Wall clock time and date at job start Sun Mar 7 2021 14:27:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34227 * 116.99901 * 2 1 4 4 O 1.20825 * 119.99979 * 0.02562 * 3 2 1 5 5 C 1.50705 * 119.99999 * 179.97438 * 3 2 1 6 6 C 1.52991 * 109.47362 * 180.02562 * 5 3 2 7 7 H 1.09003 * 112.84801 * 316.19724 * 6 5 3 8 8 C 1.53781 * 113.61611 * 87.50329 * 6 5 3 9 9 C 1.54049 * 87.08031 * 139.97702 * 8 6 5 10 10 H 1.09000 * 113.61076 * 89.06984 * 9 8 6 11 11 N 1.46494 * 113.69866 * 220.05561 * 9 8 6 12 12 C 1.34779 * 119.99525 * 252.42298 * 11 9 8 13 13 O 1.21281 * 120.00328 * 359.97438 * 12 11 9 14 14 C 1.50706 * 119.99749 * 179.97438 * 12 11 9 15 15 O 1.42898 * 109.47423 * 179.97438 * 14 12 11 16 16 C 1.35991 * 117.00433 * 180.02562 * 15 14 12 17 17 C 1.39153 * 120.07299 * 179.97438 * 16 15 14 18 18 O 1.35992 * 120.07522 * 359.97438 * 17 16 15 19 19 C 1.42894 * 116.99903 * 179.97438 * 18 17 16 20 20 C 1.38567 * 119.85108 * 179.97438 * 17 16 15 21 21 C 1.38242 * 119.99884 * 0.02562 * 20 17 16 22 22 C 1.50702 * 119.92604 * 179.97438 * 21 20 17 23 23 O 1.42898 * 109.47522 * 64.99504 * 22 21 20 24 24 Si 1.86298 * 109.47254 * 184.99813 * 22 21 20 25 25 C 1.38250 * 120.14838 * 0.02562 * 21 20 17 26 26 C 1.38247 * 120.14613 * 359.67859 * 25 21 20 27 27 C 1.53781 * 113.61529 * 185.00135 * 6 5 3 28 28 H 1.09001 * 109.46907 * 299.99926 * 1 2 3 29 29 H 1.09004 * 109.46698 * 59.99856 * 1 2 3 30 30 H 1.08998 * 109.47124 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.46526 * 59.99964 * 5 3 2 32 32 H 1.09002 * 109.46938 * 300.00563 * 5 3 2 33 33 H 1.09005 * 113.61471 * 254.53285 * 8 6 5 34 34 H 1.08996 * 113.61178 * 25.34627 * 8 6 5 35 35 H 0.97000 * 120.00537 * 72.42383 * 11 9 8 36 36 H 1.09001 * 109.46833 * 300.00001 * 14 12 11 37 37 H 1.09005 * 109.47003 * 59.99764 * 14 12 11 38 38 H 1.08995 * 109.47729 * 300.00299 * 19 18 17 39 39 H 1.09008 * 109.47003 * 60.00312 * 19 18 17 40 40 H 1.09002 * 109.47138 * 179.97438 * 19 18 17 41 41 H 1.07994 * 119.99992 * 179.97438 * 20 17 16 42 42 H 1.09004 * 109.46924 * 304.99747 * 22 21 20 43 43 H 0.96701 * 114.00005 * 60.00007 * 23 22 21 44 44 H 1.48504 * 109.99874 * 58.67941 * 24 22 21 45 45 H 1.48504 * 109.99900 * 179.97438 * 24 22 21 46 46 H 1.08004 * 119.92455 * 179.97438 * 25 21 20 47 47 H 1.07994 * 119.99915 * 180.30415 * 26 25 21 48 48 H 1.09002 * 113.61445 * 334.56787 * 27 6 5 49 49 H 1.09002 * 113.61408 * 105.38518 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5664 1.2749 0.0006 6 6 4.0002 2.7420 0.0011 7 1 3.4253 3.3536 -0.6943 8 6 4.1155 3.3498 1.4090 9 6 5.3835 4.0680 0.9094 10 1 5.1860 5.0425 0.4628 11 7 6.4680 4.1009 1.8936 12 6 6.7797 5.2558 2.5145 13 8 6.1626 6.2679 2.2580 14 6 7.8950 5.2896 3.5275 15 8 8.0321 6.6161 4.0411 16 6 9.0016 6.8204 4.9725 17 6 9.1913 8.0877 5.5151 18 8 8.4077 9.1247 5.1148 19 6 8.6589 10.3969 5.7151 20 6 10.1802 8.2907 6.4642 21 6 10.9762 7.2355 6.8696 22 6 12.0516 7.4583 7.9015 23 8 11.4499 7.8180 9.1467 24 14 13.0384 5.8929 8.1179 25 6 10.7884 5.9768 6.3297 26 6 9.7995 5.7661 5.3868 27 6 5.5210 2.9348 -0.1211 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 3.9564 0.7806 -0.8891 32 1 3.9558 0.7808 0.8908 33 1 3.2997 4.0279 1.6600 34 1 4.3081 2.6126 2.1884 35 1 6.9618 3.2915 2.0985 36 1 7.6648 4.6054 4.3442 37 1 8.8275 4.9865 3.0514 38 1 8.5195 10.3237 6.7936 39 1 9.6828 10.7038 5.5011 40 1 7.9665 11.1337 5.3080 41 1 10.3297 9.2732 6.8866 42 1 12.7112 8.2609 7.5715 43 1 10.8488 7.1485 9.5011 44 1 13.6433 5.4908 6.8227 45 1 14.1027 6.0997 9.1327 46 1 11.4126 5.1551 6.6487 47 1 9.6518 4.7808 4.9703 48 1 6.0993 2.0842 0.2398 49 1 5.8401 3.2763 -1.1058 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_60476.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:27:38 Heat of formation + Delta-G solvation = -167.988759 kcal Electronic energy + Delta-G solvation = -32001.734039 eV Core-core repulsion = 27283.764542 eV Total energy + Delta-G solvation = -4717.969498 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -41.85997 -41.65379 -41.01546 -39.82157 -39.07602 -38.78416 -37.48957 -36.91042 -34.91550 -32.13931 -31.66479 -31.39889 -29.53262 -28.49985 -28.25399 -26.67400 -26.21306 -24.64358 -23.44519 -22.56594 -21.91976 -21.61906 -20.51002 -19.78092 -18.66315 -18.52466 -18.30370 -17.90937 -17.78548 -17.57321 -17.48633 -17.17877 -16.83081 -16.67004 -16.15648 -16.09298 -15.84108 -15.65964 -15.49308 -15.37104 -14.81280 -14.70640 -14.47950 -14.29840 -13.93245 -13.77121 -13.60560 -13.48272 -13.43838 -13.34434 -12.92230 -12.80008 -12.63258 -12.54541 -12.18536 -12.13640 -12.11029 -11.97171 -11.86154 -11.80647 -11.74746 -11.47260 -11.32111 -10.93981 -10.42620 -10.09902 -9.79150 -8.91455 -4.96169 0.16855 0.28111 1.19339 1.34418 1.45653 1.51072 1.68777 1.80613 2.01398 2.30386 2.56411 2.61184 3.44418 3.48787 3.49998 3.56200 3.70689 3.78052 3.81936 3.87007 3.91610 3.92977 4.05448 4.13828 4.14741 4.26327 4.27992 4.28191 4.28624 4.32111 4.35575 4.49344 4.49833 4.63366 4.64522 4.65256 4.69791 4.76538 4.81032 4.88248 5.00826 5.02888 5.11235 5.12652 5.25423 5.37404 5.42359 5.57559 5.61090 5.97410 6.44288 6.56302 6.72877 6.78387 7.18494 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.453 3.547 4 O -0.546 6.546 5 C -0.094 4.094 6 C -0.100 4.100 7 H 0.082 0.918 8 C -0.147 4.147 9 C 0.115 3.885 10 H 0.084 0.916 11 N -0.695 5.695 12 C 0.509 3.491 13 O -0.578 6.578 14 C 0.035 3.965 15 O -0.317 6.317 16 C 0.084 3.916 17 C 0.075 3.925 18 O -0.336 6.336 19 C 0.021 3.979 20 C -0.154 4.154 21 C -0.120 4.120 22 C -0.078 4.078 23 O -0.558 6.558 24 Si 0.789 3.211 25 C -0.108 4.108 26 C -0.158 4.158 27 C -0.114 4.114 28 H 0.057 0.943 29 H 0.057 0.943 30 H 0.128 0.872 31 H 0.136 0.864 32 H 0.137 0.863 33 H 0.042 0.958 34 H 0.108 0.892 35 H 0.425 0.575 36 H 0.131 0.869 37 H 0.129 0.871 38 H 0.064 0.936 39 H 0.062 0.938 40 H 0.110 0.890 41 H 0.139 0.861 42 H 0.102 0.898 43 H 0.395 0.605 44 H -0.279 1.279 45 H -0.303 1.303 46 H 0.163 0.837 47 H 0.179 0.821 48 H 0.127 0.873 49 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.894 -11.935 1.007 12.594 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C 0.298 3.702 4 O -0.436 6.436 5 C -0.131 4.131 6 C -0.119 4.119 7 H 0.100 0.900 8 C -0.186 4.186 9 C 0.010 3.990 10 H 0.102 0.898 11 N -0.349 5.349 12 C 0.296 3.704 13 O -0.457 6.457 14 C -0.043 4.043 15 O -0.230 6.230 16 C 0.039 3.961 17 C 0.029 3.971 18 O -0.250 6.250 19 C -0.074 4.074 20 C -0.172 4.172 21 C -0.121 4.121 22 C -0.187 4.187 23 O -0.366 6.366 24 Si 0.694 3.306 25 C -0.125 4.125 26 C -0.176 4.176 27 C -0.151 4.151 28 H 0.076 0.924 29 H 0.076 0.924 30 H 0.147 0.853 31 H 0.154 0.846 32 H 0.154 0.846 33 H 0.061 0.939 34 H 0.126 0.874 35 H 0.264 0.736 36 H 0.149 0.851 37 H 0.147 0.853 38 H 0.083 0.917 39 H 0.081 0.919 40 H 0.129 0.871 41 H 0.156 0.844 42 H 0.120 0.880 43 H 0.245 0.755 44 H -0.206 1.206 45 H -0.232 1.232 46 H 0.180 0.820 47 H 0.196 0.804 48 H 0.146 0.854 49 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 4.056 -10.617 0.453 11.374 hybrid contribution -0.504 1.259 -0.126 1.362 sum 3.552 -9.358 0.327 10.014 Atomic orbital electron populations 1.23468 0.75438 1.05453 1.02154 1.86509 1.24483 1.33491 1.83816 1.24672 0.93808 0.80761 0.70979 1.90692 1.68443 1.37627 1.46883 1.21543 0.84726 0.98274 1.08580 1.22141 0.97336 0.94609 0.97799 0.89992 1.23647 0.97111 1.00078 0.97780 1.22485 0.86826 0.99488 0.90249 0.89828 1.45611 1.36508 1.11046 1.41691 1.20704 0.84217 0.83627 0.81867 1.90778 1.54125 1.35764 1.65036 1.22814 0.99274 0.84271 0.97943 1.86227 1.51710 1.30892 1.54202 1.18610 0.92179 0.92382 0.92940 1.18695 0.94153 0.86912 0.97310 1.86188 1.56344 1.18096 1.64400 1.23272 1.03082 0.82057 0.98949 1.21010 0.96546 1.01310 0.98377 1.20209 0.98619 0.93649 0.99603 1.25295 0.98008 1.11660 0.83710 1.86468 1.65361 1.49533 1.35240 0.93668 0.79266 0.79519 0.78132 1.21019 0.98284 0.96234 0.96958 1.21410 0.96732 0.98777 1.00710 1.23358 0.94485 0.97988 0.99310 0.92398 0.92374 0.85344 0.84579 0.84561 0.93911 0.87386 0.73600 0.85127 0.85330 0.91705 0.91906 0.87142 0.84357 0.88024 0.75452 1.20568 1.23193 0.82049 0.80361 0.85443 0.89701 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.49 10.57 -51.38 -0.54 -1.03 16 3 C 0.45 0.98 7.96 71.24 0.57 1.55 16 4 O -0.55 -5.67 15.51 21.97 0.34 -5.33 16 5 C -0.09 0.69 5.65 29.85 0.17 0.85 16 6 C -0.10 0.40 3.15 -10.27 -0.03 0.37 16 7 H 0.08 0.12 7.68 -2.39 -0.02 0.10 16 8 C -0.15 0.21 7.44 31.21 0.23 0.44 16 9 C 0.11 -0.19 4.25 45.61 0.19 0.00 16 10 H 0.08 0.49 7.47 -2.39 -0.02 0.47 16 11 N -0.69 3.41 5.36 -439.60 -2.36 1.05 16 12 C 0.51 1.94 7.91 87.66 0.69 2.63 16 13 O -0.58 -10.11 16.10 16.00 0.26 -9.85 16 14 C 0.03 -0.10 5.22 71.24 0.37 0.27 16 15 O -0.32 -2.80 9.45 -67.04 -0.63 -3.43 16 16 C 0.08 0.47 6.70 22.57 0.15 0.63 16 17 C 0.07 0.64 6.70 22.57 0.15 0.79 16 18 O -0.34 -4.06 10.28 -79.60 -0.82 -4.88 16 19 C 0.02 0.07 9.81 113.37 1.11 1.18 16 20 C -0.15 -0.67 8.67 22.35 0.19 -0.48 16 21 C -0.12 -0.02 5.35 -19.86 -0.11 -0.13 16 22 C -0.08 0.09 2.80 71.24 0.20 0.29 16 23 O -0.56 0.01 12.83 -148.98 -1.91 -1.90 16 24 Si 0.79 -3.48 29.79 68.60 2.04 -1.43 16 25 C -0.11 0.42 8.66 22.27 0.19 0.61 16 26 C -0.16 0.50 9.04 22.35 0.20 0.71 16 27 C -0.11 1.02 7.39 31.12 0.23 1.25 16 28 H 0.06 0.00 8.13 -2.39 -0.02 -0.02 16 29 H 0.06 -0.01 8.13 -2.39 -0.02 -0.02 16 30 H 0.13 -0.90 8.14 -2.39 -0.02 -0.92 16 31 H 0.14 -1.62 8.14 -2.39 -0.02 -1.64 16 32 H 0.14 -1.71 7.84 -2.39 -0.02 -1.73 16 33 H 0.04 0.25 8.14 -2.38 -0.02 0.23 16 34 H 0.11 -0.65 7.89 -2.39 -0.02 -0.67 16 35 H 0.42 -6.11 8.73 -92.71 -0.81 -6.92 16 36 H 0.13 -1.38 7.65 -2.39 -0.02 -1.40 16 37 H 0.13 -1.32 7.67 -2.38 -0.02 -1.34 16 38 H 0.06 0.08 7.66 -2.39 -0.02 0.06 16 39 H 0.06 0.07 7.66 -2.38 -0.02 0.05 16 40 H 0.11 0.10 8.14 -2.39 -0.02 0.08 16 41 H 0.14 0.45 6.30 -2.91 -0.02 0.43 16 42 H 0.10 0.06 7.96 -2.38 -0.02 0.04 16 43 H 0.40 -3.25 8.70 -74.06 -0.64 -3.90 16 44 H -0.28 0.16 7.11 99.48 0.71 0.87 16 45 H -0.30 -1.15 7.11 99.48 0.71 -0.44 16 46 H 0.16 -1.67 4.89 -2.91 -0.01 -1.68 16 47 H 0.18 -2.14 6.30 -2.91 -0.02 -2.16 16 48 H 0.13 -1.99 8.08 -2.39 -0.02 -2.01 16 49 H 0.08 -0.72 8.14 -2.39 -0.02 -0.74 16 Total: 0.00 -39.61 410.83 1.69 -37.92 By element: Atomic # 1 Polarization: -22.85 SS G_CDS: -0.41 Total: -23.26 kcal Atomic # 6 Polarization: 6.42 SS G_CDS: 5.72 Total: 12.14 kcal Atomic # 7 Polarization: 3.41 SS G_CDS: -2.36 Total: 1.05 kcal Atomic # 8 Polarization: -23.11 SS G_CDS: -3.31 Total: -26.42 kcal Atomic # 14 Polarization: -3.48 SS G_CDS: 2.04 Total: -1.43 kcal Total: -39.61 1.69 -37.92 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_60476.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -130.064 kcal (2) G-P(sol) polarization free energy of solvation -39.610 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -169.674 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.685 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.925 kcal (6) G-S(sol) free energy of system = (1) + (5) -167.989 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds