Wall clock time and date at job start Sun Mar 7 2021 14:27:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34227 * 116.99901 * 2 1 4 4 O 1.20825 * 119.99979 * 0.02562 * 3 2 1 5 5 C 1.50705 * 119.99999 * 179.97438 * 3 2 1 6 6 C 1.52991 * 109.47362 * 180.02562 * 5 3 2 7 7 H 1.09003 * 112.84801 * 316.19724 * 6 5 3 8 8 C 1.53781 * 113.61611 * 87.50329 * 6 5 3 9 9 C 1.54049 * 87.08031 * 139.97702 * 8 6 5 10 10 H 1.09000 * 113.61076 * 89.06984 * 9 8 6 11 11 N 1.46494 * 113.69866 * 220.05561 * 9 8 6 12 12 C 1.34779 * 119.99525 * 252.42298 * 11 9 8 13 13 O 1.21281 * 120.00328 * 359.97438 * 12 11 9 14 14 C 1.50706 * 119.99749 * 179.97438 * 12 11 9 15 15 O 1.42898 * 109.47423 * 179.97438 * 14 12 11 16 16 C 1.35991 * 117.00433 * 180.02562 * 15 14 12 17 17 C 1.39153 * 120.07299 * 179.97438 * 16 15 14 18 18 O 1.35992 * 120.07522 * 359.97438 * 17 16 15 19 19 C 1.42894 * 116.99903 * 179.97438 * 18 17 16 20 20 C 1.38567 * 119.85108 * 179.97438 * 17 16 15 21 21 C 1.38242 * 119.99884 * 0.02562 * 20 17 16 22 22 C 1.50702 * 119.92604 * 179.97438 * 21 20 17 23 23 O 1.42898 * 109.47522 * 64.99504 * 22 21 20 24 24 Si 1.86298 * 109.47254 * 184.99813 * 22 21 20 25 25 C 1.38250 * 120.14838 * 0.02562 * 21 20 17 26 26 C 1.38247 * 120.14613 * 359.67859 * 25 21 20 27 27 C 1.53781 * 113.61529 * 185.00135 * 6 5 3 28 28 H 1.09001 * 109.46907 * 299.99926 * 1 2 3 29 29 H 1.09004 * 109.46698 * 59.99856 * 1 2 3 30 30 H 1.08998 * 109.47124 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.46526 * 59.99964 * 5 3 2 32 32 H 1.09002 * 109.46938 * 300.00563 * 5 3 2 33 33 H 1.09005 * 113.61471 * 254.53285 * 8 6 5 34 34 H 1.08996 * 113.61178 * 25.34627 * 8 6 5 35 35 H 0.97000 * 120.00537 * 72.42383 * 11 9 8 36 36 H 1.09001 * 109.46833 * 300.00001 * 14 12 11 37 37 H 1.09005 * 109.47003 * 59.99764 * 14 12 11 38 38 H 1.08995 * 109.47729 * 300.00299 * 19 18 17 39 39 H 1.09008 * 109.47003 * 60.00312 * 19 18 17 40 40 H 1.09002 * 109.47138 * 179.97438 * 19 18 17 41 41 H 1.07994 * 119.99992 * 179.97438 * 20 17 16 42 42 H 1.09004 * 109.46924 * 304.99747 * 22 21 20 43 43 H 0.96701 * 114.00005 * 60.00007 * 23 22 21 44 44 H 1.48504 * 109.99874 * 58.67941 * 24 22 21 45 45 H 1.48504 * 109.99900 * 179.97438 * 24 22 21 46 46 H 1.08004 * 119.92455 * 179.97438 * 25 21 20 47 47 H 1.07994 * 119.99915 * 180.30415 * 26 25 21 48 48 H 1.09002 * 113.61445 * 334.56787 * 27 6 5 49 49 H 1.09002 * 113.61408 * 105.38518 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5664 1.2749 0.0006 6 6 4.0002 2.7420 0.0011 7 1 3.4253 3.3536 -0.6943 8 6 4.1155 3.3498 1.4090 9 6 5.3835 4.0680 0.9094 10 1 5.1860 5.0425 0.4628 11 7 6.4680 4.1009 1.8936 12 6 6.7797 5.2558 2.5145 13 8 6.1626 6.2679 2.2580 14 6 7.8950 5.2896 3.5275 15 8 8.0321 6.6161 4.0411 16 6 9.0016 6.8204 4.9725 17 6 9.1913 8.0877 5.5151 18 8 8.4077 9.1247 5.1148 19 6 8.6589 10.3969 5.7151 20 6 10.1802 8.2907 6.4642 21 6 10.9762 7.2355 6.8696 22 6 12.0516 7.4583 7.9015 23 8 11.4499 7.8180 9.1467 24 14 13.0384 5.8929 8.1179 25 6 10.7884 5.9768 6.3297 26 6 9.7995 5.7661 5.3868 27 6 5.5210 2.9348 -0.1211 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 3.9564 0.7806 -0.8891 32 1 3.9558 0.7808 0.8908 33 1 3.2997 4.0279 1.6600 34 1 4.3081 2.6126 2.1884 35 1 6.9618 3.2915 2.0985 36 1 7.6648 4.6054 4.3442 37 1 8.8275 4.9865 3.0514 38 1 8.5195 10.3237 6.7936 39 1 9.6828 10.7038 5.5011 40 1 7.9665 11.1337 5.3080 41 1 10.3297 9.2732 6.8866 42 1 12.7112 8.2609 7.5715 43 1 10.8488 7.1485 9.5011 44 1 13.6433 5.4908 6.8227 45 1 14.1027 6.0997 9.1327 46 1 11.4126 5.1551 6.6487 47 1 9.6518 4.7808 4.9703 48 1 6.0993 2.0842 0.2398 49 1 5.8401 3.2763 -1.1058 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_60476.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:27:39 Heat of formation + Delta-G solvation = -163.373383 kcal Electronic energy + Delta-G solvation = -32001.533902 eV Core-core repulsion = 27283.764542 eV Total energy + Delta-G solvation = -4717.769360 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -41.83727 -41.63134 -40.96529 -39.81630 -38.99236 -38.75029 -37.39817 -36.91446 -34.87370 -32.16303 -31.72514 -31.40815 -29.57550 -28.47646 -28.30221 -26.83689 -26.23141 -24.69643 -23.44208 -22.54114 -21.92498 -21.61125 -20.63397 -19.76069 -18.64354 -18.51016 -18.27592 -17.91203 -17.77784 -17.55721 -17.47772 -17.13446 -16.85834 -16.59133 -16.22335 -16.10626 -15.86899 -15.65013 -15.46463 -15.37628 -14.85639 -14.72259 -14.49298 -14.25935 -13.92722 -13.74623 -13.67842 -13.62518 -13.50195 -13.44940 -13.00271 -12.88199 -12.63216 -12.51394 -12.23169 -12.16937 -12.10806 -11.98193 -11.94871 -11.77247 -11.75756 -11.49244 -11.37211 -10.81926 -10.46897 -10.11811 -9.79050 -8.84934 -5.07160 0.17531 0.29766 1.22701 1.26000 1.45380 1.51340 1.60536 1.72787 1.94479 2.32545 2.55604 2.57130 3.30064 3.33023 3.41708 3.46805 3.62517 3.64123 3.68303 3.76963 3.79509 3.82787 3.93229 3.93616 4.12508 4.16213 4.17014 4.22552 4.25850 4.27304 4.29723 4.34157 4.38899 4.48549 4.52545 4.56524 4.59056 4.65879 4.66344 4.72696 4.89263 4.99779 5.01168 5.09526 5.16857 5.36898 5.40646 5.46756 5.55766 5.97383 6.34872 6.54158 6.55596 6.75836 7.13190 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.100 4.100 7 H 0.108 0.892 8 C -0.147 4.147 9 C 0.125 3.875 10 H 0.119 0.881 11 N -0.718 5.718 12 C 0.516 3.484 13 O -0.508 6.508 14 C 0.038 3.962 15 O -0.277 6.277 16 C 0.104 3.896 17 C 0.107 3.893 18 O -0.301 6.301 19 C 0.025 3.975 20 C -0.146 4.146 21 C -0.116 4.116 22 C -0.066 4.066 23 O -0.540 6.540 24 Si 0.689 3.311 25 C -0.112 4.112 26 C -0.170 4.170 27 C -0.139 4.139 28 H 0.064 0.936 29 H 0.064 0.936 30 H 0.102 0.898 31 H 0.110 0.890 32 H 0.108 0.892 33 H 0.078 0.922 34 H 0.086 0.914 35 H 0.402 0.598 36 H 0.095 0.905 37 H 0.094 0.906 38 H 0.057 0.943 39 H 0.055 0.945 40 H 0.103 0.897 41 H 0.140 0.860 42 H 0.113 0.887 43 H 0.379 0.621 44 H -0.257 1.257 45 H -0.255 1.255 46 H 0.132 0.868 47 H 0.140 0.860 48 H 0.091 0.909 49 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.934 -8.160 0.612 8.409 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.280 6.280 3 C 0.300 3.700 4 O -0.390 6.390 5 C -0.139 4.139 6 C -0.119 4.119 7 H 0.126 0.874 8 C -0.186 4.186 9 C 0.021 3.979 10 H 0.137 0.863 11 N -0.372 5.372 12 C 0.300 3.700 13 O -0.381 6.381 14 C -0.041 4.041 15 O -0.189 6.189 16 C 0.058 3.942 17 C 0.061 3.939 18 O -0.215 6.215 19 C -0.070 4.070 20 C -0.165 4.165 21 C -0.116 4.116 22 C -0.177 4.177 23 O -0.346 6.346 24 Si 0.591 3.409 25 C -0.130 4.130 26 C -0.188 4.188 27 C -0.177 4.177 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.121 0.879 31 H 0.128 0.872 32 H 0.126 0.874 33 H 0.097 0.903 34 H 0.105 0.895 35 H 0.237 0.763 36 H 0.113 0.887 37 H 0.112 0.888 38 H 0.076 0.924 39 H 0.074 0.926 40 H 0.121 0.879 41 H 0.158 0.842 42 H 0.130 0.870 43 H 0.227 0.773 44 H -0.182 1.182 45 H -0.180 1.180 46 H 0.150 0.850 47 H 0.157 0.843 48 H 0.110 0.890 49 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 2.104 -6.774 0.058 7.094 hybrid contribution 0.123 0.079 -0.033 0.150 sum 2.227 -6.695 0.025 7.056 Atomic orbital electron populations 1.23303 0.75925 1.03930 1.02726 1.86503 1.23805 1.33547 1.84096 1.23820 0.92310 0.81399 0.72433 1.90702 1.67227 1.36308 1.44742 1.21401 0.87623 0.98838 1.06085 1.22247 0.96153 0.94204 0.99250 0.87375 1.23619 0.98360 1.00177 0.96420 1.22557 0.86237 1.00047 0.89093 0.86277 1.45788 1.37257 1.11053 1.43059 1.20072 0.84237 0.83862 0.81792 1.90803 1.51497 1.33168 1.62609 1.22499 0.98914 0.85294 0.97380 1.86283 1.50911 1.28178 1.53535 1.18282 0.91519 0.91786 0.92564 1.18287 0.93196 0.86496 0.95908 1.86250 1.55188 1.16778 1.63238 1.23133 1.02404 0.82928 0.98563 1.20939 0.96443 1.00689 0.98432 1.20035 0.98820 0.93307 0.99475 1.25038 0.98008 1.10696 0.83944 1.86504 1.64781 1.48182 1.35102 0.94758 0.82218 0.81924 0.82040 1.20662 0.98463 0.96084 0.97811 1.20990 0.98167 0.98076 1.01601 1.23431 0.95748 0.98436 1.00089 0.91764 0.91760 0.87916 0.87172 0.87422 0.90304 0.89535 0.76314 0.88736 0.88815 0.92417 0.92633 0.87851 0.84230 0.86988 0.77325 1.18189 1.17981 0.85035 0.84269 0.89023 0.89976 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.30 10.57 -39.25 -0.41 -0.72 16 3 C 0.46 0.45 7.96 36.01 0.29 0.74 16 4 O -0.50 -2.12 15.51 -18.75 -0.29 -2.42 16 5 C -0.10 0.28 5.65 -27.89 -0.16 0.12 16 6 C -0.10 0.20 3.15 -89.81 -0.28 -0.08 16 7 H 0.11 -0.04 7.68 -51.93 -0.40 -0.44 16 8 C -0.15 0.16 7.44 -25.78 -0.19 -0.04 16 9 C 0.13 -0.14 4.25 -66.98 -0.28 -0.43 16 10 H 0.12 0.15 7.47 -51.93 -0.39 -0.24 16 11 N -0.72 1.44 5.36 -52.88 -0.28 1.15 16 12 C 0.52 0.84 7.91 -10.98 -0.09 0.75 16 13 O -0.51 -3.62 16.10 -14.35 -0.23 -3.85 16 14 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 15 O -0.28 -1.10 9.45 -47.34 -0.45 -1.54 16 16 C 0.10 0.28 6.70 -39.12 -0.26 0.02 16 17 C 0.11 0.37 6.70 -39.12 -0.26 0.11 16 18 O -0.30 -1.38 10.28 -34.22 -0.35 -1.73 16 19 C 0.02 0.01 9.81 101.05 0.99 1.00 16 20 C -0.15 -0.24 8.67 -39.46 -0.34 -0.58 16 21 C -0.12 -0.04 5.35 -104.62 -0.56 -0.60 16 22 C -0.07 0.02 2.80 36.01 0.10 0.12 16 23 O -0.54 -0.06 12.83 -35.23 -0.45 -0.51 16 24 Si 0.69 -1.01 29.79 -169.99 -5.06 -6.07 16 25 C -0.11 0.09 8.66 -39.57 -0.34 -0.25 16 26 C -0.17 0.08 9.04 -39.46 -0.36 -0.28 16 27 C -0.14 0.50 7.39 -25.92 -0.19 0.31 16 28 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 31 H 0.11 -0.49 8.14 -51.93 -0.42 -0.91 16 32 H 0.11 -0.48 7.84 -51.93 -0.41 -0.89 16 33 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 34 H 0.09 -0.20 7.89 -51.93 -0.41 -0.61 16 35 H 0.40 -2.26 8.73 -40.82 -0.36 -2.61 16 36 H 0.09 -0.35 7.65 -51.93 -0.40 -0.75 16 37 H 0.09 -0.34 7.67 -51.93 -0.40 -0.74 16 38 H 0.06 -0.03 7.66 -51.93 -0.40 -0.43 16 39 H 0.06 -0.03 7.66 -51.92 -0.40 -0.43 16 40 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 41 H 0.14 0.09 6.30 -52.49 -0.33 -0.24 16 42 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 43 H 0.38 -1.41 8.70 45.56 0.40 -1.01 16 44 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 45 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 46 H 0.13 -0.43 4.89 -52.48 -0.26 -0.68 16 47 H 0.14 -0.52 6.30 -52.49 -0.33 -0.85 16 48 H 0.09 -0.50 8.08 -51.93 -0.42 -0.92 16 49 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 LS Contribution 410.83 15.07 6.19 6.19 Total: 0.00 -13.52 410.83 -9.09 -22.61 By element: Atomic # 1 Polarization: -8.17 SS G_CDS: -7.06 Total: -15.23 kcal Atomic # 6 Polarization: 2.81 SS G_CDS: -0.69 Total: 2.12 kcal Atomic # 7 Polarization: 1.44 SS G_CDS: -0.28 Total: 1.15 kcal Atomic # 8 Polarization: -8.58 SS G_CDS: -2.19 Total: -10.77 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.06 Total: -6.07 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -13.52 -9.09 -22.61 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_60476.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.762 kcal (2) G-P(sol) polarization free energy of solvation -13.518 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.279 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.094 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.612 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.373 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds