Wall clock time and date at job start Sun Mar 7 2021 14:27:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34230 * 116.99768 * 2 1 4 4 O 1.20829 * 120.00083 * 359.97438 * 3 2 1 5 5 C 1.50705 * 120.00273 * 179.97438 * 3 2 1 6 6 C 1.52995 * 109.47412 * 180.02562 * 5 3 2 7 7 H 1.09002 * 112.85043 * 314.66553 * 6 5 3 8 8 C 1.53785 * 113.69093 * 85.93670 * 6 5 3 9 9 C 1.53779 * 87.08093 * 139.99088 * 8 6 5 10 10 H 1.09003 * 113.61186 * 89.11185 * 9 8 6 11 11 N 1.46496 * 113.61356 * 220.01890 * 9 8 6 12 12 C 1.34777 * 119.99720 * 252.49922 * 11 9 8 13 13 O 1.21285 * 120.00463 * 359.97438 * 12 11 9 14 14 C 1.50702 * 119.99875 * 180.02562 * 12 11 9 15 15 O 1.42899 * 109.47182 * 179.97438 * 14 12 11 16 16 C 1.35915 * 117.00287 * 179.97438 * 15 14 12 17 17 C 1.38791 * 120.06370 * 180.02562 * 16 15 14 18 18 Br 1.89102 * 120.03278 * 0.02562 * 17 16 15 19 19 C 1.38232 * 119.93181 * 179.97438 * 17 16 15 20 20 C 1.38249 * 120.04498 * 0.02562 * 19 17 16 21 21 C 1.50697 * 119.93883 * 179.97438 * 20 19 17 22 22 O 1.42903 * 109.46943 * 65.00863 * 21 20 19 23 23 Si 1.86307 * 109.46840 * 184.99797 * 21 20 19 24 24 C 1.38282 * 120.11524 * 0.02562 * 20 19 17 25 25 C 1.38142 * 120.07371 * 359.68049 * 24 20 19 26 26 C 1.53781 * 113.61293 * 183.47294 * 6 5 3 27 27 H 1.08996 * 109.47069 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.47450 * 299.99814 * 1 2 3 29 29 H 1.09007 * 109.46745 * 59.99961 * 1 2 3 30 30 H 1.09005 * 109.46730 * 59.99835 * 5 3 2 31 31 H 1.09004 * 109.46839 * 300.00696 * 5 3 2 32 32 H 1.09003 * 113.60734 * 254.54208 * 8 6 5 33 33 H 1.08996 * 113.61146 * 25.43706 * 8 6 5 34 34 H 0.96999 * 120.00578 * 72.49698 * 11 9 8 35 35 H 1.09004 * 109.46988 * 299.99297 * 14 12 11 36 36 H 1.08992 * 109.47264 * 59.99929 * 14 12 11 37 37 H 1.08000 * 119.98069 * 179.97438 * 19 17 16 38 38 H 1.09000 * 109.47784 * 305.00091 * 21 20 19 39 39 H 0.96690 * 114.00668 * 59.98853 * 22 21 20 40 40 H 1.48494 * 109.99717 * 58.68638 * 23 21 20 41 41 H 1.48497 * 109.99886 * 180.02562 * 23 21 20 42 42 H 1.08001 * 119.96156 * 179.97438 * 24 20 19 43 43 H 1.07998 * 120.02297 * 180.29819 * 25 24 20 44 44 H 1.09005 * 113.61302 * 334.47929 * 26 6 5 45 45 H 1.08996 * 113.61527 * 105.30092 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 6 4.0000 2.7422 0.0011 7 1 3.4432 3.3485 -0.7134 8 6 4.0790 3.3627 1.4060 9 6 5.3571 4.0755 0.9336 10 1 5.1712 5.0463 0.4740 11 7 6.4144 4.1173 1.9468 12 6 6.7082 5.2774 2.5667 13 8 6.0977 6.2869 2.2854 14 6 7.7961 5.3205 3.6086 15 8 7.9180 6.6511 4.1152 16 6 8.8611 6.8637 5.0706 17 6 9.0334 8.1319 5.6075 18 35 7.9557 9.5667 5.0109 19 6 9.9930 8.3449 6.5794 20 6 10.7807 7.2960 7.0161 21 6 11.8264 7.5311 8.0753 22 8 11.1893 7.8993 9.3003 23 14 12.8114 5.9707 8.3326 24 6 10.6113 6.0319 6.4818 25 6 9.6497 5.8123 5.5146 26 6 5.5235 2.9342 -0.0836 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3634 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8901 30 1 3.9564 0.7807 -0.8892 31 1 3.9557 0.7810 0.8908 32 1 3.2570 4.0427 1.6297 33 1 4.2528 2.6327 2.1965 34 1 6.9029 3.3100 2.1717 35 1 7.5451 4.6424 4.4243 36 1 8.7412 5.0150 3.1599 37 1 10.1281 9.3316 6.9974 38 1 12.4926 8.3329 7.7568 39 1 10.5805 7.2311 9.6435 40 1 13.4532 5.5594 7.0582 41 1 13.8458 6.1891 9.3754 42 1 11.2283 5.2144 6.8244 43 1 9.5148 4.8237 5.1013 44 1 6.0923 2.0871 0.2998 45 1 5.8678 3.2669 -1.0628 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_6201210.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:27:41 Heat of formation + Delta-G solvation = -128.105826 kcal Electronic energy + Delta-G solvation = -29639.480983 eV Core-core repulsion = 25057.642748 eV Total energy + Delta-G solvation = -4581.838236 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.060 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -41.79928 -41.56545 -40.88036 -39.65761 -38.87318 -37.49239 -37.19476 -34.91003 -33.60231 -32.00342 -31.67273 -30.49563 -29.55872 -28.30455 -26.67705 -26.36863 -24.73887 -23.74856 -22.43180 -21.93969 -21.61430 -20.50531 -19.57020 -18.65555 -18.43439 -18.08046 -17.82374 -17.57100 -17.46170 -17.15972 -16.87502 -16.38635 -16.16780 -15.94320 -15.67046 -15.60956 -15.12763 -14.83768 -14.70571 -14.49071 -14.42120 -14.03775 -13.81508 -13.78030 -13.64894 -13.45122 -13.34192 -12.92314 -12.81005 -12.36265 -12.17969 -12.14491 -12.11292 -11.90386 -11.85940 -11.83618 -11.80244 -11.47361 -11.31907 -11.23786 -10.93662 -10.41822 -10.09467 -9.97381 -9.31879 -4.97154 -0.05023 0.12256 0.64189 1.19313 1.34600 1.44440 1.46711 1.68032 1.80180 2.03217 2.40185 2.55176 3.44539 3.47529 3.49670 3.52663 3.67037 3.76503 3.78161 3.81818 3.86326 3.92198 4.04643 4.12329 4.12695 4.26172 4.27859 4.31507 4.33958 4.48842 4.51302 4.64504 4.65137 4.69722 4.76473 4.81138 4.85407 4.88590 5.00707 5.03200 5.11743 5.24125 5.25625 5.42357 5.48779 5.59381 6.08289 6.50680 6.72862 6.80070 7.19062 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.452 3.548 4 O -0.546 6.546 5 C -0.094 4.094 6 C -0.100 4.100 7 H 0.081 0.919 8 C -0.147 4.147 9 C 0.116 3.884 10 H 0.084 0.916 11 N -0.695 5.695 12 C 0.509 3.491 13 O -0.575 6.575 14 C 0.032 3.968 15 O -0.308 6.308 16 C 0.148 3.852 17 C -0.146 4.146 18 Br -0.058 7.058 19 C -0.037 4.037 20 C -0.153 4.153 21 C -0.077 4.077 22 O -0.559 6.559 23 Si 0.790 3.210 24 C -0.052 4.052 25 C -0.188 4.188 26 C -0.114 4.114 27 H 0.128 0.872 28 H 0.057 0.943 29 H 0.057 0.943 30 H 0.136 0.864 31 H 0.137 0.863 32 H 0.041 0.959 33 H 0.107 0.893 34 H 0.425 0.575 35 H 0.135 0.865 36 H 0.133 0.867 37 H 0.134 0.866 38 H 0.103 0.897 39 H 0.396 0.604 40 H -0.275 1.275 41 H -0.305 1.305 42 H 0.169 0.831 43 H 0.183 0.817 44 H 0.127 0.873 45 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.300 -14.714 0.645 15.343 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C 0.298 3.702 4 O -0.436 6.436 5 C -0.131 4.131 6 C -0.119 4.119 7 H 0.099 0.901 8 C -0.186 4.186 9 C 0.011 3.989 10 H 0.102 0.898 11 N -0.349 5.349 12 C 0.295 3.705 13 O -0.453 6.453 14 C -0.045 4.045 15 O -0.220 6.220 16 C 0.100 3.900 17 C -0.226 4.226 18 Br 0.028 6.972 19 C -0.057 4.057 20 C -0.155 4.155 21 C -0.186 4.186 22 O -0.367 6.367 23 Si 0.695 3.305 24 C -0.070 4.070 25 C -0.206 4.206 26 C -0.152 4.152 27 H 0.146 0.854 28 H 0.076 0.924 29 H 0.076 0.924 30 H 0.154 0.846 31 H 0.155 0.845 32 H 0.060 0.940 33 H 0.126 0.874 34 H 0.264 0.736 35 H 0.153 0.847 36 H 0.151 0.849 37 H 0.151 0.849 38 H 0.120 0.880 39 H 0.246 0.754 40 H -0.202 1.202 41 H -0.233 1.233 42 H 0.186 0.814 43 H 0.201 0.799 44 H 0.146 0.854 45 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 4.211 -12.868 0.000 13.539 hybrid contribution -0.431 0.875 -0.158 0.988 sum 3.780 -11.993 -0.158 12.575 Atomic orbital electron populations 1.23464 0.75452 1.05446 1.02147 1.86509 1.24470 1.33509 1.83821 1.24683 0.93818 0.80758 0.70990 1.90695 1.68450 1.37620 1.46864 1.21543 0.84699 0.98309 1.08567 1.22145 0.97379 0.94527 0.97878 0.90060 1.23592 0.97140 1.00036 0.97834 1.22423 0.87280 0.99437 0.89735 0.89793 1.45614 1.38267 1.10914 1.40134 1.20656 0.83879 0.83660 0.82287 1.90797 1.53377 1.35939 1.65163 1.22899 1.00033 0.83642 0.97924 1.86255 1.52772 1.31157 1.51822 1.18825 0.89274 0.93037 0.88832 1.21283 1.03787 0.91989 1.05523 1.96762 1.67976 1.43132 1.89368 1.20872 0.91882 1.00424 0.92510 1.20380 1.00183 0.93869 1.01068 1.25305 0.97819 1.11688 0.83799 1.86488 1.63655 1.49246 1.37285 0.93797 0.79563 0.79154 0.77985 1.21268 0.95847 0.96007 0.93845 1.21596 0.98089 0.99405 1.01550 1.23358 0.94419 0.97921 0.99458 0.85357 0.92390 0.92397 0.84637 0.84538 0.93955 0.87438 0.73617 0.84716 0.84903 0.84861 0.87957 0.75409 1.20197 1.23345 0.81397 0.79946 0.85449 0.89706 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.15 16 2 O -0.37 -0.36 10.57 -51.41 -0.54 -0.90 16 3 C 0.45 0.78 7.96 71.24 0.57 1.35 16 4 O -0.55 -5.44 15.54 21.95 0.34 -5.10 16 5 C -0.09 0.74 5.64 29.85 0.17 0.91 16 6 C -0.10 0.48 3.11 -10.27 -0.03 0.44 16 7 H 0.08 0.06 7.73 -2.39 -0.02 0.04 16 8 C -0.15 0.33 7.43 31.12 0.23 0.56 16 9 C 0.12 -0.34 4.24 45.52 0.19 -0.14 16 10 H 0.08 0.39 7.47 -2.39 -0.02 0.37 16 11 N -0.70 4.63 5.35 -440.03 -2.36 2.28 16 12 C 0.51 0.67 7.91 87.66 0.69 1.37 16 13 O -0.57 -8.53 16.10 15.99 0.26 -8.27 16 14 C 0.03 -0.19 5.22 71.24 0.37 0.18 16 15 O -0.31 -1.41 9.00 -73.56 -0.66 -2.07 16 16 C 0.15 0.30 6.68 22.52 0.15 0.45 16 17 C -0.15 -0.87 6.24 22.40 0.14 -0.73 16 18 Br -0.06 -0.60 33.16 -20.37 -0.68 -1.28 16 19 C -0.04 -0.12 9.42 22.27 0.21 0.09 16 20 C -0.15 0.29 5.35 -19.85 -0.11 0.19 16 21 C -0.08 0.19 2.80 71.23 0.20 0.39 16 22 O -0.56 0.43 12.83 -148.98 -1.91 -1.48 16 23 Si 0.79 -4.76 29.80 68.60 2.04 -2.71 16 24 C -0.05 0.36 8.66 22.26 0.19 0.55 16 25 C -0.19 1.22 9.04 22.36 0.20 1.42 16 26 C -0.11 1.12 7.39 31.12 0.23 1.35 16 27 H 0.13 -0.93 8.14 -2.39 -0.02 -0.95 16 28 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 29 H 0.06 -0.02 8.13 -2.38 -0.02 -0.04 16 30 H 0.14 -1.67 8.14 -2.38 -0.02 -1.69 16 31 H 0.14 -1.80 7.88 -2.39 -0.02 -1.82 16 32 H 0.04 0.22 8.14 -2.39 -0.02 0.20 16 33 H 0.11 -0.73 7.92 -2.39 -0.02 -0.75 16 34 H 0.42 -6.82 8.73 -92.71 -0.81 -7.63 16 35 H 0.14 -1.85 7.65 -2.39 -0.02 -1.87 16 36 H 0.13 -1.79 7.67 -2.39 -0.02 -1.81 16 37 H 0.13 0.53 8.06 -2.91 -0.02 0.51 16 38 H 0.10 -0.05 7.96 -2.39 -0.02 -0.06 16 39 H 0.40 -3.66 8.70 -74.06 -0.64 -4.31 16 40 H -0.28 0.73 7.11 99.48 0.71 1.44 16 41 H -0.30 -0.86 7.11 99.48 0.71 -0.15 16 42 H 0.17 -2.28 4.90 -2.91 -0.01 -2.29 16 43 H 0.18 -2.82 6.30 -2.91 -0.02 -2.84 16 44 H 0.13 -2.11 8.08 -2.38 -0.02 -2.13 16 45 H 0.08 -0.79 8.14 -2.39 -0.02 -0.81 16 Total: 0.00 -37.36 402.09 0.74 -36.62 By element: Atomic # 1 Polarization: -26.25 SS G_CDS: -0.36 Total: -26.61 kcal Atomic # 6 Polarization: 4.92 SS G_CDS: 4.61 Total: 9.53 kcal Atomic # 7 Polarization: 4.63 SS G_CDS: -2.36 Total: 2.28 kcal Atomic # 8 Polarization: -15.30 SS G_CDS: -2.52 Total: -17.82 kcal Atomic # 14 Polarization: -4.76 SS G_CDS: 2.04 Total: -2.71 kcal Atomic # 35 Polarization: -0.60 SS G_CDS: -0.68 Total: -1.28 kcal Total: -37.36 0.74 -36.62 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_6201210.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.487 kcal (2) G-P(sol) polarization free energy of solvation -37.359 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.846 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.740 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.619 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.106 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds