Wall clock time and date at job start Sun Mar 7 2021 14:27:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 116.99985 * 2 1 4 4 O 1.20826 * 120.00319 * 359.97438 * 3 2 1 5 5 C 1.50706 * 120.00394 * 179.97438 * 3 2 1 6 6 C 1.52997 * 109.47226 * 179.97438 * 5 3 2 7 7 H 1.09002 * 112.85102 * 316.20065 * 6 5 3 8 8 C 1.53785 * 113.61259 * 87.50826 * 6 5 3 9 9 C 1.53780 * 87.07949 * 139.97751 * 8 6 5 10 10 H 1.09003 * 113.61582 * 89.11778 * 9 8 6 11 11 N 1.46503 * 113.61333 * 220.01563 * 9 8 6 12 12 C 1.34770 * 120.00115 * 252.50160 * 11 9 8 13 13 O 1.21285 * 120.00383 * 359.97438 * 12 11 9 14 14 C 1.50699 * 119.99909 * 180.02562 * 12 11 9 15 15 O 1.42904 * 109.47361 * 180.02562 * 14 12 11 16 16 C 1.35887 * 117.00302 * 180.02562 * 15 14 12 17 17 C 1.38755 * 120.03124 * 179.97438 * 16 15 14 18 18 C 1.50705 * 119.96736 * 359.95089 * 17 16 15 19 19 O 1.42895 * 109.46936 * 75.00367 * 18 17 16 20 20 Si 1.86304 * 109.46981 * 195.00007 * 18 17 16 21 21 C 1.38196 * 120.05698 * 179.97438 * 17 16 15 22 22 C 1.38148 * 120.11195 * 0.02562 * 21 17 16 23 23 C 1.38795 * 120.05240 * 359.97438 * 22 21 17 24 24 O 1.35896 * 120.02751 * 180.02562 * 23 22 21 25 25 C 1.42904 * 117.00108 * 0.02562 * 24 23 22 26 26 C 1.38611 * 119.94610 * 359.74755 * 23 22 21 27 27 C 1.53777 * 87.08451 * 334.56668 * 9 8 6 28 28 H 1.09002 * 109.47379 * 299.99940 * 1 2 3 29 29 H 1.09001 * 109.46782 * 180.02562 * 1 2 3 30 30 H 1.09004 * 109.47085 * 60.00143 * 1 2 3 31 31 H 1.08992 * 109.47018 * 300.00694 * 5 3 2 32 32 H 1.09009 * 109.46602 * 60.00278 * 5 3 2 33 33 H 1.08997 * 113.61542 * 254.52728 * 8 6 5 34 34 H 1.08997 * 113.61092 * 25.43041 * 8 6 5 35 35 H 0.97001 * 119.99716 * 72.49790 * 11 9 8 36 36 H 1.08997 * 109.47135 * 299.99598 * 14 12 11 37 37 H 1.08993 * 109.47371 * 59.99976 * 14 12 11 38 38 H 1.08996 * 109.47446 * 315.00291 * 18 17 16 39 39 H 0.96703 * 114.00565 * 59.99894 * 19 18 17 40 40 H 1.48502 * 109.99967 * 180.02562 * 20 18 17 41 41 H 1.48501 * 110.00063 * 301.32117 * 20 18 17 42 42 H 1.08003 * 119.94182 * 179.97438 * 21 17 16 43 43 H 1.07998 * 119.97730 * 179.97438 * 22 21 17 44 44 H 1.08997 * 109.47557 * 179.97438 * 25 24 23 45 45 H 1.09008 * 109.46790 * 299.99484 * 25 24 23 46 46 H 1.08997 * 109.47017 * 59.99189 * 25 24 23 47 47 H 1.08002 * 120.05871 * 180.25579 * 26 23 22 48 48 H 1.08994 * 113.61428 * 270.88409 * 27 9 8 49 49 H 1.09000 * 113.61285 * 139.97863 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 6 4.0001 2.7422 -0.0002 7 1 3.4251 3.3532 -0.6961 8 6 4.1153 3.3512 1.4072 9 6 5.3810 4.0678 0.9079 10 1 5.1836 5.0423 0.4613 11 7 6.4641 4.1013 1.8939 12 6 6.7740 5.2562 2.5154 13 8 6.1567 6.2680 2.2582 14 6 7.8885 5.2908 3.5292 15 8 8.0230 6.6170 4.0443 16 6 8.9908 6.8218 4.9760 17 6 9.1766 8.0855 5.5180 18 6 8.3052 9.2314 5.0721 19 8 7.0088 9.1001 5.6587 20 14 9.0713 10.8412 5.6131 21 6 10.1604 8.2943 6.4658 22 6 10.9614 7.2461 6.8758 23 6 10.7795 5.9802 6.3367 24 8 11.5675 4.9493 6.7407 25 6 12.5628 5.2402 7.7241 26 6 9.7897 5.7669 5.3900 27 6 5.5209 2.9349 -0.1225 28 1 -0.3634 0.5138 0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5138 -0.8900 31 1 3.9557 0.7810 0.8907 32 1 3.9564 0.7807 -0.8893 33 1 3.2997 4.0294 1.6577 34 1 4.3095 2.6147 2.1870 35 1 6.9580 3.2921 2.0994 36 1 7.6585 4.6061 4.3455 37 1 8.8217 4.9890 3.0538 38 1 8.2155 9.2186 3.9860 39 1 7.0123 9.1037 6.6257 40 1 8.2212 11.9791 5.1800 41 1 9.2282 10.8582 7.0897 42 1 10.3037 9.2788 6.8862 43 1 11.7298 7.4118 7.6164 44 1 13.1196 4.3326 7.9570 45 1 13.2457 5.9966 7.3371 46 1 12.0820 5.6133 8.6283 47 1 9.6439 4.7817 4.9724 48 1 6.0992 2.0847 0.2391 49 1 5.8398 3.2771 -1.1071 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:27:31 Heat of formation + Delta-G solvation = -166.919143 kcal Electronic energy + Delta-G solvation = -32360.131208 eV Core-core repulsion = 27642.208093 eV Total energy + Delta-G solvation = -4717.923116 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -41.89297 -41.67165 -41.04304 -40.09136 -39.34016 -38.32610 -37.51103 -37.01016 -34.94840 -32.32155 -31.88668 -31.26490 -29.47446 -28.39771 -28.25244 -26.71132 -26.13693 -24.78339 -23.49791 -22.50033 -21.98648 -21.64502 -20.53568 -19.96465 -18.70683 -18.51789 -18.11387 -17.99472 -17.69259 -17.58299 -17.50964 -17.21624 -16.80923 -16.66377 -16.49059 -16.17992 -16.03134 -15.62579 -15.49355 -15.17824 -14.83568 -14.74999 -14.51201 -14.49701 -13.95519 -13.76281 -13.51801 -13.45715 -13.37936 -13.33731 -13.14665 -12.94017 -12.82953 -12.47404 -12.30658 -12.18820 -12.02289 -11.88777 -11.82814 -11.65884 -11.63202 -11.49685 -11.34921 -10.98368 -10.52229 -10.13965 -9.70168 -9.10601 -4.93958 0.19946 0.30583 1.17019 1.30922 1.40670 1.44956 1.54810 1.78120 1.95752 2.25449 2.56111 2.60090 3.41480 3.45944 3.48777 3.53766 3.71994 3.75487 3.79227 3.80534 3.89234 3.94784 4.05437 4.06612 4.17133 4.24199 4.26034 4.28747 4.34887 4.40652 4.43209 4.46298 4.47455 4.62213 4.65591 4.67714 4.73164 4.78013 4.79915 4.85227 4.99488 5.02115 5.08507 5.22216 5.23455 5.27691 5.39856 5.46796 5.55838 6.13734 6.36263 6.46316 6.56456 6.70618 7.12790 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.453 3.547 4 O -0.546 6.546 5 C -0.095 4.095 6 C -0.098 4.098 7 H 0.084 0.916 8 C -0.149 4.149 9 C 0.115 3.885 10 H 0.086 0.914 11 N -0.696 5.696 12 C 0.512 3.488 13 O -0.573 6.573 14 C 0.035 3.965 15 O -0.305 6.305 16 C 0.176 3.824 17 C -0.196 4.196 18 C -0.079 4.079 19 O -0.550 6.550 20 Si 0.782 3.218 21 C -0.041 4.041 22 C -0.238 4.238 23 C 0.165 3.835 24 O -0.329 6.329 25 C 0.016 3.984 26 C -0.251 4.251 27 C -0.113 4.113 28 H 0.057 0.943 29 H 0.129 0.871 30 H 0.058 0.942 31 H 0.135 0.865 32 H 0.137 0.863 33 H 0.042 0.958 34 H 0.105 0.895 35 H 0.423 0.577 36 H 0.120 0.880 37 H 0.127 0.873 38 H 0.096 0.904 39 H 0.381 0.619 40 H -0.309 1.309 41 H -0.262 1.262 42 H 0.155 0.845 43 H 0.157 0.843 44 H 0.117 0.883 45 H 0.070 0.930 46 H 0.066 0.934 47 H 0.155 0.845 48 H 0.126 0.874 49 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.152 -8.756 1.748 12.786 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C 0.298 3.702 4 O -0.436 6.436 5 C -0.132 4.132 6 C -0.118 4.118 7 H 0.102 0.898 8 C -0.188 4.188 9 C 0.010 3.990 10 H 0.104 0.896 11 N -0.350 5.350 12 C 0.298 3.702 13 O -0.451 6.451 14 C -0.043 4.043 15 O -0.217 6.217 16 C 0.130 3.870 17 C -0.198 4.198 18 C -0.186 4.186 19 O -0.358 6.358 20 Si 0.686 3.314 21 C -0.059 4.059 22 C -0.256 4.256 23 C 0.119 3.881 24 O -0.242 6.242 25 C -0.078 4.078 26 C -0.270 4.270 27 C -0.151 4.151 28 H 0.075 0.925 29 H 0.147 0.853 30 H 0.077 0.923 31 H 0.153 0.847 32 H 0.155 0.845 33 H 0.061 0.939 34 H 0.123 0.877 35 H 0.262 0.738 36 H 0.138 0.862 37 H 0.145 0.855 38 H 0.114 0.886 39 H 0.230 0.770 40 H -0.238 1.238 41 H -0.188 1.188 42 H 0.173 0.827 43 H 0.175 0.825 44 H 0.135 0.865 45 H 0.089 0.911 46 H 0.085 0.915 47 H 0.173 0.827 48 H 0.144 0.856 49 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 8.089 -7.152 1.271 10.872 hybrid contribution -1.413 -0.473 0.868 1.724 sum 6.676 -7.625 2.139 10.358 Atomic orbital electron populations 1.23471 0.75418 1.05468 1.02160 1.86508 1.24503 1.33470 1.83815 1.24656 0.93779 0.80777 0.70992 1.90692 1.68434 1.37606 1.46866 1.21544 0.84788 0.98291 1.08543 1.22146 0.97347 0.94601 0.97669 0.89800 1.23608 0.97219 1.00097 0.97860 1.22467 0.86699 0.99643 0.90156 0.89573 1.45637 1.36676 1.11014 1.41646 1.20578 0.84102 0.83734 0.81805 1.90782 1.53852 1.35596 1.64902 1.22764 0.99432 0.84350 0.97745 1.86227 1.51371 1.30509 1.53578 1.18594 0.87032 0.93352 0.88009 1.19604 1.02799 0.93715 1.03635 1.25173 0.85758 1.05796 1.01898 1.86655 1.28373 1.95251 1.25516 0.94128 0.86205 0.71348 0.79704 1.20939 0.91819 0.99968 0.93150 1.21398 1.05655 0.91912 1.06678 1.18865 0.89727 0.87235 0.92289 1.86054 1.46331 1.34077 1.57779 1.23407 0.89607 1.04805 0.89999 1.20557 1.00798 1.00284 1.05367 1.23359 0.94480 0.97903 0.99372 0.92454 0.85321 0.92303 0.84733 0.84492 0.93884 0.87652 0.73779 0.86247 0.85518 0.88552 0.77035 1.23775 1.18767 0.82737 0.82509 0.86495 0.91092 0.91534 0.82747 0.85608 0.89441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 113.37 1.20 1.18 16 2 O -0.37 -0.80 10.57 -51.40 -0.54 -1.34 16 3 C 0.45 1.39 7.96 71.24 0.57 1.96 16 4 O -0.55 -6.12 15.51 21.96 0.34 -5.78 16 5 C -0.09 0.59 5.65 29.85 0.17 0.76 16 6 C -0.10 0.30 3.15 -10.27 -0.03 0.27 16 7 H 0.08 0.18 7.68 -2.39 -0.02 0.16 16 8 C -0.15 -0.01 7.43 31.12 0.23 0.22 16 9 C 0.12 -0.05 4.24 45.52 0.19 0.14 16 10 H 0.09 0.57 7.47 -2.39 -0.02 0.55 16 11 N -0.70 2.12 5.35 -440.04 -2.36 -0.23 16 12 C 0.51 2.77 7.91 87.66 0.69 3.46 16 13 O -0.57 -10.42 16.10 15.99 0.26 -10.16 16 14 C 0.03 0.00 5.22 71.24 0.37 0.37 16 15 O -0.30 -2.74 8.99 -73.24 -0.66 -3.40 16 16 C 0.18 1.03 6.66 22.49 0.15 1.18 16 17 C -0.20 -0.94 5.27 -19.75 -0.10 -1.05 16 18 C -0.08 -0.54 2.37 71.24 0.17 -0.37 16 19 O -0.55 -6.09 12.88 -148.98 -1.92 -8.00 16 20 Si 0.78 1.02 30.24 68.60 2.07 3.10 16 21 C -0.04 0.00 8.65 22.24 0.19 0.19 16 22 C -0.24 0.23 9.04 22.38 0.20 0.44 16 23 C 0.17 0.24 6.68 22.49 0.15 0.39 16 24 O -0.33 -0.10 10.49 -92.38 -0.97 -1.07 16 25 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 26 C -0.25 -0.50 8.97 22.46 0.20 -0.30 16 27 C -0.11 0.89 7.39 31.12 0.23 1.12 16 28 H 0.06 0.04 8.13 -2.39 -0.02 0.02 16 29 H 0.13 -0.81 8.14 -2.39 -0.02 -0.83 16 30 H 0.06 0.03 8.13 -2.38 -0.02 0.01 16 31 H 0.13 -1.50 7.84 -2.39 -0.02 -1.52 16 32 H 0.14 -1.51 8.14 -2.38 -0.02 -1.53 16 33 H 0.04 0.31 8.14 -2.39 -0.02 0.29 16 34 H 0.11 -0.43 7.90 -2.39 -0.02 -0.45 16 35 H 0.42 -5.03 8.73 -92.71 -0.81 -5.84 16 36 H 0.12 -0.67 7.65 -2.39 -0.02 -0.69 16 37 H 0.13 -0.87 7.67 -2.39 -0.02 -0.89 16 38 H 0.10 0.98 7.82 -2.39 -0.02 0.96 16 39 H 0.38 1.30 8.70 -74.05 -0.64 0.66 16 40 H -0.31 -3.06 7.11 99.48 0.71 -2.35 16 41 H -0.26 -0.37 6.68 99.48 0.66 0.30 16 42 H 0.16 -0.62 4.85 -2.91 -0.01 -0.64 16 43 H 0.16 -0.97 6.29 -2.91 -0.02 -0.99 16 44 H 0.12 -1.14 8.14 -2.39 -0.02 -1.16 16 45 H 0.07 -0.63 7.66 -2.38 -0.02 -0.64 16 46 H 0.07 -0.55 7.66 -2.39 -0.02 -0.57 16 47 H 0.15 -0.43 6.30 -2.91 -0.02 -0.45 16 48 H 0.13 -1.79 8.08 -2.39 -0.02 -1.81 16 49 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 Total: 0.00 -35.48 410.16 1.47 -34.02 By element: Atomic # 1 Polarization: -17.64 SS G_CDS: -0.45 Total: -18.09 kcal Atomic # 6 Polarization: 5.27 SS G_CDS: 5.69 Total: 10.96 kcal Atomic # 7 Polarization: 2.12 SS G_CDS: -2.36 Total: -0.23 kcal Atomic # 8 Polarization: -26.26 SS G_CDS: -3.49 Total: -29.75 kcal Atomic # 14 Polarization: 1.02 SS G_CDS: 2.07 Total: 3.10 kcal Total: -35.48 1.47 -34.02 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.900 kcal (2) G-P(sol) polarization free energy of solvation -35.485 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -168.385 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.466 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.019 kcal (6) G-S(sol) free energy of system = (1) + (5) -166.919 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds