Wall clock time and date at job start Sun Mar 7 2021 14:27:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34224 * 117.00077 * 2 1 4 4 O 1.20833 * 120.00103 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00302 * 180.02562 * 3 2 1 6 6 C 1.52999 * 109.47581 * 180.02562 * 5 3 2 7 7 H 1.09002 * 112.84811 * 43.79680 * 6 5 3 8 8 C 1.53776 * 113.62044 * 174.99953 * 6 5 3 9 9 C 1.53781 * 87.08638 * 139.97658 * 8 6 5 10 10 H 1.08995 * 113.60861 * 89.19777 * 9 8 6 11 11 N 1.46498 * 113.61382 * 220.02313 * 9 8 6 12 12 C 1.34774 * 119.99625 * 205.00117 * 11 9 8 13 13 O 1.21282 * 119.99991 * 359.97438 * 12 11 9 14 14 C 1.50696 * 120.00042 * 179.97438 * 12 11 9 15 15 O 1.42899 * 109.47222 * 179.97438 * 14 12 11 16 16 C 1.35909 * 117.00233 * 179.97438 * 15 14 12 17 17 C 1.38702 * 120.05716 * 179.97438 * 16 15 14 18 18 C 1.38172 * 119.94510 * 180.02562 * 17 16 15 19 19 C 1.50699 * 119.97168 * 179.97438 * 18 17 16 20 20 O 1.42896 * 109.47451 * 65.00248 * 19 18 17 21 21 Si 1.86302 * 109.46698 * 185.00123 * 19 18 17 22 22 C 1.38240 * 120.04997 * 0.02562 * 18 17 16 23 23 C 1.38285 * 120.11937 * 359.97438 * 22 18 17 24 24 C 1.38125 * 120.05082 * 359.76583 * 23 22 18 25 25 C 1.53778 * 87.07826 * 334.56876 * 9 8 6 26 26 H 1.09001 * 109.46626 * 60.00180 * 1 2 3 27 27 H 1.09001 * 109.47153 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.47070 * 300.00162 * 1 2 3 29 29 H 1.09009 * 109.46972 * 299.99362 * 5 3 2 30 30 H 1.08995 * 109.47473 * 59.99636 * 5 3 2 31 31 H 1.08999 * 113.61219 * 254.53069 * 8 6 5 32 32 H 1.09010 * 113.61212 * 25.34120 * 8 6 5 33 33 H 0.96995 * 120.00579 * 24.99464 * 11 9 8 34 34 H 1.09000 * 109.46966 * 299.99782 * 14 12 11 35 35 H 1.08998 * 109.47427 * 59.99760 * 14 12 11 36 36 H 1.08005 * 120.03066 * 359.97438 * 17 16 15 37 37 H 1.09004 * 109.47055 * 305.00065 * 19 18 17 38 38 H 0.96693 * 114.00028 * 179.97438 * 20 19 18 39 39 H 1.48494 * 110.00251 * 300.00110 * 21 19 18 40 40 H 1.48504 * 110.00128 * 61.32215 * 21 19 18 41 41 H 1.08002 * 119.93954 * 179.97438 * 22 18 17 42 42 H 1.07995 * 119.97861 * 180.02562 * 23 22 18 43 43 H 1.08001 * 120.02978 * 180.27652 * 24 23 22 44 44 H 1.09007 * 113.61587 * 270.88136 * 25 9 8 45 45 H 1.09000 * 113.61680 * 139.97923 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0002 2.7420 0.0002 7 1 3.4252 3.3531 0.6960 8 6 5.5209 2.9348 0.1225 9 6 5.3811 4.0677 -0.9080 10 1 5.1851 5.0424 -0.4612 11 7 6.4641 4.1011 -1.8940 12 6 6.7741 5.2561 -2.5155 13 8 6.1563 6.2676 -2.2588 14 6 7.8885 5.2906 -3.5293 15 8 8.0230 6.6168 -4.0443 16 6 8.9910 6.8216 -4.9761 17 6 9.1765 8.0844 -5.5190 18 6 10.1609 8.2900 -6.4666 19 6 10.3627 9.6617 -7.0572 20 8 10.7998 10.5605 -6.0360 21 14 11.6498 9.5757 -8.4014 22 6 10.9601 7.2382 -6.8739 23 6 10.7772 5.9782 -6.3342 24 6 9.7981 5.7687 -5.3828 25 6 4.1155 3.3511 -1.4072 26 1 -0.3632 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3633 0.5139 0.8900 29 1 3.9564 0.7806 0.8893 30 1 3.9558 0.7809 -0.8907 31 1 5.8399 3.2769 1.1070 32 1 6.0993 2.0839 -0.2378 33 1 6.9581 3.2920 -2.0994 34 1 8.8218 4.9887 -3.0539 35 1 7.6586 4.6059 -4.3456 36 1 8.5515 8.9063 -5.2020 37 1 9.4221 10.0184 -7.4770 38 1 10.9504 11.4641 -6.3454 39 1 12.9369 9.0906 -7.8419 40 1 11.1929 8.6686 -9.4848 41 1 11.7288 7.4008 -7.6150 42 1 11.4031 5.1582 -6.6538 43 1 9.6584 4.7855 -4.9583 44 1 4.3095 2.6146 -2.1871 45 1 3.2997 4.0292 -1.6576 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_4860298.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:27:26 Heat of formation + Delta-G solvation = -129.552765 kcal Electronic energy + Delta-G solvation = -27503.719153 eV Core-core repulsion = 23261.636177 eV Total energy + Delta-G solvation = -4242.082977 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -41.78322 -41.46084 -40.82955 -39.61150 -38.68302 -37.41751 -37.24767 -34.91361 -32.62114 -32.05945 -31.45565 -29.38626 -28.35639 -26.86615 -26.78466 -24.63411 -23.70384 -22.58021 -21.76475 -21.60797 -20.63518 -19.16595 -18.60282 -18.41008 -18.23367 -17.86245 -17.56767 -17.49461 -17.43234 -17.06300 -16.65068 -16.24040 -15.83758 -15.60836 -15.38423 -14.91217 -14.80022 -14.56275 -14.51217 -14.23599 -13.96186 -13.75959 -13.70914 -13.61170 -13.47621 -13.22323 -13.01880 -12.90326 -12.35967 -12.25790 -12.19769 -12.08318 -11.97283 -11.79226 -11.78150 -11.51232 -11.38891 -10.87018 -10.37168 -10.16024 -9.91796 -9.28837 -4.96930 0.17460 0.37326 1.21313 1.24239 1.44302 1.46264 1.64341 1.71465 1.96897 2.53407 2.61587 3.27595 3.30872 3.37866 3.44763 3.60688 3.65986 3.72693 3.78500 3.81105 3.86886 3.89207 3.96206 4.14530 4.15178 4.17849 4.21265 4.22475 4.25849 4.37316 4.48680 4.50250 4.57769 4.59016 4.64447 4.70241 4.86953 4.94435 4.98677 5.13997 5.19152 5.30532 5.38554 5.41604 5.44695 5.61162 6.22153 6.36567 6.63000 6.74507 7.07811 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.139 4.139 9 C 0.125 3.875 10 H 0.120 0.880 11 N -0.718 5.718 12 C 0.516 3.484 13 O -0.510 6.510 14 C 0.040 3.960 15 O -0.287 6.287 16 C 0.131 3.869 17 C -0.117 4.117 18 C -0.035 4.035 19 C -0.075 4.075 20 O -0.544 6.544 21 Si 0.689 3.311 22 C -0.160 4.160 23 C -0.071 4.071 24 C -0.206 4.206 25 C -0.147 4.147 26 H 0.063 0.937 27 H 0.103 0.897 28 H 0.064 0.936 29 H 0.110 0.890 30 H 0.108 0.892 31 H 0.082 0.918 32 H 0.091 0.909 33 H 0.402 0.598 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.138 0.862 37 H 0.077 0.923 38 H 0.383 0.617 39 H -0.250 1.250 40 H -0.255 1.255 41 H 0.121 0.879 42 H 0.131 0.869 43 H 0.132 0.868 44 H 0.086 0.914 45 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.668 -4.884 -1.673 5.811 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.127 0.873 8 C -0.177 4.177 9 C 0.021 3.979 10 H 0.138 0.862 11 N -0.371 5.371 12 C 0.301 3.699 13 O -0.383 6.383 14 C -0.039 4.039 15 O -0.199 6.199 16 C 0.086 3.914 17 C -0.136 4.136 18 C -0.035 4.035 19 C -0.185 4.185 20 O -0.350 6.350 21 Si 0.590 3.410 22 C -0.178 4.178 23 C -0.089 4.089 24 C -0.225 4.225 25 C -0.186 4.186 26 H 0.082 0.918 27 H 0.121 0.879 28 H 0.083 0.917 29 H 0.128 0.872 30 H 0.126 0.874 31 H 0.101 0.899 32 H 0.110 0.890 33 H 0.237 0.763 34 H 0.113 0.887 35 H 0.112 0.888 36 H 0.156 0.844 37 H 0.095 0.905 38 H 0.231 0.769 39 H -0.175 1.175 40 H -0.179 1.179 41 H 0.138 0.862 42 H 0.149 0.851 43 H 0.149 0.851 44 H 0.105 0.895 45 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 2.340 -4.735 -1.494 5.489 hybrid contribution -0.334 -1.027 0.196 1.097 sum 2.006 -5.762 -1.298 6.238 Atomic orbital electron populations 1.23305 0.75908 1.03941 1.02730 1.86502 1.23818 1.33534 1.84087 1.23812 0.92299 0.81405 0.72433 1.90703 1.67231 1.36300 1.44752 1.21401 0.87648 0.98822 1.06094 1.22252 0.96143 0.94224 0.99209 0.87336 1.23435 0.95776 0.98410 1.00100 1.22530 0.86249 1.00106 0.89064 0.86240 1.45799 1.37349 1.11051 1.42899 1.20066 0.84180 0.83883 0.81772 1.90793 1.51525 1.33233 1.62783 1.22487 0.98993 0.85091 0.97356 1.86177 1.51374 1.28695 1.53682 1.19012 0.88569 0.94274 0.89577 1.20257 1.00231 0.95060 0.98016 1.19133 0.94809 0.93501 0.96047 1.24745 1.06574 0.89042 0.98163 1.86504 1.89680 1.23094 1.35740 0.95289 0.78617 0.89270 0.77860 1.20823 1.00690 0.93656 1.02649 1.20850 0.96541 0.96672 0.94881 1.21276 0.99665 0.98769 1.02765 1.23577 0.98352 1.00188 0.96475 0.91776 0.87906 0.91737 0.87150 0.87433 0.89918 0.89015 0.76290 0.88712 0.88755 0.84421 0.90497 0.76904 1.17503 1.17939 0.86187 0.85101 0.85056 0.89546 0.90271 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.35 10.57 -39.24 -0.41 -0.76 16 3 C 0.46 0.51 7.96 36.00 0.29 0.80 16 4 O -0.50 -2.17 15.51 -18.76 -0.29 -2.46 16 5 C -0.10 0.27 5.65 -27.89 -0.16 0.11 16 6 C -0.10 0.19 3.15 -89.81 -0.28 -0.10 16 7 H 0.11 -0.03 7.68 -51.93 -0.40 -0.43 16 8 C -0.14 0.48 7.39 -25.92 -0.19 0.29 16 9 C 0.12 -0.12 4.24 -67.12 -0.28 -0.41 16 10 H 0.12 0.15 7.46 -51.93 -0.39 -0.23 16 11 N -0.72 1.25 5.35 -53.02 -0.28 0.97 16 12 C 0.52 0.92 7.91 -10.99 -0.09 0.84 16 13 O -0.51 -3.59 16.10 -14.35 -0.23 -3.82 16 14 C 0.04 -0.01 5.22 36.00 0.19 0.18 16 15 O -0.29 -1.13 9.67 -39.36 -0.38 -1.52 16 16 C 0.13 0.44 6.69 -39.22 -0.26 0.18 16 17 C -0.12 -0.47 9.62 -39.43 -0.38 -0.84 16 18 C -0.03 -0.11 5.38 -104.65 -0.56 -0.67 16 19 C -0.07 -0.06 2.79 36.01 0.10 0.05 16 20 O -0.54 -0.60 12.81 -35.23 -0.45 -1.05 16 21 Si 0.69 -0.51 29.85 -169.99 -5.07 -5.58 16 22 C -0.16 -0.43 8.67 -39.56 -0.34 -0.77 16 23 C -0.07 -0.09 10.04 -39.61 -0.40 -0.49 16 24 C -0.21 -0.23 9.04 -39.43 -0.36 -0.59 16 25 C -0.15 0.13 7.43 -25.92 -0.19 -0.06 16 26 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 27 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 28 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 29 H 0.11 -0.47 8.14 -51.92 -0.42 -0.89 16 30 H 0.11 -0.46 7.84 -51.93 -0.41 -0.87 16 31 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 32 H 0.09 -0.48 8.08 -51.92 -0.42 -0.90 16 33 H 0.40 -2.11 8.73 -40.82 -0.36 -2.46 16 34 H 0.10 -0.27 7.65 -51.93 -0.40 -0.67 16 35 H 0.09 -0.28 7.67 -51.93 -0.40 -0.68 16 36 H 0.14 0.54 8.06 -52.48 -0.42 0.12 16 37 H 0.08 -0.06 7.96 -51.93 -0.41 -0.48 16 38 H 0.38 -1.59 8.74 45.56 0.40 -1.19 16 39 H -0.25 -0.57 7.05 56.52 0.40 -0.17 16 40 H -0.25 -0.41 7.11 56.52 0.40 0.00 16 41 H 0.12 0.23 4.86 -52.49 -0.26 -0.02 16 42 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 43 H 0.13 -0.26 6.30 -52.49 -0.33 -0.59 16 44 H 0.09 -0.18 7.90 -51.92 -0.41 -0.59 16 45 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 LS Contribution 381.57 15.07 5.75 5.75 Total: 0.00 -12.66 381.57 -9.59 -22.25 By element: Atomic # 1 Polarization: -6.95 SS G_CDS: -6.36 Total: -13.31 kcal Atomic # 6 Polarization: 1.39 SS G_CDS: -1.86 Total: -0.47 kcal Atomic # 7 Polarization: 1.25 SS G_CDS: -0.28 Total: 0.97 kcal Atomic # 8 Polarization: -7.84 SS G_CDS: -1.77 Total: -9.61 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.07 Total: -5.58 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -12.66 -9.59 -22.25 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_4860298.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.304 kcal (2) G-P(sol) polarization free energy of solvation -12.659 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.962 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.591 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.249 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds