Wall clock time and date at job start Sun Mar 7 2021 14:27:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34227 * 116.99807 * 2 1 4 4 O 1.20817 * 120.00579 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99643 * 180.02562 * 3 2 1 6 6 C 1.53000 * 109.47199 * 180.02562 * 5 3 2 7 7 H 1.08994 * 112.85010 * 316.19461 * 6 5 3 8 8 C 1.53953 * 113.74398 * 87.39920 * 6 5 3 9 9 C 1.53775 * 87.02105 * 139.94558 * 8 6 5 10 10 H 1.08998 * 113.61669 * 89.22750 * 9 8 6 11 11 N 1.46503 * 113.61467 * 220.04696 * 9 8 6 12 12 C 1.34769 * 120.00142 * 254.13373 * 11 9 8 13 13 O 1.21701 * 120.00276 * 5.15528 * 12 11 9 14 14 C 1.46674 * 120.00307 * 185.15155 * 12 11 9 15 15 C 1.37890 * 126.22423 * 355.02374 * 14 12 11 16 16 C 1.39874 * 107.09640 * 179.75797 * 15 14 12 17 17 Br 1.89098 * 126.07679 * 180.21940 * 16 15 14 18 18 C 1.35506 * 107.84943 * 0.35528 * 16 15 14 19 19 C 1.50705 * 125.57064 * 179.90389 * 18 16 15 20 20 O 1.42908 * 109.46878 * 235.06591 * 19 18 16 21 21 Si 1.86299 * 109.47084 * 115.06850 * 19 18 16 22 22 N 1.35598 * 108.85935 * 359.63750 * 18 16 15 23 23 C 1.46504 * 125.67990 * 180.20661 * 22 18 16 24 24 C 1.53781 * 113.61440 * 184.99610 * 6 5 3 25 25 H 1.09002 * 109.47437 * 59.99618 * 1 2 3 26 26 H 1.08996 * 109.47010 * 179.97438 * 1 2 3 27 27 H 1.09004 * 109.47158 * 299.99831 * 1 2 3 28 28 H 1.08999 * 109.47305 * 59.99866 * 5 3 2 29 29 H 1.09009 * 109.46823 * 300.00083 * 5 3 2 30 30 H 1.09002 * 113.61460 * 25.42051 * 8 6 5 31 31 H 1.09007 * 113.66792 * 254.47622 * 8 6 5 32 32 H 0.96999 * 119.99824 * 74.13780 * 11 9 8 33 33 H 1.08002 * 126.45179 * 359.97418 * 15 14 12 34 34 H 1.08998 * 109.47267 * 355.06605 * 19 18 16 35 35 H 0.96696 * 113.99553 * 179.97438 * 20 19 18 36 36 H 1.48496 * 109.99935 * 303.80618 * 21 19 18 37 37 H 1.48501 * 109.99867 * 65.12728 * 21 19 18 38 38 H 1.08998 * 109.47013 * 95.55756 * 23 22 18 39 39 H 1.09002 * 109.46830 * 215.55870 * 23 22 18 40 40 H 1.09003 * 109.46520 * 335.55488 * 23 22 18 41 41 H 1.09004 * 113.61315 * 105.38826 * 24 6 5 42 42 H 1.08996 * 113.61512 * 334.48484 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2748 -0.0006 6 6 4.0002 2.7420 0.0002 7 1 3.4248 3.3539 -0.6944 8 6 4.1153 3.3537 1.4083 9 6 5.3815 4.0680 0.9072 10 1 5.1852 5.0426 0.4604 11 7 6.4651 4.1018 1.8926 12 6 6.7551 5.2498 2.5362 13 8 6.0585 6.2337 2.3693 14 6 7.9102 5.3136 3.4378 15 6 8.7244 4.2596 3.7947 16 6 9.6974 4.7670 4.6620 17 35 11.0928 3.7793 5.4703 18 6 9.4607 6.0915 4.8226 19 6 10.2711 7.0294 5.6798 20 8 9.4099 7.6881 6.6107 21 14 11.1023 8.2979 4.5979 22 7 8.3790 6.4364 4.0812 23 6 7.8044 7.7805 3.9819 24 6 5.5209 2.9348 -0.1230 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3634 0.5138 0.8900 28 1 3.9557 0.7809 -0.8908 29 1 3.9564 0.7804 0.8892 30 1 4.3088 2.6183 2.1893 31 1 3.3004 4.0333 1.6581 32 1 6.9738 3.2979 2.0817 33 1 8.6309 3.2358 3.4638 34 1 11.0278 6.4631 6.2228 35 1 9.8650 8.3082 7.1967 36 1 11.9294 7.6220 3.5662 37 1 10.0813 9.1578 3.9471 38 1 8.2021 8.2813 3.0992 39 1 6.7200 7.7068 3.9003 40 1 8.0638 8.3531 4.8724 41 1 5.8393 3.2768 -1.1079 42 1 6.0995 2.0847 0.2384 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_5000100.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:27:35 Heat of formation + Delta-G solvation = -71.889882 kcal Electronic energy + Delta-G solvation = -27251.377097 eV Core-core repulsion = 23053.458989 eV Total energy + Delta-G solvation = -4197.918108 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.056 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.96194 -41.70484 -40.86757 -39.33901 -37.77159 -37.51567 -35.31375 -34.38039 -32.48458 -31.50050 -30.96721 -28.49304 -27.52001 -27.17230 -26.73175 -24.55453 -23.12512 -21.98562 -21.55419 -20.84971 -20.26369 -18.93458 -18.56830 -18.54364 -17.89906 -17.58273 -17.35603 -17.09471 -16.79280 -16.21319 -16.04009 -15.73243 -15.47078 -14.85706 -14.82596 -14.51127 -14.47802 -14.37569 -14.26260 -13.94427 -13.88379 -13.52880 -13.42248 -13.32714 -12.95222 -12.86127 -12.82262 -12.23013 -12.12296 -11.99831 -11.90198 -11.83224 -11.51556 -11.41198 -11.34249 -11.14733 -10.68086 -10.23651 -9.91242 -9.37511 -5.14049 0.02777 0.51963 0.87380 1.16812 1.23732 1.36840 1.53950 1.76689 1.85934 2.03035 2.18860 3.07424 3.38568 3.43026 3.47285 3.57365 3.66553 3.74028 3.78461 3.88509 3.97505 4.03193 4.23004 4.23962 4.25649 4.27015 4.36352 4.45278 4.45756 4.57944 4.61222 4.67471 4.72193 4.76231 4.83376 4.97046 5.06202 5.16684 5.19380 5.39207 5.48152 5.53590 5.69637 6.33789 6.70313 6.75142 6.97251 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.454 3.546 4 O -0.545 6.545 5 C -0.096 4.096 6 C -0.096 4.096 7 H 0.087 0.913 8 C -0.148 4.148 9 C 0.119 3.881 10 H 0.093 0.907 11 N -0.688 5.688 12 C 0.588 3.412 13 O -0.580 6.580 14 C -0.056 4.056 15 C -0.099 4.099 16 C -0.179 4.179 17 Br -0.007 7.007 18 C 0.078 3.922 19 C -0.059 4.059 20 O -0.558 6.558 21 Si 0.776 3.224 22 N -0.401 5.401 23 C 0.061 3.939 24 C -0.115 4.115 25 H 0.059 0.941 26 H 0.128 0.872 27 H 0.057 0.943 28 H 0.137 0.863 29 H 0.133 0.867 30 H 0.101 0.899 31 H 0.047 0.953 32 H 0.420 0.580 33 H 0.188 0.812 34 H 0.110 0.890 35 H 0.411 0.589 36 H -0.295 1.295 37 H -0.276 1.276 38 H 0.074 0.926 39 H 0.094 0.906 40 H 0.112 0.888 41 H 0.089 0.911 42 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.171 -3.513 0.888 6.314 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C 0.299 3.701 4 O -0.435 6.435 5 C -0.133 4.133 6 C -0.115 4.115 7 H 0.105 0.895 8 C -0.187 4.187 9 C 0.014 3.986 10 H 0.111 0.889 11 N -0.339 5.339 12 C 0.376 3.624 13 O -0.461 6.461 14 C -0.170 4.170 15 C -0.126 4.126 16 C -0.265 4.265 17 Br 0.077 6.923 18 C -0.043 4.043 19 C -0.169 4.169 20 O -0.369 6.369 21 Si 0.678 3.322 22 N -0.074 5.074 23 C -0.079 4.079 24 C -0.153 4.153 25 H 0.077 0.923 26 H 0.146 0.854 27 H 0.076 0.924 28 H 0.155 0.845 29 H 0.151 0.849 30 H 0.120 0.880 31 H 0.066 0.934 32 H 0.258 0.742 33 H 0.205 0.795 34 H 0.127 0.873 35 H 0.264 0.736 36 H -0.222 1.222 37 H -0.202 1.202 38 H 0.093 0.907 39 H 0.113 0.887 40 H 0.130 0.870 41 H 0.108 0.892 42 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 4.423 -2.589 -0.094 5.126 hybrid contribution -1.104 -0.195 -0.065 1.123 sum 3.319 -2.783 -0.160 4.335 Atomic orbital electron populations 1.23470 0.75396 1.05454 1.02186 1.86511 1.24523 1.33485 1.83808 1.24613 0.93713 0.80793 0.71005 1.90684 1.68400 1.37552 1.46854 1.21542 0.84901 0.98365 1.08489 1.22164 0.97114 0.94586 0.97659 0.89474 1.23618 0.97183 1.00075 0.97780 1.22552 0.86334 0.99963 0.89743 0.88926 1.45511 1.36281 1.11286 1.40843 1.17055 0.82243 0.83856 0.79241 1.90810 1.52416 1.37135 1.65763 1.20259 1.02157 0.87547 1.07019 1.21582 0.93242 0.99313 0.98463 1.20992 1.02482 0.93312 1.09676 1.96661 1.43897 1.71371 1.80390 1.20124 0.91060 0.94154 0.98969 1.24518 0.94935 1.00320 0.97091 1.86409 1.37347 1.61910 1.51214 0.94761 0.78974 0.78283 0.80160 1.43958 1.21599 1.09037 1.32816 1.22528 1.01254 0.79672 1.04454 1.23372 0.94696 0.97857 0.99394 0.92258 0.85381 0.92419 0.84498 0.84907 0.88036 0.93445 0.74177 0.79494 0.87273 0.73578 1.22179 1.20245 0.90732 0.88731 0.86955 0.89197 0.85909 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.18 16 2 O -0.37 -0.81 10.57 -51.39 -0.54 -1.35 16 3 C 0.45 1.34 7.96 71.24 0.57 1.91 16 4 O -0.54 -5.84 15.51 21.99 0.34 -5.50 16 5 C -0.10 0.58 5.65 29.85 0.17 0.75 16 6 C -0.10 0.32 3.15 -10.21 -0.03 0.28 16 7 H 0.09 0.11 7.68 -2.39 -0.02 0.09 16 8 C -0.15 0.00 7.45 31.18 0.23 0.24 16 9 C 0.12 -0.06 4.18 45.52 0.19 0.13 16 10 H 0.09 0.45 7.57 -2.39 -0.02 0.43 16 11 N -0.69 0.48 5.35 -444.01 -2.37 -1.89 16 12 C 0.59 4.32 7.77 86.45 0.67 4.99 16 13 O -0.58 -8.59 14.43 -4.35 -0.06 -8.65 16 14 C -0.06 -0.36 6.89 40.35 0.28 -0.09 16 15 C -0.10 -0.24 10.34 22.58 0.23 0.00 16 16 C -0.18 -0.84 6.53 22.03 0.14 -0.70 16 17 Br -0.01 -0.01 33.06 -20.37 -0.67 -0.69 16 18 C 0.08 0.44 5.14 41.35 0.21 0.65 16 19 C -0.06 0.03 2.78 71.24 0.20 0.23 16 20 O -0.56 1.16 11.32 -148.98 -1.69 -0.53 16 21 Si 0.78 -1.73 31.36 68.60 2.15 0.43 16 22 N -0.40 -3.13 3.12 -519.58 -1.62 -4.75 16 23 C 0.06 0.40 8.66 127.77 1.11 1.51 16 24 C -0.12 0.88 7.39 31.12 0.23 1.11 16 25 H 0.06 0.02 8.13 -2.39 -0.02 0.00 16 26 H 0.13 -0.80 8.14 -2.39 -0.02 -0.82 16 27 H 0.06 0.03 8.13 -2.39 -0.02 0.02 16 28 H 0.14 -1.48 8.14 -2.39 -0.02 -1.50 16 29 H 0.13 -1.39 7.86 -2.38 -0.02 -1.41 16 30 H 0.10 -0.32 7.91 -2.39 -0.02 -0.33 16 31 H 0.05 0.30 8.14 -2.38 -0.02 0.28 16 32 H 0.42 -3.14 7.61 -92.71 -0.71 -3.85 16 33 H 0.19 -0.97 7.45 -2.91 -0.02 -0.99 16 34 H 0.11 -0.35 6.96 -2.39 -0.02 -0.37 16 35 H 0.41 -5.34 8.74 -74.06 -0.65 -5.99 16 36 H -0.29 -1.56 7.11 99.48 0.71 -0.85 16 37 H -0.28 -0.72 6.20 99.48 0.62 -0.11 16 38 H 0.07 0.48 7.76 -2.39 -0.02 0.46 16 39 H 0.09 0.87 6.54 -2.39 -0.02 0.86 16 40 H 0.11 0.39 5.77 -2.39 -0.01 0.38 16 41 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 42 H 0.12 -1.61 8.07 -2.39 -0.02 -1.63 16 Total: 0.00 -27.43 371.18 0.60 -26.83 By element: Atomic # 1 Polarization: -15.75 SS G_CDS: -0.33 Total: -16.07 kcal Atomic # 6 Polarization: 6.78 SS G_CDS: 5.40 Total: 12.18 kcal Atomic # 7 Polarization: -2.64 SS G_CDS: -4.00 Total: -6.64 kcal Atomic # 8 Polarization: -14.08 SS G_CDS: -1.95 Total: -16.03 kcal Atomic # 14 Polarization: -1.73 SS G_CDS: 2.15 Total: 0.43 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -0.67 Total: -0.69 kcal Total: -27.43 0.60 -26.83 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_5000100.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.061 kcal (2) G-P(sol) polarization free energy of solvation -27.431 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.492 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.602 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.829 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.890 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds