Wall clock time and date at job start Sun Mar 7 2021 14:26:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34233 * 117.00324 * 2 1 4 4 O 1.20832 * 119.99611 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00499 * 180.02562 * 3 2 1 6 6 C 1.52994 * 109.47153 * 180.02562 * 5 3 2 7 7 H 1.08998 * 112.85056 * 316.18892 * 6 5 3 8 8 C 1.53778 * 113.61773 * 87.50546 * 6 5 3 9 9 C 1.53775 * 87.08618 * 139.97767 * 8 6 5 10 10 H 1.09002 * 113.68942 * 89.12135 * 9 8 6 11 11 N 1.46500 * 113.61602 * 220.01713 * 9 8 6 12 12 C 1.34768 * 120.00015 * 252.49699 * 11 9 8 13 13 O 1.21283 * 120.00373 * 359.97438 * 12 11 9 14 14 C 1.50703 * 120.00287 * 179.97438 * 12 11 9 15 15 C 1.52998 * 109.47564 * 179.97438 * 14 12 11 16 16 C 1.52998 * 109.47242 * 180.02562 * 15 14 12 17 17 O 1.42901 * 109.47046 * 179.97438 * 16 15 14 18 18 C 1.35905 * 116.99604 * 179.97438 * 17 16 15 19 19 C 1.38715 * 120.05074 * 179.72595 * 18 17 16 20 20 C 1.38162 * 119.94011 * 179.76847 * 19 18 17 21 21 C 1.50704 * 119.97090 * 180.23424 * 20 19 18 22 22 O 1.42899 * 109.46850 * 300.25251 * 21 20 19 23 23 Si 1.86303 * 109.47105 * 180.25482 * 21 20 19 24 24 C 1.38246 * 120.05734 * 0.48556 * 20 19 18 25 25 C 1.38283 * 120.11014 * 359.76698 * 24 20 19 26 26 C 1.38121 * 120.05809 * 0.02562 * 25 24 20 27 27 C 1.53784 * 87.07916 * 334.56586 * 9 8 6 28 28 H 1.08998 * 109.46976 * 59.99639 * 1 2 3 29 29 H 1.08994 * 109.47183 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.46945 * 300.00384 * 1 2 3 31 31 H 1.08999 * 109.46822 * 59.99747 * 5 3 2 32 32 H 1.09004 * 109.46491 * 299.99792 * 5 3 2 33 33 H 1.08997 * 113.61346 * 25.42454 * 8 6 5 34 34 H 1.09008 * 113.61047 * 254.53046 * 8 6 5 35 35 H 0.97004 * 119.99762 * 72.49834 * 11 9 8 36 36 H 1.09004 * 109.46598 * 60.00015 * 14 12 11 37 37 H 1.09004 * 109.47086 * 300.00583 * 14 12 11 38 38 H 1.08998 * 109.46945 * 59.99676 * 15 14 12 39 39 H 1.09007 * 109.46896 * 299.99923 * 15 14 12 40 40 H 1.08996 * 109.47090 * 59.99784 * 16 15 14 41 41 H 1.08999 * 109.47084 * 299.99957 * 16 15 14 42 42 H 1.07998 * 120.02995 * 0.02562 * 19 18 17 43 43 H 1.08997 * 109.47174 * 60.25079 * 21 20 19 44 44 H 0.96707 * 113.99961 * 299.99494 * 22 21 20 45 45 H 1.48499 * 109.99897 * 180.02562 * 23 21 20 46 46 H 1.48507 * 109.99860 * 301.31438 * 23 21 20 47 47 H 1.08001 * 119.94242 * 179.74564 * 24 20 19 48 48 H 1.08007 * 119.97266 * 179.97438 * 25 24 20 49 49 H 1.07994 * 120.03028 * 179.97438 * 26 25 24 50 50 H 1.09001 * 113.61179 * 139.97835 * 27 9 8 51 51 H 1.09001 * 113.61596 * 270.87998 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2094 0.0005 5 6 3.5664 1.2749 -0.0006 6 6 4.0001 2.7421 0.0002 7 1 3.4248 3.3539 -0.6945 8 6 4.1166 3.3493 1.4082 9 6 5.3819 4.0666 0.9088 10 1 5.1855 5.0418 0.4634 11 7 6.4657 4.0988 1.8940 12 6 6.7761 5.2530 2.5166 13 8 6.1586 6.2651 2.2611 14 6 7.8906 5.2862 3.5305 15 6 8.0360 6.7057 4.0825 16 6 9.1679 6.7394 5.1113 17 8 9.3041 8.0654 5.6264 18 6 10.2720 8.2688 6.5585 19 6 10.4633 9.5328 7.0969 20 6 11.4447 9.7359 8.0479 21 6 11.6496 11.1078 8.6372 22 8 11.9755 12.0299 7.5953 23 14 13.0417 11.0508 9.8739 24 6 12.2424 8.6830 8.4556 25 6 12.0571 7.4231 7.9165 26 6 11.0745 7.2138 6.9686 27 6 5.5209 2.9348 -0.1231 28 1 -0.3633 0.5139 -0.8899 29 1 -0.3633 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8900 31 1 3.9557 0.7809 -0.8908 32 1 3.9564 0.7806 0.8892 33 1 4.3112 2.6120 2.1870 34 1 3.3010 4.0273 1.6601 35 1 6.9598 3.2894 2.0981 36 1 8.8237 4.9844 3.0546 37 1 7.6604 4.6006 4.3461 38 1 7.1030 7.0079 4.5581 39 1 8.2666 7.3909 3.2666 40 1 10.1007 6.4373 4.6352 41 1 8.9379 6.0542 5.9271 42 1 9.8428 10.3565 6.7761 43 1 10.7347 11.4299 9.1344 44 1 12.7805 11.8052 7.1087 45 1 13.2534 12.3976 10.4627 46 1 12.7290 10.0718 10.9459 47 1 13.0117 8.8448 9.1961 48 1 12.6819 6.6022 8.2363 49 1 10.9305 6.2298 6.5476 50 1 5.8390 3.2782 -1.1075 51 1 6.0995 2.0842 0.2370 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_4549616.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:26:51 Heat of formation + Delta-G solvation = -148.507724 kcal Electronic energy + Delta-G solvation = -30617.148895 eV Core-core repulsion = 26063.168731 eV Total energy + Delta-G solvation = -4553.980163 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -41.71315 -41.27492 -40.98151 -39.58184 -39.09656 -37.41653 -37.26025 -34.91535 -34.79531 -32.43392 -31.75599 -31.15582 -28.75679 -28.18382 -26.84043 -26.80942 -24.79949 -23.68451 -23.24235 -21.94040 -21.72724 -21.51768 -20.56882 -19.16845 -18.57530 -18.12973 -17.90639 -17.74545 -17.55595 -17.49438 -17.17682 -16.95055 -16.79016 -16.40039 -16.21213 -16.05924 -15.37550 -15.11519 -15.10298 -14.77169 -14.58040 -14.49306 -14.21158 -14.12889 -13.88647 -13.68184 -13.53252 -13.38747 -13.33668 -13.03730 -12.98487 -12.85808 -12.73723 -12.39954 -12.24472 -12.19915 -11.95040 -11.89705 -11.78029 -11.66987 -11.58398 -11.48732 -11.37667 -10.83375 -10.47795 -10.07043 -9.88485 -9.20710 -5.01965 0.23607 0.43965 1.21798 1.29438 1.60163 1.64881 1.69215 1.89335 1.99930 2.35165 2.70634 3.30937 3.34041 3.47128 3.53191 3.63217 3.65687 3.69650 3.78480 3.80625 3.83067 3.89613 4.01944 4.10284 4.15406 4.17356 4.18742 4.21576 4.22179 4.26690 4.26732 4.38561 4.40101 4.43120 4.52763 4.56731 4.58400 4.65007 4.66437 4.75299 4.90631 4.95381 4.99958 5.00316 5.14748 5.20873 5.30332 5.39267 5.40901 5.46559 5.50386 5.72162 6.42252 6.43923 6.59259 6.74981 7.19554 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.100 4.100 7 H 0.108 0.892 8 C -0.147 4.147 9 C 0.122 3.878 10 H 0.118 0.882 11 N -0.722 5.722 12 C 0.514 3.486 13 O -0.533 6.533 14 C -0.138 4.138 15 C -0.106 4.106 16 C 0.060 3.940 17 O -0.311 6.311 18 C 0.133 3.867 19 C -0.126 4.126 20 C -0.080 4.080 21 C -0.070 4.070 22 O -0.538 6.538 23 Si 0.694 3.306 24 C -0.157 4.157 25 C -0.073 4.073 26 C -0.206 4.206 27 C -0.140 4.140 28 H 0.064 0.936 29 H 0.102 0.898 30 H 0.063 0.937 31 H 0.110 0.890 32 H 0.107 0.893 33 H 0.085 0.915 34 H 0.077 0.923 35 H 0.401 0.599 36 H 0.098 0.902 37 H 0.098 0.902 38 H 0.083 0.917 39 H 0.084 0.916 40 H 0.064 0.936 41 H 0.064 0.936 42 H 0.134 0.866 43 H 0.115 0.885 44 H 0.379 0.621 45 H -0.255 1.255 46 H -0.258 1.258 47 H 0.128 0.872 48 H 0.130 0.870 49 H 0.129 0.871 50 H 0.081 0.919 51 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.145 -8.832 -0.993 10.270 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.280 6.280 3 C 0.300 3.700 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.119 4.119 7 H 0.126 0.874 8 C -0.186 4.186 9 C 0.017 3.983 10 H 0.136 0.864 11 N -0.374 5.374 12 C 0.301 3.699 13 O -0.409 6.409 14 C -0.178 4.178 15 C -0.144 4.144 16 C -0.015 4.015 17 O -0.225 6.225 18 C 0.087 3.913 19 C -0.145 4.145 20 C -0.081 4.081 21 C -0.181 4.181 22 O -0.344 6.344 23 Si 0.596 3.404 24 C -0.175 4.175 25 C -0.092 4.092 26 C -0.224 4.224 27 C -0.178 4.178 28 H 0.083 0.917 29 H 0.121 0.879 30 H 0.082 0.918 31 H 0.128 0.872 32 H 0.125 0.875 33 H 0.104 0.896 34 H 0.096 0.904 35 H 0.236 0.764 36 H 0.117 0.883 37 H 0.116 0.884 38 H 0.102 0.898 39 H 0.102 0.898 40 H 0.083 0.917 41 H 0.082 0.918 42 H 0.152 0.848 43 H 0.133 0.867 44 H 0.227 0.773 45 H -0.180 1.180 46 H -0.183 1.183 47 H 0.145 0.855 48 H 0.148 0.852 49 H 0.147 0.853 50 H 0.099 0.901 51 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 4.016 -7.239 -0.210 8.281 hybrid contribution -0.640 -0.900 -0.021 1.105 sum 3.376 -8.138 -0.231 8.814 Atomic orbital electron populations 1.23300 0.75927 1.03930 1.02726 1.86504 1.23804 1.33548 1.84096 1.23825 0.92311 0.81396 0.72418 1.90702 1.67231 1.36309 1.44759 1.21404 0.87610 0.98881 1.06062 1.22256 0.96198 0.94164 0.99246 0.87424 1.23559 0.98456 1.00170 0.96384 1.22483 0.86583 0.99857 0.89326 0.86446 1.45995 1.36950 1.11644 1.42776 1.20615 0.84407 0.83218 0.81685 1.90758 1.52691 1.33453 1.63994 1.21538 0.98458 0.99139 0.98683 1.21234 0.98716 0.95913 0.98502 1.22825 0.99443 0.82480 0.96793 1.86092 1.51387 1.31452 1.53559 1.19030 0.88608 0.94094 0.89556 1.20274 1.00309 0.95107 0.98802 1.20145 0.95507 0.95791 0.96652 1.25125 1.08552 0.87155 0.97273 1.86517 1.48763 1.49347 1.49748 0.94633 0.85782 0.80643 0.79379 1.20921 1.00924 0.93205 1.02440 1.20908 0.96497 0.96902 0.94845 1.21308 0.99593 0.98819 1.02716 1.23427 0.95694 0.98532 1.00111 0.91744 0.87915 0.91782 0.87177 0.87457 0.89648 0.90424 0.76411 0.88341 0.88398 0.89814 0.89758 0.91732 0.91815 0.84784 0.86738 0.77321 1.17982 1.18303 0.85457 0.85229 0.85271 0.90056 0.89111 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.35 10.57 -39.27 -0.41 -0.77 16 3 C 0.46 0.52 7.96 36.00 0.29 0.81 16 4 O -0.50 -2.19 15.51 -18.76 -0.29 -2.48 16 5 C -0.10 0.26 5.65 -27.89 -0.16 0.10 16 6 C -0.10 0.18 3.15 -89.81 -0.28 -0.10 16 7 H 0.11 -0.02 7.68 -51.93 -0.40 -0.42 16 8 C -0.15 0.13 7.43 -25.92 -0.19 -0.06 16 9 C 0.12 -0.13 4.24 -67.12 -0.28 -0.42 16 10 H 0.12 0.14 7.46 -51.93 -0.39 -0.25 16 11 N -0.72 1.50 5.35 -53.02 -0.28 1.22 16 12 C 0.51 0.23 7.83 -10.99 -0.09 0.15 16 13 O -0.53 -2.84 15.58 5.55 0.09 -2.75 16 14 C -0.14 0.39 5.70 -27.88 -0.16 0.23 16 15 C -0.11 0.03 4.87 -26.73 -0.13 -0.10 16 16 C 0.06 -0.05 4.74 37.16 0.18 0.12 16 17 O -0.31 -0.80 10.14 -19.44 -0.20 -1.00 16 18 C 0.13 0.29 6.69 -39.22 -0.26 0.03 16 19 C -0.13 -0.31 9.55 -39.43 -0.38 -0.69 16 20 C -0.08 -0.09 5.39 -104.64 -0.56 -0.65 16 21 C -0.07 -0.04 2.82 36.01 0.10 0.07 16 22 O -0.54 -0.54 12.76 -35.23 -0.45 -0.99 16 23 Si 0.69 -0.52 29.79 -169.99 -5.06 -5.59 16 24 C -0.16 0.00 8.67 -39.56 -0.34 -0.34 16 25 C -0.07 0.02 10.04 -39.61 -0.40 -0.37 16 26 C -0.21 -0.07 9.04 -39.43 -0.36 -0.43 16 27 C -0.14 0.47 7.39 -25.91 -0.19 0.28 16 28 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 29 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 30 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 31 H 0.11 -0.46 8.14 -51.93 -0.42 -0.89 16 32 H 0.11 -0.45 7.84 -51.93 -0.41 -0.86 16 33 H 0.08 -0.17 7.89 -51.93 -0.41 -0.58 16 34 H 0.08 0.11 8.14 -51.92 -0.42 -0.31 16 35 H 0.40 -2.08 8.73 -40.82 -0.36 -2.44 16 36 H 0.10 -0.48 8.14 -51.93 -0.42 -0.91 16 37 H 0.10 -0.47 8.14 -51.93 -0.42 -0.89 16 38 H 0.08 0.12 8.10 -51.93 -0.42 -0.30 16 39 H 0.08 0.11 8.10 -51.92 -0.42 -0.31 16 40 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 41 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 42 H 0.13 0.39 8.06 -52.49 -0.42 -0.04 16 43 H 0.12 0.11 7.96 -51.93 -0.41 -0.30 16 44 H 0.38 -1.12 8.70 45.56 0.40 -0.72 16 45 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 46 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 47 H 0.13 -0.24 4.87 -52.49 -0.26 -0.50 16 48 H 0.13 -0.34 8.06 -52.48 -0.42 -0.77 16 49 H 0.13 -0.23 6.30 -52.49 -0.33 -0.56 16 50 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 51 H 0.09 -0.47 8.08 -51.93 -0.42 -0.88 16 LS Contribution 423.89 15.07 6.39 6.39 Total: 0.00 -11.41 423.89 -10.42 -21.83 By element: Atomic # 1 Polarization: -7.51 SS G_CDS: -8.04 Total: -15.55 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: -2.15 Total: -0.33 kcal Atomic # 7 Polarization: 1.50 SS G_CDS: -0.28 Total: 1.22 kcal Atomic # 8 Polarization: -6.71 SS G_CDS: -1.27 Total: -7.98 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: -5.06 Total: -5.59 kcal Total LS contribution 6.39 Total: 6.39 kcal Total: -11.41 -10.42 -21.83 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_4549616.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.673 kcal (2) G-P(sol) polarization free energy of solvation -11.413 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.085 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.422 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.835 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.508 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds