Wall clock time and date at job start Sun Mar 7 2021 14:27:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 116.99985 * 2 1 4 4 O 1.20826 * 120.00319 * 359.97438 * 3 2 1 5 5 C 1.50706 * 120.00394 * 179.97438 * 3 2 1 6 6 C 1.52997 * 109.47226 * 179.97438 * 5 3 2 7 7 H 1.09002 * 112.85102 * 316.20065 * 6 5 3 8 8 C 1.53785 * 113.61259 * 87.50826 * 6 5 3 9 9 C 1.53780 * 87.07949 * 139.97751 * 8 6 5 10 10 H 1.09003 * 113.61582 * 89.11778 * 9 8 6 11 11 N 1.46503 * 113.61333 * 220.01563 * 9 8 6 12 12 C 1.34770 * 120.00115 * 252.50160 * 11 9 8 13 13 O 1.21285 * 120.00383 * 359.97438 * 12 11 9 14 14 C 1.50699 * 119.99909 * 180.02562 * 12 11 9 15 15 O 1.42904 * 109.47361 * 180.02562 * 14 12 11 16 16 C 1.35887 * 117.00302 * 180.02562 * 15 14 12 17 17 C 1.38755 * 120.03124 * 179.97438 * 16 15 14 18 18 C 1.50705 * 119.96736 * 359.95089 * 17 16 15 19 19 O 1.42895 * 109.46936 * 75.00367 * 18 17 16 20 20 Si 1.86304 * 109.46981 * 195.00007 * 18 17 16 21 21 C 1.38196 * 120.05698 * 179.97438 * 17 16 15 22 22 C 1.38148 * 120.11195 * 0.02562 * 21 17 16 23 23 C 1.38795 * 120.05240 * 359.97438 * 22 21 17 24 24 O 1.35896 * 120.02751 * 180.02562 * 23 22 21 25 25 C 1.42904 * 117.00108 * 0.02562 * 24 23 22 26 26 C 1.38611 * 119.94610 * 359.74755 * 23 22 21 27 27 C 1.53777 * 87.08451 * 334.56668 * 9 8 6 28 28 H 1.09002 * 109.47379 * 299.99940 * 1 2 3 29 29 H 1.09001 * 109.46782 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.47085 * 60.00143 * 1 2 3 31 31 H 1.08992 * 109.47018 * 300.00694 * 5 3 2 32 32 H 1.09009 * 109.46602 * 60.00278 * 5 3 2 33 33 H 1.08997 * 113.61542 * 254.52728 * 8 6 5 34 34 H 1.08997 * 113.61092 * 25.43041 * 8 6 5 35 35 H 0.97001 * 119.99716 * 72.49790 * 11 9 8 36 36 H 1.08997 * 109.47135 * 299.99598 * 14 12 11 37 37 H 1.08993 * 109.47371 * 59.99976 * 14 12 11 38 38 H 1.08996 * 109.47446 * 315.00291 * 18 17 16 39 39 H 0.96703 * 114.00565 * 59.99894 * 19 18 17 40 40 H 1.48502 * 109.99967 * 180.02562 * 20 18 17 41 41 H 1.48501 * 110.00063 * 301.32117 * 20 18 17 42 42 H 1.08003 * 119.94182 * 179.97438 * 21 17 16 43 43 H 1.07998 * 119.97730 * 179.97438 * 22 21 17 44 44 H 1.08997 * 109.47557 * 179.97438 * 25 24 23 45 45 H 1.09008 * 109.46790 * 299.99484 * 25 24 23 46 46 H 1.08997 * 109.47017 * 59.99189 * 25 24 23 47 47 H 1.08002 * 120.05871 * 180.25579 * 26 23 22 48 48 H 1.08994 * 113.61428 * 270.88409 * 27 9 8 49 49 H 1.09000 * 113.61285 * 139.97863 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 6 4.0001 2.7422 -0.0002 7 1 3.4251 3.3532 -0.6961 8 6 4.1153 3.3512 1.4072 9 6 5.3810 4.0678 0.9079 10 1 5.1836 5.0423 0.4613 11 7 6.4641 4.1013 1.8939 12 6 6.7740 5.2562 2.5154 13 8 6.1567 6.2680 2.2582 14 6 7.8885 5.2908 3.5292 15 8 8.0230 6.6170 4.0443 16 6 8.9908 6.8218 4.9760 17 6 9.1766 8.0855 5.5180 18 6 8.3052 9.2314 5.0721 19 8 7.0088 9.1001 5.6587 20 14 9.0713 10.8412 5.6131 21 6 10.1604 8.2943 6.4658 22 6 10.9614 7.2461 6.8758 23 6 10.7795 5.9802 6.3367 24 8 11.5675 4.9493 6.7407 25 6 12.5628 5.2402 7.7241 26 6 9.7897 5.7669 5.3900 27 6 5.5209 2.9349 -0.1225 28 1 -0.3634 0.5138 0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 -0.8900 31 1 3.9557 0.7810 0.8907 32 1 3.9564 0.7807 -0.8893 33 1 3.2997 4.0294 1.6577 34 1 4.3095 2.6147 2.1870 35 1 6.9580 3.2921 2.0994 36 1 7.6585 4.6061 4.3455 37 1 8.8217 4.9890 3.0538 38 1 8.2155 9.2186 3.9860 39 1 7.0123 9.1037 6.6257 40 1 8.2212 11.9791 5.1800 41 1 9.2282 10.8582 7.0897 42 1 10.3037 9.2788 6.8862 43 1 11.7298 7.4118 7.6164 44 1 13.1196 4.3326 7.9570 45 1 13.2457 5.9966 7.3371 46 1 12.0820 5.6133 8.6283 47 1 9.6439 4.7817 4.9724 48 1 6.0992 2.0847 0.2391 49 1 5.8398 3.2771 -1.1071 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:27:33 Heat of formation + Delta-G solvation = -163.199810 kcal Electronic energy + Delta-G solvation = -32359.969926 eV Core-core repulsion = 27642.208093 eV Total energy + Delta-G solvation = -4717.761833 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -41.84918 -41.62754 -40.96944 -40.10433 -39.27387 -38.17459 -37.38401 -36.89284 -34.85557 -32.29187 -31.91545 -31.26793 -29.45820 -28.52765 -28.31507 -26.82759 -26.05906 -24.78575 -23.48308 -22.45776 -21.94469 -21.58758 -20.61584 -19.95729 -18.64068 -18.44530 -18.01156 -17.93187 -17.66184 -17.53405 -17.46464 -17.20965 -16.80221 -16.75085 -16.42596 -16.19662 -15.90620 -15.58913 -15.40648 -15.13823 -14.83838 -14.66493 -14.47932 -14.46129 -13.91008 -13.67372 -13.64438 -13.51772 -13.44759 -13.39038 -13.12776 -12.99260 -12.88635 -12.54953 -12.27710 -12.20359 -11.95777 -11.94185 -11.76113 -11.68195 -11.52178 -11.47594 -11.35947 -10.80485 -10.35917 -10.10324 -9.68735 -9.06940 -4.87627 0.22178 0.34364 1.23882 1.40732 1.44694 1.52837 1.64135 1.73744 2.06400 2.15643 2.57649 2.60234 3.31397 3.34614 3.50115 3.59960 3.64940 3.68991 3.70764 3.80437 3.83910 3.88189 3.94895 4.01806 4.03916 4.14105 4.17139 4.18326 4.23665 4.26434 4.28513 4.38311 4.40164 4.41768 4.52235 4.54272 4.60012 4.67581 4.74045 4.78258 4.90905 5.02868 5.05185 5.18381 5.23989 5.29436 5.41744 5.45651 5.49707 6.12546 6.31275 6.40695 6.64780 6.77013 7.14416 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.100 4.100 7 H 0.108 0.892 8 C -0.148 4.148 9 C 0.126 3.874 10 H 0.120 0.880 11 N -0.718 5.718 12 C 0.516 3.484 13 O -0.507 6.507 14 C 0.036 3.964 15 O -0.272 6.272 16 C 0.193 3.807 17 C -0.181 4.181 18 C -0.059 4.059 19 O -0.521 6.521 20 Si 0.686 3.314 21 C -0.043 4.043 22 C -0.239 4.239 23 C 0.174 3.826 24 O -0.315 6.315 25 C 0.025 3.975 26 C -0.247 4.247 27 C -0.139 4.139 28 H 0.063 0.937 29 H 0.102 0.898 30 H 0.064 0.936 31 H 0.107 0.893 32 H 0.110 0.890 33 H 0.078 0.922 34 H 0.086 0.914 35 H 0.402 0.598 36 H 0.095 0.905 37 H 0.096 0.904 38 H 0.118 0.882 39 H 0.369 0.631 40 H -0.257 1.257 41 H -0.261 1.261 42 H 0.138 0.862 43 H 0.134 0.866 44 H 0.103 0.897 45 H 0.060 0.940 46 H 0.058 0.942 47 H 0.138 0.862 48 H 0.091 0.909 49 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.432 -6.381 0.785 9.094 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.300 3.700 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.186 4.186 9 C 0.021 3.979 10 H 0.137 0.863 11 N -0.372 5.372 12 C 0.301 3.699 13 O -0.380 6.380 14 C -0.042 4.042 15 O -0.183 6.183 16 C 0.146 3.854 17 C -0.183 4.183 18 C -0.169 4.169 19 O -0.326 6.326 20 Si 0.588 3.412 21 C -0.060 4.060 22 C -0.258 4.258 23 C 0.128 3.872 24 O -0.228 6.228 25 C -0.069 4.069 26 C -0.267 4.267 27 C -0.177 4.177 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.083 0.917 31 H 0.126 0.874 32 H 0.128 0.872 33 H 0.097 0.903 34 H 0.104 0.896 35 H 0.237 0.763 36 H 0.113 0.887 37 H 0.114 0.886 38 H 0.136 0.864 39 H 0.216 0.784 40 H -0.182 1.182 41 H -0.186 1.186 42 H 0.156 0.844 43 H 0.152 0.848 44 H 0.121 0.879 45 H 0.078 0.922 46 H 0.077 0.923 47 H 0.156 0.844 48 H 0.110 0.890 49 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 5.331 -4.666 0.301 7.091 hybrid contribution -0.502 -1.148 1.178 1.720 sum 4.829 -5.814 1.480 7.701 Atomic orbital electron populations 1.23301 0.75939 1.03923 1.02722 1.86502 1.23794 1.33549 1.84102 1.23822 0.92311 0.81398 0.72432 1.90702 1.67232 1.36297 1.44736 1.21404 0.87620 0.98851 1.06081 1.22254 0.96165 0.94189 0.99233 0.87361 1.23577 0.98411 1.00197 0.96442 1.22514 0.86247 1.00064 0.89059 0.86261 1.45794 1.37366 1.11078 1.42926 1.20043 0.84207 0.83905 0.81783 1.90809 1.51397 1.33160 1.62604 1.22535 0.99093 0.85139 0.97474 1.86267 1.50621 1.28438 1.52948 1.18404 0.86681 0.92643 0.87665 1.19513 1.02168 0.93907 1.02688 1.24822 0.86000 1.03278 1.02837 1.86705 1.26810 1.94818 1.24275 0.95221 0.88214 0.76149 0.81617 1.20780 0.92475 0.98999 0.93786 1.21116 1.05550 0.92445 1.06709 1.18690 0.89608 0.86675 0.92207 1.86073 1.45814 1.33900 1.57001 1.23147 0.89926 1.03546 0.90328 1.20391 1.01054 0.99911 1.05323 1.23433 0.95738 0.98434 1.00087 0.91785 0.87920 0.91749 0.87435 0.87165 0.90298 0.89562 0.76312 0.88708 0.88574 0.86444 0.78413 1.18197 1.18648 0.84446 0.84788 0.87883 0.92152 0.92316 0.84414 0.89020 0.89930 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.41 10.57 -39.25 -0.41 -0.83 16 3 C 0.46 0.60 7.96 36.01 0.29 0.89 16 4 O -0.50 -2.28 15.51 -18.75 -0.29 -2.57 16 5 C -0.10 0.24 5.65 -27.88 -0.16 0.09 16 6 C -0.10 0.17 3.15 -89.80 -0.28 -0.12 16 7 H 0.11 -0.01 7.68 -51.93 -0.40 -0.41 16 8 C -0.15 0.09 7.43 -25.92 -0.19 -0.10 16 9 C 0.13 -0.10 4.24 -67.12 -0.28 -0.38 16 10 H 0.12 0.18 7.47 -51.93 -0.39 -0.21 16 11 N -0.72 1.11 5.35 -53.02 -0.28 0.83 16 12 C 0.52 1.00 7.91 -10.99 -0.09 0.91 16 13 O -0.51 -3.66 16.10 -14.36 -0.23 -3.89 16 14 C 0.04 -0.01 5.22 36.01 0.19 0.18 16 15 O -0.27 -0.97 8.99 -39.29 -0.35 -1.33 16 16 C 0.19 0.48 6.66 -39.24 -0.26 0.22 16 17 C -0.18 -0.36 5.27 -104.44 -0.55 -0.91 16 18 C -0.06 -0.15 2.37 36.01 0.09 -0.06 16 19 O -0.52 -2.23 12.88 -35.23 -0.45 -2.68 16 20 Si 0.69 0.28 30.24 -169.99 -5.14 -4.87 16 21 C -0.04 -0.02 8.65 -39.63 -0.34 -0.36 16 22 C -0.24 -0.05 9.04 -39.41 -0.36 -0.40 16 23 C 0.17 0.22 6.68 -39.24 -0.26 -0.05 16 24 O -0.32 -0.27 10.49 -19.41 -0.20 -0.47 16 25 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 26 C -0.25 -0.30 8.97 -39.29 -0.35 -0.65 16 27 C -0.14 0.46 7.39 -25.92 -0.19 0.27 16 28 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 29 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 30 H 0.06 -0.02 8.13 -51.93 -0.42 -0.45 16 31 H 0.11 -0.44 7.84 -51.93 -0.41 -0.84 16 32 H 0.11 -0.45 8.14 -51.92 -0.42 -0.88 16 33 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 34 H 0.09 -0.15 7.90 -51.93 -0.41 -0.56 16 35 H 0.40 -2.00 8.73 -40.82 -0.36 -2.36 16 36 H 0.10 -0.23 7.65 -51.93 -0.40 -0.63 16 37 H 0.10 -0.28 7.67 -51.93 -0.40 -0.68 16 38 H 0.12 0.39 7.82 -51.93 -0.41 -0.02 16 39 H 0.37 0.29 8.70 45.56 0.40 0.69 16 40 H -0.26 -1.00 7.11 56.52 0.40 -0.60 16 41 H -0.26 -0.35 6.68 56.52 0.38 0.03 16 42 H 0.14 -0.17 4.85 -52.48 -0.25 -0.43 16 43 H 0.13 -0.26 6.29 -52.49 -0.33 -0.59 16 44 H 0.10 -0.41 8.14 -51.93 -0.42 -0.83 16 45 H 0.06 -0.20 7.66 -51.92 -0.40 -0.60 16 46 H 0.06 -0.19 7.66 -51.93 -0.40 -0.58 16 47 H 0.14 -0.11 6.30 -52.49 -0.33 -0.44 16 48 H 0.09 -0.47 8.08 -51.93 -0.42 -0.89 16 49 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 LS Contribution 410.16 15.07 6.18 6.18 Total: 0.00 -12.57 410.16 -8.97 -21.54 By element: Atomic # 1 Polarization: -6.33 SS G_CDS: -7.08 Total: -13.40 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -0.70 Total: 1.50 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -0.28 Total: 0.83 kcal Atomic # 8 Polarization: -9.83 SS G_CDS: -1.95 Total: -11.78 kcal Atomic # 14 Polarization: 0.28 SS G_CDS: -5.14 Total: -4.87 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -12.57 -8.97 -21.54 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.659 kcal (2) G-P(sol) polarization free energy of solvation -12.570 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.229 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.971 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.200 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds