Wall clock time and date at job start Sun Mar 7 2021 14:27:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45193 * 1 3 3 C 1.34231 * 116.99856 * 2 1 4 4 O 1.20821 * 119.99857 * 0.02562 * 3 2 1 5 5 C 1.50700 * 119.99740 * 179.97438 * 3 2 1 6 6 C 1.53004 * 109.47018 * 180.02562 * 5 3 2 7 7 H 1.09003 * 112.84878 * 43.80429 * 6 5 3 8 8 C 1.53782 * 113.61716 * 175.00073 * 6 5 3 9 9 C 1.53783 * 87.08357 * 140.06334 * 8 6 5 10 10 H 1.08993 * 113.61242 * 89.19573 * 9 8 6 11 11 N 1.46497 * 113.61381 * 220.02048 * 9 8 6 12 12 C 1.34777 * 119.99525 * 203.46726 * 11 9 8 13 13 O 1.21283 * 120.00463 * 0.02562 * 12 11 9 14 14 C 1.50700 * 119.99675 * 179.72583 * 12 11 9 15 15 O 1.42899 * 109.47143 * 180.27800 * 14 12 11 16 16 C 1.35987 * 117.00157 * 179.97438 * 15 14 12 17 17 C 1.38678 * 120.00144 * 179.97438 * 16 15 14 18 18 C 1.50707 * 119.99821 * 359.97438 * 17 16 15 19 19 O 1.42904 * 109.47050 * 74.99571 * 18 17 16 20 20 Si 1.86298 * 109.46768 * 194.99682 * 18 17 16 21 21 C 1.38155 * 119.99952 * 180.02562 * 17 16 15 22 22 C 1.38673 * 119.99998 * 0.02562 * 21 17 16 23 23 O 1.35978 * 119.99957 * 180.02562 * 22 21 17 24 24 C 1.42898 * 117.00070 * 180.02562 * 23 22 21 25 25 C 1.38715 * 119.99970 * 359.97438 * 22 21 17 26 26 C 1.38112 * 120.00440 * 359.71930 * 25 22 21 27 27 C 1.53788 * 87.16978 * 334.61167 * 9 8 6 28 28 H 1.09007 * 109.46741 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47361 * 299.99781 * 1 2 3 30 30 H 1.09001 * 109.47108 * 60.00276 * 1 2 3 31 31 H 1.08997 * 109.47190 * 60.00327 * 5 3 2 32 32 H 1.09000 * 109.47587 * 299.99929 * 5 3 2 33 33 H 1.09004 * 113.61315 * 25.51455 * 8 6 5 34 34 H 1.09001 * 113.61460 * 254.61757 * 8 6 5 35 35 H 0.97000 * 120.00580 * 23.47472 * 11 9 8 36 36 H 1.09009 * 109.47352 * 300.27556 * 14 12 11 37 37 H 1.08998 * 109.47585 * 60.27844 * 14 12 11 38 38 H 1.08993 * 109.47202 * 314.99876 * 18 17 16 39 39 H 0.96695 * 114.00284 * 300.00252 * 19 18 17 40 40 H 1.48498 * 110.00106 * 298.67661 * 20 18 17 41 41 H 1.48497 * 110.00221 * 60.00199 * 20 18 17 42 42 H 1.07995 * 119.99433 * 180.02562 * 21 17 16 43 43 H 1.08997 * 109.47399 * 59.99613 * 24 23 22 44 44 H 1.09003 * 109.47285 * 179.97438 * 24 23 22 45 45 H 1.08996 * 109.47048 * 299.99451 * 24 23 22 46 46 H 1.07999 * 120.00191 * 180.02562 * 25 22 21 47 47 H 1.07992 * 120.00639 * 180.29750 * 26 25 22 48 48 H 1.08996 * 113.61247 * 139.94201 * 27 9 8 49 49 H 1.09002 * 113.61228 * 270.83771 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5662 1.2749 0.0006 6 6 4.0001 2.7421 0.0011 7 1 3.4246 3.3534 0.6963 8 6 5.5207 2.9349 0.1245 9 6 5.3814 4.0689 -0.9048 10 1 5.1849 5.0431 -0.4572 11 7 6.4649 4.1036 -1.8901 12 6 6.7548 5.2522 -2.5328 13 8 6.1189 6.2573 -2.2951 14 6 7.8735 5.2894 -3.5419 15 8 7.9885 6.6093 -4.0771 16 6 8.9580 6.8158 -5.0080 17 6 9.1242 8.0730 -5.5691 18 6 8.2300 9.2105 -5.1475 19 8 8.6195 9.6672 -3.8506 20 14 8.3842 10.6076 -6.3702 21 6 10.1089 8.2826 -6.5152 22 6 10.9307 7.2355 -6.9043 23 8 11.9002 7.4419 -7.8351 24 6 12.7096 6.3186 -8.1889 25 6 10.7644 5.9779 -6.3431 26 6 9.7842 5.7699 -5.3926 27 6 4.1150 3.3550 -1.4065 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 3.9563 0.7806 -0.8891 32 1 3.9557 0.7810 0.8908 33 1 6.0994 2.0851 -0.2377 34 1 5.8391 3.2760 1.1096 35 1 6.9737 3.2998 -2.0800 36 1 8.8094 5.0110 -3.0572 37 1 7.6591 4.5878 -4.3481 38 1 7.1959 8.8674 -5.1164 39 1 8.5640 8.9904 -3.1622 40 1 9.7829 11.1056 -6.3986 41 1 7.9820 10.1455 -7.7229 42 1 10.2385 9.2618 -6.9518 43 1 12.0775 5.5287 -8.5945 44 1 13.4408 6.6196 -8.9391 45 1 13.2275 5.9507 -7.3033 46 1 11.4047 5.1626 -6.6457 47 1 9.6579 4.7920 -4.9522 48 1 3.3003 4.0348 -1.6557 49 1 4.3087 2.6203 -2.1881 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:27:29 Heat of formation + Delta-G solvation = -166.953772 kcal Electronic energy + Delta-G solvation = -32316.495370 eV Core-core repulsion = 27598.570753 eV Total energy + Delta-G solvation = -4717.924617 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -41.91570 -41.67303 -41.04105 -40.16831 -39.31155 -37.97768 -37.42081 -36.83815 -34.94862 -32.82979 -31.94130 -31.01929 -29.52930 -28.41686 -28.09848 -26.89519 -26.49199 -24.85478 -23.58959 -22.41494 -22.00869 -21.66493 -20.67556 -19.57262 -18.84960 -18.66513 -18.42950 -17.92241 -17.84877 -17.60413 -17.52083 -17.40869 -16.96607 -16.74157 -16.29437 -16.01847 -15.74488 -15.60169 -15.46285 -15.19475 -14.87831 -14.62836 -14.52108 -14.14743 -13.98681 -13.84387 -13.72511 -13.62140 -13.50336 -13.40837 -13.09495 -13.03481 -12.93710 -12.66955 -12.31576 -12.24525 -12.00543 -11.98176 -11.79439 -11.56188 -11.53489 -11.40602 -11.11104 -10.92044 -10.85133 -10.19748 -10.12767 -8.85883 -4.67713 0.02688 0.31069 1.20043 1.35538 1.41565 1.52600 1.69879 1.80481 2.10347 2.22218 2.48565 2.52257 3.24496 3.28174 3.37690 3.51100 3.57837 3.60459 3.63965 3.72580 3.78845 3.83390 3.92627 4.03687 4.08913 4.11547 4.13006 4.13590 4.14164 4.19853 4.24441 4.28654 4.35496 4.45240 4.47697 4.50656 4.56412 4.60443 4.62220 4.67695 4.84346 4.96648 5.00801 5.07424 5.11146 5.13882 5.34552 5.37746 5.42596 6.04401 6.26979 6.34921 6.73218 6.76625 7.03035 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.502 6.502 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.109 0.891 8 C -0.139 4.139 9 C 0.125 3.875 10 H 0.119 0.881 11 N -0.718 5.718 12 C 0.517 3.483 13 O -0.509 6.509 14 C 0.040 3.960 15 O -0.288 6.288 16 C 0.102 3.898 17 C -0.096 4.096 18 C -0.076 4.076 19 O -0.533 6.533 20 Si 0.747 3.253 21 C -0.115 4.115 22 C 0.104 3.896 23 O -0.316 6.316 24 C 0.026 3.974 25 C -0.164 4.164 26 C -0.164 4.164 27 C -0.147 4.147 28 H 0.103 0.897 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.107 0.893 32 H 0.110 0.890 33 H 0.091 0.909 34 H 0.083 0.917 35 H 0.402 0.598 36 H 0.094 0.906 37 H 0.093 0.907 38 H 0.080 0.920 39 H 0.368 0.632 40 H -0.251 1.251 41 H -0.249 1.249 42 H 0.139 0.861 43 H 0.056 0.944 44 H 0.103 0.897 45 H 0.056 0.944 46 H 0.136 0.864 47 H 0.135 0.865 48 H 0.079 0.921 49 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.027 -8.569 0.457 8.818 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.280 6.280 3 C 0.300 3.700 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.127 0.873 8 C -0.177 4.177 9 C 0.021 3.979 10 H 0.137 0.863 11 N -0.371 5.371 12 C 0.301 3.699 13 O -0.382 6.382 14 C -0.039 4.039 15 O -0.201 6.201 16 C 0.057 3.943 17 C -0.097 4.097 18 C -0.184 4.184 19 O -0.338 6.338 20 Si 0.646 3.354 21 C -0.133 4.133 22 C 0.058 3.942 23 O -0.230 6.230 24 C -0.069 4.069 25 C -0.183 4.183 26 C -0.183 4.183 27 C -0.186 4.186 28 H 0.121 0.879 29 H 0.083 0.917 30 H 0.082 0.918 31 H 0.125 0.875 32 H 0.129 0.871 33 H 0.110 0.890 34 H 0.101 0.899 35 H 0.237 0.763 36 H 0.112 0.888 37 H 0.111 0.889 38 H 0.098 0.902 39 H 0.216 0.784 40 H -0.176 1.176 41 H -0.173 1.173 42 H 0.156 0.844 43 H 0.075 0.925 44 H 0.122 0.878 45 H 0.075 0.925 46 H 0.154 0.846 47 H 0.153 0.847 48 H 0.098 0.902 49 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 1.722 -6.367 -0.448 6.611 hybrid contribution 0.597 -2.855 0.382 2.942 sum 2.319 -9.222 -0.065 9.510 Atomic orbital electron populations 1.23305 0.75899 1.03946 1.02737 1.86502 1.23827 1.33533 1.84089 1.23807 0.92293 0.81411 0.72448 1.90701 1.67218 1.36303 1.44731 1.21396 0.87670 0.98812 1.06082 1.22281 0.96109 0.94218 0.99218 0.87332 1.23427 0.95814 0.98359 1.00083 1.22530 0.86224 1.00088 0.89045 0.86271 1.45806 1.36995 1.11844 1.42451 1.20039 0.84329 0.83828 0.81701 1.90797 1.50693 1.33396 1.63325 1.22480 0.98989 0.85265 0.97160 1.86121 1.51140 1.29244 1.53563 1.18624 0.90158 0.93573 0.91939 1.19499 0.98515 0.93621 0.98090 1.25214 0.97947 1.02713 0.92556 1.86694 1.90215 1.40374 1.16564 0.93097 0.83883 0.84179 0.74285 1.20130 0.95464 0.98581 0.99159 1.18797 0.90585 0.93443 0.91329 1.86113 1.44192 1.37376 1.55282 1.23109 0.94216 0.88590 1.00962 1.21080 1.01059 0.96457 0.99726 1.21038 0.97686 0.98697 1.00845 1.23603 0.98358 1.00171 0.96457 0.87907 0.91737 0.91764 0.87458 0.87147 0.89036 0.89881 0.76323 0.88796 0.88896 0.90206 0.78397 1.17594 1.17339 0.84376 0.92523 0.87842 0.92491 0.84596 0.84736 0.90239 0.89593 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.55 101.05 1.07 1.04 16 2 O -0.36 -0.26 10.57 -39.26 -0.41 -0.68 16 3 C 0.46 0.38 7.96 36.01 0.29 0.66 16 4 O -0.50 -2.02 15.51 -18.75 -0.29 -2.31 16 5 C -0.10 0.30 5.65 -27.88 -0.16 0.14 16 6 C -0.10 0.23 3.15 -89.71 -0.28 -0.05 16 7 H 0.11 -0.08 7.68 -51.93 -0.40 -0.48 16 8 C -0.14 0.56 7.39 -25.92 -0.19 0.37 16 9 C 0.13 -0.21 4.21 -67.12 -0.28 -0.50 16 10 H 0.12 0.06 7.50 -51.93 -0.39 -0.33 16 11 N -0.72 1.87 5.36 -53.02 -0.28 1.59 16 12 C 0.52 0.29 7.91 -10.98 -0.09 0.20 16 13 O -0.51 -2.81 16.12 -14.36 -0.23 -3.04 16 14 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 15 O -0.29 -0.62 8.56 -39.61 -0.34 -0.96 16 16 C 0.10 0.24 6.62 -39.24 -0.26 -0.02 16 17 C -0.10 -0.35 5.28 -104.49 -0.55 -0.90 16 18 C -0.08 -0.24 2.33 36.01 0.08 -0.16 16 19 O -0.53 -2.17 12.65 -35.23 -0.45 -2.62 16 20 Si 0.75 1.40 30.40 -169.99 -5.17 -3.77 16 21 C -0.12 -0.46 8.59 -39.45 -0.34 -0.80 16 22 C 0.10 0.32 6.68 -39.24 -0.26 0.06 16 23 O -0.32 -0.91 10.50 -19.67 -0.21 -1.12 16 24 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 25 C -0.16 -0.14 9.03 -39.45 -0.36 -0.49 16 26 C -0.16 -0.05 9.03 -39.45 -0.36 -0.41 16 27 C -0.15 0.21 7.45 -25.82 -0.19 0.01 16 28 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 29 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 30 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 31 H 0.11 -0.49 7.86 -51.93 -0.41 -0.90 16 32 H 0.11 -0.51 8.14 -51.93 -0.42 -0.93 16 33 H 0.09 -0.53 8.07 -51.93 -0.42 -0.95 16 34 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 35 H 0.40 -2.40 8.71 -40.82 -0.36 -2.75 16 36 H 0.09 -0.39 7.65 -51.92 -0.40 -0.78 16 37 H 0.09 -0.36 7.67 -51.93 -0.40 -0.76 16 38 H 0.08 0.24 7.82 -51.93 -0.41 -0.16 16 39 H 0.37 0.99 8.60 45.56 0.39 1.38 16 40 H -0.25 -1.02 6.81 56.52 0.38 -0.64 16 41 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 42 H 0.14 0.56 4.93 -52.49 -0.26 0.31 16 43 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 44 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 45 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 46 H 0.14 -0.23 6.29 -52.49 -0.33 -0.56 16 47 H 0.13 -0.40 6.29 -52.49 -0.33 -0.73 16 48 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 49 H 0.09 -0.21 7.91 -51.93 -0.41 -0.62 16 LS Contribution 409.73 15.07 6.17 6.17 Total: 0.00 -11.36 409.73 -8.99 -20.34 By element: Atomic # 1 Polarization: -6.76 SS G_CDS: -7.08 Total: -13.84 kcal Atomic # 6 Polarization: 0.93 SS G_CDS: -0.70 Total: 0.23 kcal Atomic # 7 Polarization: 1.87 SS G_CDS: -0.28 Total: 1.59 kcal Atomic # 8 Polarization: -8.80 SS G_CDS: -1.93 Total: -10.72 kcal Atomic # 14 Polarization: 1.40 SS G_CDS: -5.17 Total: -3.77 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -11.36 -8.99 -20.34 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -146.609 kcal (2) G-P(sol) polarization free energy of solvation -11.357 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.966 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.987 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.345 kcal (6) G-S(sol) free energy of system = (1) + (5) -166.954 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds