Wall clock time and date at job start Sun Mar 7 2021 14:26:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34229 * 117.00179 * 2 1 4 4 O 1.20823 * 119.99594 * 0.02562 * 3 2 1 5 5 C 1.50693 * 119.99974 * 179.97438 * 3 2 1 6 6 C 1.53001 * 109.47193 * 179.97438 * 5 3 2 7 7 H 1.08999 * 112.85246 * 316.20167 * 6 5 3 8 8 C 1.53783 * 113.61487 * 87.50295 * 6 5 3 9 9 C 1.53779 * 87.08341 * 139.98434 * 8 6 5 10 10 H 1.08991 * 113.69108 * 89.12542 * 9 8 6 11 11 N 1.46498 * 113.61459 * 220.02439 * 9 8 6 12 12 C 1.34781 * 119.99962 * 252.49317 * 11 9 8 13 13 O 1.21284 * 119.99655 * 0.02562 * 12 11 9 14 14 C 1.50697 * 120.00408 * 179.97438 * 12 11 9 15 15 C 1.53001 * 109.47265 * 180.02562 * 14 12 11 16 16 O 1.42901 * 109.47022 * 179.97438 * 15 14 12 17 17 C 1.35897 * 117.00049 * 180.02562 * 16 15 14 18 18 C 1.38707 * 120.05728 * 180.02562 * 17 16 15 19 19 C 1.38172 * 119.94457 * 180.02562 * 18 17 16 20 20 C 1.50696 * 119.97101 * 179.97438 * 19 18 17 21 21 O 1.42898 * 109.46949 * 64.98112 * 20 19 18 22 22 Si 1.86300 * 109.47178 * 184.97899 * 20 19 18 23 23 C 1.38241 * 120.05236 * 359.97438 * 19 18 17 24 24 C 1.38288 * 120.11556 * 359.97438 * 23 19 18 25 25 C 1.38119 * 120.05366 * 0.28328 * 24 23 19 26 26 C 1.53783 * 113.61674 * 185.00156 * 6 5 3 27 27 H 1.08999 * 109.46856 * 60.00362 * 1 2 3 28 28 H 1.09001 * 109.47156 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.47650 * 300.00072 * 1 2 3 30 30 H 1.09003 * 109.47413 * 60.00297 * 5 3 2 31 31 H 1.08997 * 109.47501 * 300.00101 * 5 3 2 32 32 H 1.09007 * 113.61410 * 25.43531 * 8 6 5 33 33 H 1.08997 * 113.61810 * 254.53495 * 8 6 5 34 34 H 0.97003 * 120.00767 * 72.49207 * 11 9 8 35 35 H 1.08997 * 109.47103 * 60.00123 * 14 12 11 36 36 H 1.09005 * 109.46821 * 299.99997 * 14 12 11 37 37 H 1.09005 * 109.46978 * 60.00214 * 15 14 12 38 38 H 1.08996 * 109.47191 * 299.99943 * 15 14 12 39 39 H 1.07998 * 120.02676 * 0.04220 * 18 17 16 40 40 H 1.09000 * 109.47732 * 304.98426 * 20 19 18 41 41 H 0.96700 * 114.00504 * 60.00043 * 21 20 19 42 42 H 1.48502 * 109.99699 * 58.68387 * 22 20 19 43 43 H 1.48498 * 110.00216 * 180.02562 * 22 20 19 44 44 H 1.08006 * 119.93966 * 180.02562 * 23 19 18 45 45 H 1.08002 * 119.96980 * 179.97438 * 24 23 19 46 46 H 1.07998 * 120.02956 * 179.72220 * 25 24 23 47 47 H 1.09001 * 113.61552 * 105.47179 * 26 6 5 48 48 H 1.09000 * 113.61345 * 334.56856 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2092 0.0005 5 6 3.5663 1.2748 0.0006 6 6 4.0002 2.7420 -0.0002 7 1 3.4253 3.3531 -0.6960 8 6 4.1154 3.3511 1.4072 9 6 5.3811 4.0677 0.9079 10 1 5.1851 5.0423 0.4612 11 7 6.4641 4.1011 1.8939 12 6 6.7742 5.2561 2.5154 13 8 6.1563 6.2677 2.2588 14 6 7.8878 5.2905 3.5301 15 6 8.0320 6.7104 4.0813 16 8 9.0877 6.7428 5.0439 17 6 9.3479 7.9389 5.6342 18 6 10.3595 8.0426 6.5775 19 6 10.6217 9.2598 7.1767 20 6 11.7202 9.3730 8.2020 21 8 12.9809 9.1176 7.5795 22 14 11.7209 11.0903 8.9243 23 6 9.8771 10.3737 6.8362 24 6 8.8687 10.2731 5.8953 25 6 8.5992 9.0576 5.2974 26 6 5.5210 2.9346 -0.1225 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8899 30 1 3.9564 0.7805 -0.8892 31 1 3.9557 0.7808 0.8908 32 1 4.3095 2.6147 2.1871 33 1 3.2997 4.0293 1.6576 34 1 6.9581 3.2920 2.0995 35 1 8.8213 4.9881 3.0555 36 1 7.6569 4.6059 4.3464 37 1 7.0984 7.0124 4.5561 38 1 8.2627 7.3952 3.2653 39 1 10.9419 7.1728 6.8433 40 1 11.5529 8.6450 8.9958 41 1 13.1963 9.7289 6.8619 42 1 10.4042 11.3799 9.5468 43 1 12.8003 11.2151 9.9366 44 1 10.0839 11.3243 7.3054 45 1 8.2882 11.1448 5.6314 46 1 7.8086 8.9785 4.5659 47 1 5.8400 3.2768 -1.1070 48 1 6.0993 2.0844 0.2392 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:26:46 Heat of formation + Delta-G solvation = -143.179242 kcal Electronic energy + Delta-G solvation = -29083.270233 eV Core-core repulsion = 24685.058749 eV Total energy + Delta-G solvation = -4398.211484 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -41.74940 -41.40158 -40.97747 -39.60611 -39.03651 -37.51489 -37.26246 -34.88101 -33.31093 -32.47804 -31.56815 -30.74513 -28.43520 -27.07581 -26.69849 -25.87221 -24.04359 -23.68452 -22.20759 -21.72009 -21.52932 -20.47095 -19.34804 -18.60999 -18.11483 -17.94742 -17.66451 -17.57786 -17.48996 -17.11503 -17.00975 -16.78396 -16.26374 -16.12127 -15.95499 -15.41897 -14.96872 -14.91145 -14.77529 -14.50324 -14.41654 -14.22610 -14.14288 -13.80002 -13.48445 -13.37041 -13.24103 -12.98576 -12.92040 -12.84294 -12.76059 -12.38845 -12.15161 -12.04945 -11.88226 -11.82728 -11.82436 -11.64303 -11.48599 -11.33764 -11.01040 -10.48565 -10.08072 -9.96073 -9.28885 -4.98169 0.18165 0.37478 1.16934 1.29865 1.49616 1.65627 1.68802 1.79997 1.97623 2.51191 2.64979 3.43300 3.48004 3.50423 3.56082 3.66321 3.75503 3.79692 3.83712 3.88288 3.90333 3.97199 4.08150 4.21945 4.24496 4.25907 4.26608 4.30517 4.38886 4.46936 4.49382 4.61005 4.62399 4.66603 4.68012 4.74391 4.74742 4.80839 4.85788 4.96135 5.01683 5.09239 5.24085 5.26747 5.36485 5.40613 5.42295 5.58280 5.68937 6.30918 6.48120 6.70525 6.76058 7.17005 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.453 3.547 4 O -0.545 6.545 5 C -0.096 4.096 6 C -0.099 4.099 7 H 0.084 0.916 8 C -0.148 4.148 9 C 0.115 3.885 10 H 0.090 0.910 11 N -0.702 5.702 12 C 0.518 3.482 13 O -0.588 6.588 14 C -0.132 4.132 15 C 0.074 3.926 16 O -0.324 6.324 17 C 0.116 3.884 18 C -0.142 4.142 19 C -0.085 4.085 20 C -0.077 4.077 21 O -0.555 6.555 22 Si 0.784 3.216 23 C -0.155 4.155 24 C -0.075 4.075 25 C -0.212 4.212 26 C -0.117 4.117 27 H 0.058 0.942 28 H 0.128 0.872 29 H 0.057 0.943 30 H 0.136 0.864 31 H 0.133 0.867 32 H 0.103 0.897 33 H 0.045 0.955 34 H 0.421 0.579 35 H 0.129 0.871 36 H 0.126 0.874 37 H 0.062 0.938 38 H 0.066 0.934 39 H 0.127 0.873 40 H 0.106 0.894 41 H 0.396 0.604 42 H -0.286 1.286 43 H -0.298 1.298 44 H 0.151 0.849 45 H 0.153 0.847 46 H 0.135 0.865 47 H 0.085 0.915 48 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.315 -4.528 -3.005 5.907 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.284 6.284 3 C 0.298 3.702 4 O -0.435 6.435 5 C -0.133 4.133 6 C -0.118 4.118 7 H 0.103 0.897 8 C -0.187 4.187 9 C 0.010 3.990 10 H 0.108 0.892 11 N -0.354 5.354 12 C 0.306 3.694 13 O -0.468 6.468 14 C -0.172 4.172 15 C -0.002 4.002 16 O -0.238 6.238 17 C 0.071 3.929 18 C -0.160 4.160 19 C -0.085 4.085 20 C -0.187 4.187 21 O -0.363 6.363 22 Si 0.690 3.310 23 C -0.173 4.173 24 C -0.093 4.093 25 C -0.231 4.231 26 C -0.155 4.155 27 H 0.077 0.923 28 H 0.146 0.854 29 H 0.076 0.924 30 H 0.153 0.847 31 H 0.151 0.849 32 H 0.121 0.879 33 H 0.064 0.936 34 H 0.260 0.740 35 H 0.147 0.853 36 H 0.144 0.856 37 H 0.080 0.920 38 H 0.084 0.916 39 H 0.145 0.855 40 H 0.124 0.876 41 H 0.246 0.754 42 H -0.213 1.213 43 H -0.226 1.226 44 H 0.168 0.832 45 H 0.171 0.829 46 H 0.153 0.847 47 H 0.104 0.896 48 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 1.673 -3.742 -2.029 4.573 hybrid contribution -0.952 -0.649 0.054 1.153 sum 0.721 -4.390 -1.976 4.868 Atomic orbital electron populations 1.23469 0.75390 1.05453 1.02196 1.86510 1.24533 1.33515 1.83811 1.24632 0.93740 0.80781 0.71001 1.90685 1.68399 1.37565 1.46857 1.21544 0.84843 0.98456 1.08423 1.22157 0.97286 0.94497 0.97878 0.89721 1.23586 0.97357 1.00099 0.97635 1.22441 0.86836 0.99545 0.90197 0.89229 1.45818 1.36386 1.11602 1.41555 1.20703 0.83942 0.83250 0.81519 1.90740 1.54719 1.35363 1.65973 1.21443 0.99265 0.97322 0.99136 1.22441 0.88894 0.98287 0.90558 1.85950 1.53427 1.29611 1.54812 1.19148 0.95194 0.84846 0.93694 1.20332 0.98440 0.98919 0.98348 1.20249 0.97512 0.93010 0.97750 1.25292 0.82876 1.13602 0.96910 1.86471 1.34256 1.60825 1.54727 0.93578 0.77001 0.77898 0.82563 1.21171 0.97701 0.98232 1.00149 1.21258 0.96341 0.97468 0.94258 1.21553 1.03040 0.93492 1.04990 1.23360 0.94501 0.98102 0.99504 0.92270 0.85393 0.92388 0.84657 0.84867 0.87912 0.93613 0.74034 0.85283 0.85604 0.92007 0.91612 0.85473 0.87627 0.75421 1.21278 1.22572 0.83226 0.82908 0.84700 0.89591 0.86017 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.60 10.57 -51.40 -0.54 -1.15 16 3 C 0.45 1.06 7.96 71.23 0.57 1.63 16 4 O -0.55 -5.53 15.51 21.97 0.34 -5.19 16 5 C -0.10 0.64 5.65 29.85 0.17 0.81 16 6 C -0.10 0.40 3.15 -10.27 -0.03 0.37 16 7 H 0.08 0.07 7.68 -2.39 -0.02 0.05 16 8 C -0.15 0.24 7.43 31.12 0.23 0.47 16 9 C 0.11 -0.27 4.24 45.52 0.19 -0.08 16 10 H 0.09 0.34 7.46 -2.39 -0.02 0.32 16 11 N -0.70 3.49 5.35 -440.04 -2.36 1.13 16 12 C 0.52 0.51 7.83 87.66 0.69 1.20 16 13 O -0.59 -6.43 15.58 -3.04 -0.05 -6.47 16 14 C -0.13 0.51 6.07 29.85 0.18 0.69 16 15 C 0.07 0.15 4.03 71.98 0.29 0.44 16 16 O -0.32 -1.63 10.14 -92.39 -0.94 -2.57 16 17 C 0.12 0.69 6.69 22.51 0.15 0.84 16 18 C -0.14 -0.77 9.62 22.37 0.22 -0.56 16 19 C -0.08 -0.20 5.35 -19.88 -0.11 -0.31 16 20 C -0.08 -0.07 2.80 71.23 0.20 0.13 16 21 O -0.55 -0.88 12.83 -148.98 -1.91 -2.79 16 22 Si 0.78 -1.30 29.80 68.60 2.04 0.74 16 23 C -0.16 0.01 8.67 22.28 0.19 0.20 16 24 C -0.08 -0.05 10.04 22.25 0.22 0.18 16 25 C -0.21 -0.79 9.04 22.37 0.20 -0.59 16 26 C -0.12 1.01 7.39 31.12 0.23 1.24 16 27 H 0.06 -0.01 8.13 -2.39 -0.02 -0.03 16 28 H 0.13 -0.87 8.14 -2.39 -0.02 -0.88 16 29 H 0.06 0.00 8.13 -2.39 -0.02 -0.02 16 30 H 0.14 -1.52 8.14 -2.39 -0.02 -1.54 16 31 H 0.13 -1.52 7.84 -2.39 -0.02 -1.54 16 32 H 0.10 -0.53 7.90 -2.38 -0.02 -0.55 16 33 H 0.04 0.23 8.14 -2.39 -0.02 0.21 16 34 H 0.42 -5.19 8.73 -92.71 -0.81 -6.00 16 35 H 0.13 -1.03 8.14 -2.39 -0.02 -1.04 16 36 H 0.13 -0.94 8.14 -2.38 -0.02 -0.96 16 37 H 0.06 0.23 7.61 -2.38 -0.02 0.22 16 38 H 0.07 0.21 7.63 -2.39 -0.02 0.19 16 39 H 0.13 0.73 8.06 -2.91 -0.02 0.71 16 40 H 0.11 0.24 7.96 -2.39 -0.02 0.22 16 41 H 0.40 -2.63 8.70 -74.06 -0.64 -3.27 16 42 H -0.29 -0.89 7.11 99.48 0.71 -0.19 16 43 H -0.30 -1.66 7.11 99.48 0.71 -0.95 16 44 H 0.15 -0.77 4.90 -2.91 -0.01 -0.78 16 45 H 0.15 -0.66 8.06 -2.91 -0.02 -0.69 16 46 H 0.14 0.34 6.30 -2.91 -0.02 0.32 16 47 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 48 H 0.12 -1.73 8.08 -2.39 -0.02 -1.75 16 Total: 0.00 -28.14 402.52 0.96 -27.18 By element: Atomic # 1 Polarization: -18.28 SS G_CDS: -0.42 Total: -18.70 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: 4.79 Total: 7.81 kcal Atomic # 7 Polarization: 3.49 SS G_CDS: -2.36 Total: 1.13 kcal Atomic # 8 Polarization: -15.07 SS G_CDS: -3.10 Total: -18.17 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: 2.04 Total: 0.74 kcal Total: -28.14 0.96 -27.18 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.995 kcal (2) G-P(sol) polarization free energy of solvation -28.140 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.136 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.956 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.184 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.179 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds