.94457 * 180.02562 * 18 17 16 20 20 C 1.50696 * 119.97101 * 179.97438 * 19 18 17 21 21 O 1.42898 * 109.46949 * 64.98112 * 20 19 18 22 22 Si 1.86300 * 109.47178 * 184.97899 * 20 19 18 23 23 C 1.38241 * 120.05236 * 359.97438 * 19 18 17 24 24 C 1.38288 * 120.11556 * 359.97438 * 23 19 18 25 25 C 1.38119 * 120.05366 * 0.28328 * 24 23 19 26 26 C 1.53783 * 113.61674 * 185.00156 * 6 5 3 27 27 H 1.08999 * 109.46856 * 60.00362 * 1 2 3 28 28 H 1.09001 * 109.47156 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.47650 * 300.00072 * 1 2 3 30 30 H 1.09003 * 109.47413 * 60.00297 * 5 3 2 31 31 H 1.08997 * 109.47501 * 300.00101 * 5 3 2 32 32 H 1.09007 * 113.61410 * 25.43531 * 8 6 5 33 33 H 1.08997 * 113.61810 * 254.53495 * 8 6 5 34 34 H 0.97003 * 120.00767 * 72.49207 * 11 9 8 35 35 H 1.08997 * 109.47103 * 60.00123 * 14 12 11 36 36 H 1.09005 * 109.46821 * 299.99997 * 14 12 11 37 37 H 1.09005 * 109.46978 * 60.00214 * 15 14 12 38 38 H 1.08996 * 109.47191 * 299.99943 * 15 14 12 39 39 H 1.07998 * 120.02676 * 0.04220 * 18 17 16 40 40 H 1.09000 * 109.47732 * 304.98426 * 20 19 18 41 41 H 0.96700 * 114.00504 * 60.00043 * 21 20 19 42 42 H 1.48502 * 109.99699 * 58.68387 * 22 20 19 43 43 H 1.48498 * 110.00216 * 180.02562 * 22 20 19 44 44 H 1.08006 * 119.93966 * 180.02562 * 23 19 18 45 45 H 1.08002 * 119.96980 * 179.97438 * 24 23 19 46 46 H 1.07998 * 120.02956 * 179.72220 * 25 24 23 47 47 H 1.09001 * 113.61552 * 105.47179 * 26 6 5 48 48 H 1.09000 * 113.61345 * 334.56856 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2092 0.0005 5 6 3.5663 1.2748 0.0006 6 6 4.0002 2.7420 -0.0002 7 1 3.4253 3.3531 -0.6960 8 6 4.1154 3.3511 1.4072 9 6 5.3811 4.0677 0.9079 10 1 5.1851 5.0423 0.4612 11 7 6.4641 4.1011 1.8939 12 6 6.7742 5.2561 2.5154 13 8 6.1563 6.2677 2.2588 14 6 7.8878 5.2905 3.5301 15 6 8.0320 6.7104 4.0813 16 8 9.0877 6.7428 5.0439 17 6 9.3479 7.9389 5.6342 18 6 10.3595 8.0426 6.5775 19 6 10.6217 9.2598 7.1767 20 6 11.7202 9.3730 8.2020 21 8 12.9809 9.1176 7.5795 22 14 11.7209 11.0903 8.9243 23 6 9.8771 10.3737 6.8362 24 6 8.8687 10.2731 5.8953 25 6 8.5992 9.0576 5.2974 26 6 5.5210 2.9346 -0.1225 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8899 30 1 3.9564 0.7805 -0.8892 31 1 3.9557 0.7808 0.8908 32 1 4.3095 2.6147 2.1871 33 1 3.2997 4.0293 1.6576 34 1 6.9581 3.2920 2.0995 35 1 8.8213 4.9881 3.0555 36 1 7.6569 4.6059 4.3464 37 1 7.0984 7.0124 4.5561 38 1 8.2627 7.3952 3.2653 39 1 10.9419 7.1728 6.8433 40 1 11.5529 8.6450 8.9958 41 1 13.1963 9.7289 6.8619 42 1 10.4042 11.3799 9.5468 43 1 12.8003 11.2151 9.9366 44 1 10.0839 11.3243 7.3054 45 1 8.2882 11.1448 5.6314 46 1 7.8086 8.9785 4.5659 47 1 5.8400 3.2768 -1.1070 48 1 6.0993 2.0844 0.2392 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:26:48 Heat of formation + Delta-G solvation = -142.491912 kcal Electronic energy + Delta-G solvation = -29083.240428 eV Core-core repulsion = 24685.058749 eV Total energy + Delta-G solvation = -4398.181679 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -41.75023 -41.33867 -40.95176 -39.63315 -38.98393 -37.42522 -37.22201 -34.89217 -33.33407 -32.42113 -31.64925 -30.71430 -28.49482 -27.03841 -26.86608 -25.87521 -24.08558 -23.62318 -22.17179 -21.72732 -21.55568 -20.59798 -19.30204 -18.57844 -18.11654 -17.95452 -17.62708 -17.55533 -17.46486 -17.08996 -17.03562 -16.75814 -16.27478 -16.13958 -15.92283 -15.38091 -15.02696 -14.93642 -14.76211 -14.51665 -14.35824 -14.19429 -14.08727 -13.78988 -13.68243 -13.48097 -13.23399 -13.05773 -12.97040 -12.83731 -12.80317 -12.35809 -12.23268 -11.97924 -11.94470 -11.79297 -11.78827 -11.59159 -11.51393 -11.39248 -10.96058 -10.45289 -10.13972 -9.88374 -9.20140 -5.00455 0.25973 0.45196 1.20871 1.29815 1.49344 1.63977 1.67107 1.75426 1.99765 2.47202 2.72242 3.28359 3.31763 3.48073 3.50217 3.59634 3.65954 3.68065 3.79774 3.83557 3.84675 3.92448 4.08567 4.14666 4.15321 4.20906 4.24287 4.25664 4.30168 4.35301 4.37397 4.50881 4.52725 4.57484 4.58317 4.61453 4.64203 4.70950 4.72919 4.87827 4.97488 5.01551 5.15767 5.30920 5.39221 5.42168 5.45461 5.48513 5.72697 6.32732 6.41309 6.58808 6.74028 7.07977 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.147 4.147 9 C 0.122 3.878 10 H 0.119 0.881 11 N -0.719 5.719 12 C 0.521 3.479 13 O -0.537 6.537 14 C -0.142 4.142 15 C 0.074 3.926 16 O -0.316 6.316 17 C 0.133 3.867 18 C -0.126 4.126 19 C -0.083 4.083 20 C -0.069 4.069 21 O -0.539 6.539 22 Si 0.690 3.310 23 C -0.154 4.154 24 C -0.073 4.073 25 C -0.202 4.202 26 C -0.140 4.140 27 H 0.064 0.936 28 H 0.103 0.897 29 H 0.063 0.937 30 H 0.110 0.890 31 H 0.108 0.892 32 H 0.086 0.914 33 H 0.077 0.923 34 H 0.403 0.597 35 H 0.108 0.892 36 H 0.107 0.893 37 H 0.072 0.928 38 H 0.073 0.927 39 H 0.133 0.867 40 H 0.115 0.885 41 H 0.379 0.621 42 H -0.258 1.258 43 H -0.255 1.255 44 H 0.128 0.872 45 H 0.131 0.869 46 H 0.133 0.867 47 H 0.081 0.919 48 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.105 -3.342 -2.789 4.491 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.186 4.186 9 C 0.018 3.982 10 H 0.136 0.864 11 N -0.370 5.370 12 C 0.307 3.693 13 O -0.414 6.414 14 C -0.182 4.182 15 C -0.001 4.001 16 O -0.230 6.230 17 C 0.087 3.913 18 C -0.144 4.144 19 C -0.083 4.083 20 C -0.180 4.180 21 O -0.344 6.344 22 Si 0.592 3.408 23 C -0.172 4.172 24 C -0.091 4.091 25 C -0.221 4.221 26 C -0.178 4.178 27 H 0.083 0.917 28 H 0.121 0.879 29 H 0.082 0.918 30 H 0.128 0.872 31 H 0.126 0.874 32 H 0.104 0.896 33 H 0.096 0.904 34 H 0.238 0.762 35 H 0.126 0.874 36 H 0.125 0.875 37 H 0.091 0.909 38 H 0.091 0.909 39 H 0.151 0.849 40 H 0.132 0.868 41 H 0.227 0.773 42 H -0.182 1.182 43 H -0.180 1.180 44 H 0.146 0.854 45 H 0.149 0.851 46 H 0.150 0.850 47 H 0.100 0.900 48 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 0.443 -2.489 -1.777 3.090 hybrid contribution -0.539 -0.998 -0.039 1.135 sum -0.096 -3.487 -1.816 3.933 Atomic orbital electron populations 1.23301 0.75919 1.03944 1.02716 1.86504 1.23809 1.33537 1.84078 1.23814 0.92303 0.81398 0.72406 1.90697 1.67232 1.36317 1.44792 1.21404 0.87629 0.98850 1.06109 1.22255 0.96173 0.94201 0.99206 0.87402 1.23565 0.98355 1.00186 0.96463 1.22514 0.86497 0.99952 0.89266 0.86363 1.45942 1.36949 1.11506 1.42565 1.20336 0.84019 0.83415 0.81485 1.90756 1.52862 1.33491 1.64268 1.21480 0.99171 0.98433 0.99120 1.22419 0.89748 0.96805 0.91155 1.85973 1.53014 1.29535 1.54511 1.18959 0.94701 0.84390 0.93220 1.20243 0.98040 0.98469 0.97679 1.20124 0.97288 0.93077 0.97813 1.25102 0.83093 1.12647 0.97135 1.86511 1.34261 1.59746 1.53893 0.94646 0.80981 0.80227 0.84927 1.20907 0.98207 0.97634 1.00423 1.20934 0.96306 0.97143 0.94727 1.21399 1.02906 0.93166 1.04624 1.23432 0.95737 0.98496 1.00098 0.91746 0.87907 0.91783 0.87155 0.87419 0.89578 0.90381 0.76171 0.87400 0.87480 0.90949 0.90861 0.84885 0.86811 0.77318 1.18233 1.17961 0.85424 0.85125 0.84957 0.89993 0.89033 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.32 10.57 -39.25 -0.41 -0.74 16 3 C 0.46 0.46 7.96 36.00 0.29 0.75 16 4 O -0.50 -2.09 15.51 -18.75 -0.29 -2.38 16 5 C -0.10 0.27 5.65 -27.89 -0.16 0.12 16 6 C -0.10 0.20 3.15 -89.80 -0.28 -0.08 16 7 H 0.11 -0.05 7.68 -51.93 -0.40 -0.45 16 8 C -0.15 0.17 7.43 -25.92 -0.19 -0.02 16 9 C 0.12 -0.18 4.24 -67.12 -0.28 -0.46 16 10 H 0.12 0.07 7.46 -51.93 -0.39 -0.31 16 11 N -0.72 1.60 5.35 -53.02 -0.28 1.32 16 12 C 0.52 0.11 7.83 -10.98 -0.09 0.03 16 13 O -0.54 -2.36 15.58 5.55 0.09 -2.28 16 14 C -0.14 0.26 6.07 -27.88 -0.17 0.09 16 15 C 0.07 0.03 4.03 37.16 0.15 0.18 16 16 O -0.32 -0.65 10.14 -19.42 -0.20 -0.84 16 17 C 0.13 0.32 6.69 -39.22 -0.26 0.06 16 18 C -0.13 -0.28 9.62 -39.43 -0.38 -0.66 16 19 C -0.08 -0.09 5.35 -104.65 -0.56 -0.65 16 20 C -0.07 -0.03 2.80 36.00 0.10 0.07 16 21 O -0.54 -0.42 12.83 -35.23 -0.45 -0.88 16 22 Si 0.69 -0.44 29.80 -169.99 -5.07 -5.51 16 23 C -0.15 -0.04 8.67 -39.56 -0.34 -0.39 16 24 C -0.07 -0.04 10.04 -39.61 -0.40 -0.43 16 25 C -0.20 -0.30 9.04 -39.43 -0.36 -0.65 16 26 C -0.14 0.50 7.39 -25.91 -0.19 0.31 16 27 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 28 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.11 -0.48 8.14 -51.93 -0.42 -0.90 16 31 H 0.11 -0.46 7.84 -51.93 -0.41 -0.87 16 32 H 0.09 -0.19 7.90 -51.92 -0.41 -0.60 16 33 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 34 H 0.40 -2.07 8.73 -40.82 -0.36 -2.42 16 35 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 36 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 37 H 0.07 0.07 7.61 -51.93 -0.40 -0.33 16 38 H 0.07 0.05 7.63 -51.93 -0.40 -0.34 16 39 H 0.13 0.28 8.06 -52.49 -0.42 -0.14 16 40 H 0.11 0.09 7.96 -51.93 -0.41 -0.33 16 41 H 0.38 -1.17 8.70 45.56 0.40 -0.78 16 42 H -0.26 -0.46 7.11 56.52 0.40 -0.06 16 43 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 44 H 0.13 -0.23 4.90 -52.48 -0.26 -0.49 16 45 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 46 H 0.13 0.07 6.30 -52.49 -0.33 -0.26 16 47 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 48 H 0.09 -0.48 8.08 -51.93 -0.42 -0.90 16 LS Contribution 402.52 15.07 6.07 6.07 Total: 0.00 -10.43 402.52 -9.81 -20.24 By element: Atomic # 1 Polarization: -7.10 SS G_CDS: -7.20 Total: -14.30 kcal Atomic # 6 Polarization: 1.36 SS G_CDS: -2.06 Total: -0.70 kcal Atomic # 7 Polarization: 1.60 SS G_CDS: -0.28 Total: 1.32 kcal Atomic # 8 Polarization: -5.84 SS G_CDS: -1.27 Total: -7.11 kcal Atomic # 14 Polarization: -0.44 SS G_CDS: -5.07 Total: -5.51 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -10.43 -9.81 -20.24 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.256 kcal (2) G-P(sol) polarization free energy of solvation -10.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.681 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.811 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.236 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.492 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds