Wall clock time and date at job start Sun Mar 7 2021 14:27:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34225 * 117.00123 * 2 1 4 4 O 1.20823 * 120.00232 * 0.02562 * 3 2 1 5 5 C 1.50707 * 120.00096 * 180.02562 * 3 2 1 6 6 C 1.52994 * 109.47198 * 180.02562 * 5 3 2 7 7 H 1.08999 * 112.84915 * 316.19271 * 6 5 3 8 8 C 1.53780 * 113.69334 * 87.46463 * 6 5 3 9 9 C 1.53777 * 87.08498 * 139.98913 * 8 6 5 10 10 H 1.09007 * 113.69009 * 89.12362 * 9 8 6 11 11 N 1.46497 * 113.61648 * 220.02218 * 9 8 6 12 12 C 1.34777 * 119.99525 * 252.49385 * 11 9 8 13 13 O 1.21283 * 120.00463 * 0.02562 * 12 11 9 14 14 C 1.50700 * 119.99675 * 179.72583 * 12 11 9 15 15 O 1.42899 * 109.47143 * 180.27800 * 14 12 11 16 16 C 1.35901 * 116.99988 * 179.97438 * 15 14 12 17 17 C 1.38719 * 120.05341 * 179.97438 * 16 15 14 18 18 N 1.48003 * 120.02702 * 359.96367 * 17 16 15 19 19 O 1.21806 * 119.99540 * 179.97438 * 18 17 16 20 20 O 1.21794 * 120.00085 * 359.97438 * 18 17 16 21 21 C 1.38162 * 119.94173 * 179.97438 * 17 16 15 22 22 C 1.38244 * 120.05774 * 359.97438 * 21 17 16 23 23 C 1.50703 * 119.94464 * 179.97438 * 22 21 17 24 24 O 1.42895 * 109.47236 * 299.99805 * 23 22 21 25 25 Si 1.86308 * 109.46868 * 179.97438 * 23 22 21 26 26 C 1.38294 * 120.11102 * 0.02562 * 22 21 17 27 27 C 1.38123 * 120.05316 * 359.74961 * 26 22 21 28 28 C 1.53787 * 87.08211 * 334.56860 * 9 8 6 29 29 H 1.09000 * 109.46775 * 299.99528 * 1 2 3 30 30 H 1.08998 * 109.47276 * 59.99454 * 1 2 3 31 31 H 1.08996 * 109.47391 * 179.97438 * 1 2 3 32 32 H 1.09002 * 109.46961 * 59.99708 * 5 3 2 33 33 H 1.09004 * 109.46770 * 300.00687 * 5 3 2 34 34 H 1.09004 * 113.61194 * 25.43805 * 8 6 5 35 35 H 1.08994 * 113.61618 * 254.54331 * 8 6 5 36 36 H 0.97000 * 120.00580 * 72.50131 * 11 9 8 37 37 H 1.09009 * 109.47352 * 300.27556 * 14 12 11 38 38 H 1.08998 * 109.47585 * 60.27844 * 14 12 11 39 39 H 1.08005 * 119.97303 * 180.02562 * 21 17 16 40 40 H 1.09003 * 109.46652 * 60.00314 * 23 22 21 41 41 H 0.96700 * 114.00364 * 300.00053 * 24 23 22 42 42 H 1.48497 * 109.99802 * 58.68444 * 25 23 22 43 43 H 1.48498 * 109.99484 * 180.02562 * 25 23 22 44 44 H 1.07999 * 119.96853 * 179.97438 * 26 22 21 45 45 H 1.08004 * 120.02437 * 180.27670 * 27 26 22 46 46 H 1.08997 * 113.61747 * 139.97438 * 28 9 8 47 47 H 1.08999 * 113.61375 * 270.88134 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 -0.0006 6 6 4.0002 2.7420 0.0002 7 1 3.4248 3.3538 -0.6945 8 6 4.1163 3.3513 1.4073 9 6 5.3816 4.0679 0.9072 10 1 5.1853 5.0426 0.4603 11 7 6.4652 4.1016 1.8925 12 6 6.7755 5.2568 2.5135 13 8 6.1574 6.2683 2.2571 14 6 7.8861 5.2902 3.5316 15 8 8.0178 6.6155 4.0495 16 6 8.9814 6.8190 4.9861 17 6 9.1647 8.0813 5.5312 18 7 8.3115 9.2084 5.0929 19 8 8.4728 10.3165 5.5724 20 8 7.4483 9.0280 4.2529 21 6 10.1447 8.2854 6.4836 22 6 10.9417 7.2330 6.8936 23 6 12.0102 7.4586 7.9321 24 8 12.9411 8.4317 7.4541 25 14 12.9013 5.8566 8.2645 26 6 10.7609 5.9736 6.3516 27 6 9.7795 5.7633 5.4026 28 6 5.5209 2.9347 -0.1231 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3634 -1.0276 -0.0005 32 1 3.9557 0.7808 -0.8908 33 1 3.9564 0.7804 0.8891 34 1 4.3108 2.6150 2.1873 35 1 3.3007 4.0294 1.6581 36 1 6.9594 3.2926 2.0978 37 1 7.6536 4.6034 4.3456 38 1 8.8214 4.9902 3.0591 39 1 10.2876 9.2680 6.9087 40 1 11.5512 7.8167 8.8537 41 1 13.3884 8.1790 6.6349 42 1 13.5044 5.3410 7.0093 43 1 13.9572 6.0657 9.2875 44 1 11.3851 5.1531 6.6733 45 1 9.6358 4.7786 4.9829 46 1 5.8392 3.2766 -1.1079 47 1 6.0996 2.0847 0.2383 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:27:12 Heat of formation + Delta-G solvation = -130.064981 kcal Electronic energy + Delta-G solvation = -34071.336341 eV Core-core repulsion = 28998.214718 eV Total energy + Delta-G solvation = -5073.121624 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.144 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -43.29384 -41.84620 -41.61689 -40.93351 -39.83502 -39.05866 -37.62435 -37.51583 -37.43802 -34.91973 -33.47805 -32.27904 -31.72217 -29.79416 -28.31900 -27.82327 -26.67277 -26.59438 -24.78333 -23.83276 -22.82667 -22.00919 -21.62156 -20.60596 -20.44800 -19.77677 -19.18432 -18.64350 -18.63840 -18.39578 -18.17071 -17.83125 -17.59302 -17.51818 -17.22228 -16.79192 -16.35778 -16.22166 -16.07162 -15.71693 -15.63420 -15.20057 -14.84661 -14.76424 -14.48404 -14.04203 -14.03005 -13.77080 -13.66754 -13.45069 -13.33738 -13.21766 -12.91761 -12.80068 -12.71331 -12.38406 -12.35631 -12.27989 -12.22752 -12.12797 -11.85863 -11.81214 -11.79568 -11.46846 -11.31708 -10.95682 -10.83167 -10.74812 -10.09477 -9.79083 -4.90907 -1.31615 -0.23502 0.15706 0.35767 1.19612 1.23232 1.27945 1.46458 1.61593 1.79773 2.03037 2.05839 2.37309 3.11953 3.25837 3.35766 3.44892 3.45684 3.50391 3.63654 3.72278 3.76990 3.79379 3.83061 3.92136 3.94651 4.05447 4.26331 4.27939 4.29460 4.33124 4.40317 4.49922 4.56597 4.64722 4.65464 4.69887 4.76984 4.81627 4.84850 4.89258 5.03600 5.08143 5.12400 5.19699 5.25841 5.42741 5.59201 5.77928 6.40804 6.45451 6.50196 6.73140 7.20582 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.366 6.366 3 C 0.452 3.548 4 O -0.547 6.547 5 C -0.094 4.094 6 C -0.101 4.101 7 H 0.080 0.920 8 C -0.147 4.147 9 C 0.116 3.884 10 H 0.082 0.918 11 N -0.694 5.694 12 C 0.505 3.495 13 O -0.571 6.571 14 C 0.025 3.975 15 O -0.294 6.294 16 C 0.194 3.806 17 C -0.106 4.106 18 N 0.035 4.965 19 O -0.204 6.204 20 O -0.176 6.176 21 C -0.004 4.004 22 C -0.148 4.148 23 C -0.092 4.092 24 O -0.551 6.551 25 Si 0.791 3.209 26 C -0.004 4.004 27 C -0.187 4.187 28 C -0.113 4.113 29 H 0.057 0.943 30 H 0.057 0.943 31 H 0.128 0.872 32 H 0.136 0.864 33 H 0.138 0.862 34 H 0.110 0.890 35 H 0.040 0.960 36 H 0.426 0.574 37 H 0.148 0.852 38 H 0.146 0.854 39 H 0.149 0.851 40 H 0.126 0.874 41 H 0.389 0.611 42 H -0.260 1.260 43 H -0.310 1.310 44 H 0.190 0.810 45 H 0.209 0.791 46 H 0.083 0.917 47 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.229 -18.886 1.523 20.280 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C 0.297 3.703 4 O -0.437 6.437 5 C -0.131 4.131 6 C -0.121 4.121 7 H 0.098 0.902 8 C -0.186 4.186 9 C 0.011 3.989 10 H 0.100 0.900 11 N -0.348 5.348 12 C 0.291 3.709 13 O -0.449 6.449 14 C -0.052 4.052 15 O -0.204 6.204 16 C 0.144 3.856 17 C -0.191 4.191 18 N 0.544 4.456 19 O -0.411 6.411 20 O -0.389 6.389 21 C -0.023 4.023 22 C -0.149 4.149 23 C -0.199 4.199 24 O -0.360 6.360 25 Si 0.694 3.306 26 C -0.021 4.021 27 C -0.206 4.206 28 C -0.150 4.150 29 H 0.076 0.924 30 H 0.076 0.924 31 H 0.147 0.853 32 H 0.154 0.846 33 H 0.156 0.844 34 H 0.128 0.872 35 H 0.059 0.941 36 H 0.265 0.735 37 H 0.165 0.835 38 H 0.164 0.836 39 H 0.167 0.833 40 H 0.144 0.856 41 H 0.239 0.761 42 H -0.185 1.185 43 H -0.238 1.238 44 H 0.207 0.793 45 H 0.226 0.774 46 H 0.102 0.898 47 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 7.342 -18.328 1.939 19.839 hybrid contribution -0.533 1.944 -0.923 2.217 sum 6.810 -16.383 1.016 17.771 Atomic orbital electron populations 1.23462 0.75471 1.05446 1.02134 1.86506 1.24450 1.33507 1.83822 1.24704 0.93864 0.80747 0.70979 1.90696 1.68474 1.37648 1.46878 1.21545 0.84633 0.98267 1.08609 1.22152 0.97453 0.94589 0.97856 0.90194 1.23601 0.97163 1.00077 0.97776 1.22418 0.86848 0.99439 0.90233 0.89972 1.45581 1.36552 1.11011 1.41658 1.20647 0.84377 0.83759 0.82140 1.90857 1.53628 1.35680 1.64723 1.23164 1.00532 0.82842 0.98675 1.86479 1.49762 1.32671 1.51473 1.18994 0.87982 0.91549 0.87077 1.20885 1.03152 0.85145 1.09941 1.43928 1.00378 1.02383 0.98913 1.94501 1.75920 1.11764 1.58933 1.94683 1.27499 1.90421 1.26337 1.20838 0.88889 1.02132 0.90467 1.20388 0.99686 0.93090 1.01749 1.25543 0.91331 1.05632 0.97381 1.86632 1.57724 1.45102 1.46518 0.94170 0.81614 0.76165 0.78699 1.21737 0.93910 0.96357 0.90100 1.21828 0.97278 0.99401 1.02058 1.23360 0.94377 0.98006 0.99299 0.92416 0.92418 0.85335 0.84594 0.84445 0.87218 0.94079 0.73473 0.83492 0.83650 0.83325 0.85594 0.76150 1.18527 1.23831 0.79301 0.77444 0.89788 0.85247 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.15 16 2 O -0.37 -0.31 10.56 -51.37 -0.54 -0.85 16 3 C 0.45 0.75 7.96 71.24 0.57 1.31 16 4 O -0.55 -5.52 15.51 21.97 0.34 -5.18 16 5 C -0.09 0.76 5.65 29.85 0.17 0.93 16 6 C -0.10 0.50 3.15 -10.27 -0.03 0.46 16 7 H 0.08 0.08 7.68 -2.39 -0.02 0.06 16 8 C -0.15 0.37 7.43 31.12 0.23 0.60 16 9 C 0.12 -0.37 4.24 45.52 0.19 -0.17 16 10 H 0.08 0.41 7.47 -2.38 -0.02 0.39 16 11 N -0.69 5.33 5.35 -440.03 -2.36 2.98 16 12 C 0.50 0.34 7.91 87.66 0.69 1.04 16 13 O -0.57 -9.03 16.10 16.00 0.26 -8.77 16 14 C 0.02 -0.20 5.22 71.24 0.37 0.17 16 15 O -0.29 -1.25 7.68 -63.42 -0.49 -1.73 16 16 C 0.19 0.02 6.67 22.51 0.15 0.17 16 17 C -0.11 -0.74 6.87 36.48 0.25 -0.49 16 18 N 0.03 0.60 4.45 -46.24 -0.21 0.39 16 19 O -0.20 -3.93 18.45 18.88 0.35 -3.59 16 20 O -0.18 -3.96 17.24 25.62 0.44 -3.51 16 21 C 0.00 -0.01 9.11 22.25 0.20 0.20 16 22 C -0.15 0.92 5.39 -19.85 -0.11 0.81 16 23 C -0.09 0.61 2.82 71.24 0.20 0.81 16 24 O -0.55 0.87 12.77 -148.98 -1.90 -1.03 16 25 Si 0.79 -8.42 29.79 68.60 2.04 -6.38 16 26 C 0.00 0.05 8.66 22.26 0.19 0.24 16 27 C -0.19 2.21 9.04 22.36 0.20 2.42 16 28 C -0.11 1.16 7.39 31.12 0.23 1.39 16 29 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 30 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 31 H 0.13 -0.94 8.14 -2.39 -0.02 -0.96 16 32 H 0.14 -1.73 8.14 -2.39 -0.02 -1.75 16 33 H 0.14 -1.89 7.85 -2.39 -0.02 -1.90 16 34 H 0.11 -0.83 7.90 -2.38 -0.02 -0.85 16 35 H 0.04 0.22 8.14 -2.39 -0.02 0.20 16 36 H 0.43 -7.60 8.73 -92.71 -0.81 -8.41 16 37 H 0.15 -2.59 7.65 -2.38 -0.02 -2.61 16 38 H 0.15 -2.54 7.68 -2.39 -0.02 -2.56 16 39 H 0.15 0.59 7.61 -2.91 -0.02 0.57 16 40 H 0.13 -0.89 7.96 -2.39 -0.02 -0.91 16 41 H 0.39 -3.10 8.70 -74.06 -0.64 -3.75 16 42 H -0.26 2.51 7.11 99.48 0.71 3.22 16 43 H -0.31 0.13 7.11 99.48 0.71 0.84 16 44 H 0.19 -3.86 4.87 -2.91 -0.01 -3.87 16 45 H 0.21 -4.65 6.30 -2.91 -0.02 -4.67 16 46 H 0.08 -0.81 8.14 -2.39 -0.02 -0.82 16 47 H 0.13 -2.26 8.08 -2.39 -0.02 -2.28 16 Total: 0.00 -49.06 407.48 2.29 -46.77 By element: Atomic # 1 Polarization: -29.76 SS G_CDS: -0.36 Total: -30.12 kcal Atomic # 6 Polarization: 6.33 SS G_CDS: 4.71 Total: 11.04 kcal Atomic # 7 Polarization: 5.93 SS G_CDS: -2.56 Total: 3.37 kcal Atomic # 8 Polarization: -23.13 SS G_CDS: -1.54 Total: -24.67 kcal Atomic # 14 Polarization: -8.42 SS G_CDS: 2.04 Total: -6.38 kcal Total: -49.06 2.29 -46.77 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.296 kcal (2) G-P(sol) polarization free energy of solvation -49.058 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.354 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.289 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -46.769 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.065 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds