Wall clock time and date at job start Sun Mar 7 2021 14:27:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34227 * 116.99807 * 2 1 4 4 O 1.20817 * 120.00579 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99643 * 180.02562 * 3 2 1 6 6 C 1.53000 * 109.47199 * 180.02562 * 5 3 2 7 7 H 1.08994 * 112.85010 * 316.19461 * 6 5 3 8 8 C 1.53953 * 113.74398 * 87.39920 * 6 5 3 9 9 C 1.53775 * 87.02105 * 139.94558 * 8 6 5 10 10 H 1.08998 * 113.61669 * 89.22750 * 9 8 6 11 11 N 1.46503 * 113.61467 * 220.04696 * 9 8 6 12 12 C 1.34769 * 120.00142 * 254.13373 * 11 9 8 13 13 O 1.21701 * 120.00276 * 5.15528 * 12 11 9 14 14 C 1.46674 * 120.00307 * 185.15155 * 12 11 9 15 15 C 1.37890 * 126.22423 * 355.02374 * 14 12 11 16 16 C 1.39874 * 107.09640 * 179.75797 * 15 14 12 17 17 Br 1.89098 * 126.07679 * 180.21940 * 16 15 14 18 18 C 1.35506 * 107.84943 * 0.35528 * 16 15 14 19 19 C 1.50705 * 125.57064 * 179.90389 * 18 16 15 20 20 O 1.42908 * 109.46878 * 235.06591 * 19 18 16 21 21 Si 1.86299 * 109.47084 * 115.06850 * 19 18 16 22 22 N 1.35598 * 108.85935 * 359.63750 * 18 16 15 23 23 C 1.46504 * 125.67990 * 180.20661 * 22 18 16 24 24 C 1.53781 * 113.61440 * 184.99610 * 6 5 3 25 25 H 1.09002 * 109.47437 * 59.99618 * 1 2 3 26 26 H 1.08996 * 109.47010 * 179.97438 * 1 2 3 27 27 H 1.09004 * 109.47158 * 299.99831 * 1 2 3 28 28 H 1.08999 * 109.47305 * 59.99866 * 5 3 2 29 29 H 1.09009 * 109.46823 * 300.00083 * 5 3 2 30 30 H 1.09002 * 113.61460 * 25.42051 * 8 6 5 31 31 H 1.09007 * 113.66792 * 254.47622 * 8 6 5 32 32 H 0.96999 * 119.99824 * 74.13780 * 11 9 8 33 33 H 1.08002 * 126.45179 * 359.97418 * 15 14 12 34 34 H 1.08998 * 109.47267 * 355.06605 * 19 18 16 35 35 H 0.96696 * 113.99553 * 179.97438 * 20 19 18 36 36 H 1.48496 * 109.99935 * 303.80618 * 21 19 18 37 37 H 1.48501 * 109.99867 * 65.12728 * 21 19 18 38 38 H 1.08998 * 109.47013 * 95.55756 * 23 22 18 39 39 H 1.09002 * 109.46830 * 215.55870 * 23 22 18 40 40 H 1.09003 * 109.46520 * 335.55488 * 23 22 18 41 41 H 1.09004 * 113.61315 * 105.38826 * 24 6 5 42 42 H 1.08996 * 113.61512 * 334.48484 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2748 -0.0006 6 6 4.0002 2.7420 0.0002 7 1 3.4248 3.3539 -0.6944 8 6 4.1153 3.3537 1.4083 9 6 5.3815 4.0680 0.9072 10 1 5.1852 5.0426 0.4604 11 7 6.4651 4.1018 1.8926 12 6 6.7551 5.2498 2.5362 13 8 6.0585 6.2337 2.3693 14 6 7.9102 5.3136 3.4378 15 6 8.7244 4.2596 3.7947 16 6 9.6974 4.7670 4.6620 17 35 11.0928 3.7793 5.4703 18 6 9.4607 6.0915 4.8226 19 6 10.2711 7.0294 5.6798 20 8 9.4099 7.6881 6.6107 21 14 11.1023 8.2979 4.5979 22 7 8.3790 6.4364 4.0812 23 6 7.8044 7.7805 3.9819 24 6 5.5209 2.9348 -0.1230 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3634 0.5138 0.8900 28 1 3.9557 0.7809 -0.8908 29 1 3.9564 0.7804 0.8892 30 1 4.3088 2.6183 2.1893 31 1 3.3004 4.0333 1.6581 32 1 6.9738 3.2979 2.0817 33 1 8.6309 3.2358 3.4638 34 1 11.0278 6.4631 6.2228 35 1 9.8650 8.3082 7.1967 36 1 11.9294 7.6220 3.5662 37 1 10.0813 9.1578 3.9471 38 1 8.2021 8.2813 3.0992 39 1 6.7200 7.7068 3.9003 40 1 8.0638 8.3531 4.8724 41 1 5.8393 3.2768 -1.1079 42 1 6.0995 2.0847 0.2384 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_5000100.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:27:36 Heat of formation + Delta-G solvation = -71.271039 kcal Electronic energy + Delta-G solvation = -27251.350262 eV Core-core repulsion = 23053.458989 eV Total energy + Delta-G solvation = -4197.891273 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.056 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.84089 -41.65470 -40.78595 -39.25149 -37.83681 -37.39505 -35.20062 -34.25109 -32.42896 -31.49529 -30.90049 -28.51699 -27.37030 -27.12989 -26.84425 -24.54605 -23.02483 -21.92994 -21.46674 -20.86326 -20.20084 -18.84385 -18.62575 -18.48992 -17.85418 -17.52497 -17.24794 -16.97374 -16.77571 -16.23165 -15.98055 -15.65000 -15.40159 -14.86234 -14.70301 -14.48683 -14.39220 -14.32941 -14.17328 -13.88943 -13.77888 -13.66479 -13.46819 -13.23282 -13.01002 -12.89833 -12.83442 -12.23626 -12.04660 -11.96833 -11.86651 -11.76565 -11.49571 -11.36983 -11.27741 -10.97512 -10.71538 -10.16597 -9.78646 -9.26464 -5.20069 0.16704 0.64449 0.91693 1.23413 1.25492 1.45106 1.52207 1.72642 1.83372 2.19641 2.26816 3.01646 3.29498 3.33623 3.49640 3.56739 3.64175 3.70478 3.77495 3.83750 4.00277 4.16265 4.16859 4.21290 4.23089 4.28009 4.28426 4.39731 4.42064 4.53972 4.59235 4.62408 4.63780 4.66273 4.74260 4.89430 5.01284 5.16610 5.23583 5.41546 5.47391 5.61858 5.82538 6.35430 6.37995 6.76479 7.06447 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.146 4.146 9 C 0.127 3.873 10 H 0.118 0.882 11 N -0.707 5.707 12 C 0.593 3.407 13 O -0.538 6.538 14 C -0.033 4.033 15 C -0.111 4.111 16 C -0.160 4.160 17 Br -0.016 7.016 18 C 0.092 3.908 19 C -0.053 4.053 20 O -0.545 6.545 21 Si 0.685 3.315 22 N -0.387 5.387 23 C 0.057 3.943 24 C -0.139 4.139 25 H 0.064 0.936 26 H 0.102 0.898 27 H 0.063 0.937 28 H 0.111 0.889 29 H 0.108 0.892 30 H 0.087 0.913 31 H 0.079 0.921 32 H 0.404 0.596 33 H 0.158 0.842 34 H 0.097 0.903 35 H 0.390 0.610 36 H -0.249 1.249 37 H -0.246 1.246 38 H 0.077 0.923 39 H 0.108 0.892 40 H 0.102 0.898 41 H 0.082 0.918 42 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.632 -1.682 0.525 4.037 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.185 4.185 9 C 0.022 3.978 10 H 0.136 0.864 11 N -0.357 5.357 12 C 0.380 3.620 13 O -0.416 6.416 14 C -0.148 4.148 15 C -0.138 4.138 16 C -0.246 4.246 17 Br 0.068 6.932 18 C -0.029 4.029 19 C -0.163 4.163 20 O -0.352 6.352 21 Si 0.584 3.416 22 N -0.059 5.059 23 C -0.083 4.083 24 C -0.177 4.177 25 H 0.082 0.918 26 H 0.121 0.879 27 H 0.082 0.918 28 H 0.129 0.871 29 H 0.126 0.874 30 H 0.105 0.895 31 H 0.097 0.903 32 H 0.240 0.760 33 H 0.176 0.824 34 H 0.115 0.885 35 H 0.238 0.762 36 H -0.173 1.173 37 H -0.170 1.170 38 H 0.096 0.904 39 H 0.126 0.874 40 H 0.120 0.880 41 H 0.101 0.899 42 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 2.870 -0.709 -0.486 2.997 hybrid contribution -0.607 -0.752 0.039 0.967 sum 2.263 -1.461 -0.447 2.731 Atomic orbital electron populations 1.23300 0.75943 1.03932 1.02704 1.86506 1.23788 1.33530 1.84082 1.23811 0.92299 0.81396 0.72397 1.90695 1.67240 1.36308 1.44798 1.21403 0.87635 0.98811 1.06149 1.22276 0.96072 0.94235 0.99207 0.87394 1.23599 0.98250 1.00194 0.96458 1.22536 0.86239 1.00033 0.88959 0.86409 1.45613 1.36641 1.11644 1.41849 1.16860 0.82406 0.83555 0.79169 1.90833 1.51024 1.35552 1.64220 1.20091 1.01565 0.86973 1.06202 1.21204 0.94483 0.98412 0.99680 1.20750 1.01793 0.93024 1.09029 1.96668 1.44320 1.71716 1.80496 1.19559 0.91158 0.93242 0.98931 1.24357 0.95143 1.00091 0.96687 1.86453 1.36663 1.61194 1.50886 0.95654 0.82291 0.80977 0.82717 1.43787 1.21067 1.08784 1.32282 1.22601 1.02129 0.79484 1.04115 1.23433 0.95827 0.98418 0.99995 0.91772 0.87913 0.91779 0.87128 0.87371 0.89471 0.90271 0.76018 0.82444 0.88476 0.76153 1.17346 1.17019 0.90417 0.87351 0.87998 0.89884 0.88906 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.44 10.57 -39.25 -0.41 -0.85 16 3 C 0.46 0.63 7.96 36.01 0.29 0.91 16 4 O -0.50 -2.27 15.51 -18.74 -0.29 -2.56 16 5 C -0.10 0.23 5.65 -27.88 -0.16 0.07 16 6 C -0.10 0.16 3.15 -89.72 -0.28 -0.12 16 7 H 0.11 -0.02 7.68 -51.93 -0.40 -0.42 16 8 C -0.15 0.07 7.45 -25.83 -0.19 -0.13 16 9 C 0.13 -0.08 4.18 -67.12 -0.28 -0.36 16 10 H 0.12 0.14 7.57 -51.93 -0.39 -0.26 16 11 N -0.71 0.26 5.35 -54.33 -0.29 -0.03 16 12 C 0.59 1.77 7.77 -12.86 -0.10 1.68 16 13 O -0.54 -3.24 14.43 5.19 0.07 -3.17 16 14 C -0.03 -0.10 6.89 -81.98 -0.56 -0.66 16 15 C -0.11 -0.16 10.34 -39.10 -0.40 -0.57 16 16 C -0.16 -0.40 6.53 -39.95 -0.26 -0.66 16 17 Br -0.02 -0.02 33.06 -68.01 -2.25 -2.27 16 18 C 0.09 0.25 5.14 -81.90 -0.42 -0.17 16 19 C -0.05 0.01 2.78 36.01 0.10 0.11 16 20 O -0.54 0.42 11.32 -35.23 -0.40 0.02 16 21 Si 0.69 -0.83 31.36 -169.99 -5.33 -6.16 16 22 N -0.39 -1.29 3.12 -115.58 -0.36 -1.65 16 23 C 0.06 0.13 8.66 59.85 0.52 0.65 16 24 C -0.14 0.43 7.39 -25.92 -0.19 0.23 16 25 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 26 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 27 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 28 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 29 H 0.11 -0.41 7.86 -51.92 -0.41 -0.82 16 30 H 0.09 -0.11 7.91 -51.93 -0.41 -0.52 16 31 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 32 H 0.40 -1.21 7.61 -40.82 -0.31 -1.52 16 33 H 0.16 -0.26 7.45 -52.49 -0.39 -0.65 16 34 H 0.10 -0.12 6.96 -51.93 -0.36 -0.48 16 35 H 0.39 -2.30 8.74 45.56 0.40 -1.91 16 36 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 37 H -0.25 -0.22 6.20 56.52 0.35 0.13 16 38 H 0.08 0.16 7.76 -51.93 -0.40 -0.24 16 39 H 0.11 0.35 6.54 -51.93 -0.34 0.01 16 40 H 0.10 0.12 5.77 -51.93 -0.30 -0.18 16 41 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 42 H 0.09 -0.43 8.07 -51.93 -0.42 -0.85 16 LS Contribution 371.18 15.07 5.59 5.59 Total: 0.00 -10.24 371.18 -10.07 -20.30 By element: Atomic # 1 Polarization: -5.74 SS G_CDS: -5.52 Total: -11.26 kcal Atomic # 6 Polarization: 2.91 SS G_CDS: -0.88 Total: 2.03 kcal Atomic # 7 Polarization: -1.03 SS G_CDS: -0.65 Total: -1.68 kcal Atomic # 8 Polarization: -5.53 SS G_CDS: -1.03 Total: -6.56 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.33 Total: -6.16 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.25 Total: -2.27 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -10.24 -10.07 -20.30 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_5000100.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.967 kcal (2) G-P(sol) polarization free energy of solvation -10.235 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.202 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.069 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.304 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.271 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds