Wall clock time and date at job start Sun Mar 7 2021 14:27:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34221 * 117.00242 * 2 1 4 4 O 1.20825 * 120.00171 * 359.97438 * 3 2 1 5 5 C 1.50707 * 120.00063 * 180.02562 * 3 2 1 6 6 C 1.52995 * 109.46824 * 179.97438 * 5 3 2 7 7 H 1.08997 * 112.91150 * 43.74817 * 6 5 3 8 8 C 1.53791 * 113.60994 * 174.99865 * 6 5 3 9 9 C 1.53786 * 87.07966 * 139.97886 * 8 6 5 10 10 H 1.08998 * 113.60870 * 89.19954 * 9 8 6 11 11 N 1.46499 * 113.61394 * 220.01815 * 9 8 6 12 12 C 1.34777 * 119.99665 * 205.27970 * 11 9 8 13 13 O 1.21283 * 119.99990 * 359.71991 * 12 11 9 14 14 C 1.50698 * 119.99538 * 179.72653 * 12 11 9 15 15 N 1.46899 * 109.46987 * 179.97438 * 14 12 11 16 16 C 1.46905 * 111.00532 * 66.04197 * 15 14 12 17 17 C 1.39669 * 111.00261 * 189.99766 * 15 14 12 18 18 C 1.38893 * 120.07575 * 119.99606 * 17 15 14 19 19 C 1.50697 * 120.03724 * 359.95454 * 18 17 15 20 20 O 1.42901 * 109.46791 * 75.00366 * 19 18 17 21 21 Si 1.86307 * 109.47113 * 194.99861 * 19 18 17 22 22 C 1.38131 * 119.92718 * 179.97438 * 18 17 15 23 23 C 1.38263 * 120.07191 * 0.02562 * 22 18 17 24 24 C 1.50702 * 119.92535 * 179.97438 * 23 22 18 25 25 F 1.39900 * 109.46780 * 90.00249 * 24 23 22 26 26 F 1.39898 * 109.47120 * 209.99971 * 24 23 22 27 27 F 1.39897 * 109.47160 * 330.00178 * 24 23 22 28 28 C 1.38309 * 120.15237 * 359.97438 * 23 22 18 29 29 C 1.38084 * 120.07258 * 359.73609 * 28 23 22 30 30 C 1.53778 * 87.08287 * 334.56878 * 9 8 6 31 31 H 1.09000 * 109.47047 * 300.00118 * 1 2 3 32 32 H 1.09000 * 109.46774 * 59.99894 * 1 2 3 33 33 H 1.08999 * 109.47438 * 179.97438 * 1 2 3 34 34 H 1.09000 * 109.46957 * 59.99824 * 5 3 2 35 35 H 1.09005 * 109.46736 * 299.99738 * 5 3 2 36 36 H 1.08999 * 113.61698 * 25.43239 * 8 6 5 37 37 H 1.09001 * 113.60977 * 254.52695 * 8 6 5 38 38 H 0.97001 * 119.99790 * 24.99683 * 11 9 8 39 39 H 1.09003 * 109.47112 * 299.99065 * 14 12 11 40 40 H 1.08993 * 109.47916 * 59.99687 * 14 12 11 41 41 H 1.08998 * 109.46586 * 60.00128 * 16 15 14 42 42 H 1.08997 * 109.47601 * 180.02562 * 16 15 14 43 43 H 1.08998 * 109.46729 * 300.00335 * 16 15 14 44 44 H 1.08998 * 109.47613 * 315.00161 * 19 18 17 45 45 H 0.96697 * 114.00240 * 299.99866 * 20 19 18 46 46 H 1.48500 * 110.00178 * 298.68321 * 21 19 18 47 47 H 1.48497 * 109.99765 * 60.00461 * 21 19 18 48 48 H 1.07999 * 119.96586 * 179.97438 * 22 18 17 49 49 H 1.07998 * 119.96478 * 180.02562 * 28 23 22 50 50 H 1.07998 * 120.03803 * 180.27258 * 29 28 23 51 51 H 1.08997 * 113.61721 * 139.97826 * 30 9 8 52 52 H 1.09004 * 113.61436 * 270.88721 * 30 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2747 -0.0006 6 6 4.0002 2.7419 -0.0011 7 1 3.4253 3.3546 0.6932 8 6 5.5211 2.9346 0.1211 9 6 5.3813 4.0667 -0.9103 10 1 5.1854 5.0418 -0.4644 11 7 6.4644 4.0992 -1.8963 12 6 6.7781 5.2549 -2.5147 13 8 6.1605 6.2668 -2.2586 14 6 7.8963 5.2897 -3.5244 15 7 8.0382 6.6537 -4.0510 16 6 8.4859 7.5793 -3.0017 17 6 8.9059 6.6801 -5.1451 18 6 8.4537 7.1226 -6.3816 19 6 7.0253 7.5742 -6.5449 20 8 6.8631 8.8645 -5.9525 21 14 6.6066 7.6663 -8.3580 22 6 9.3146 7.1480 -7.4615 23 6 10.6251 6.7329 -7.3127 24 6 11.5614 6.7614 -8.4932 25 9 12.2059 8.0019 -8.5474 26 9 12.5144 5.7463 -8.3572 27 9 10.8330 6.5625 -9.6710 28 6 11.0787 6.2916 -6.0829 29 6 10.2250 6.2694 -4.9978 30 6 4.1156 3.3497 -1.4090 31 1 -0.3633 0.5139 0.8900 32 1 -0.3633 0.5139 -0.8900 33 1 -0.3634 -1.0276 -0.0005 34 1 3.9558 0.7807 -0.8908 35 1 3.9565 0.7804 0.8892 36 1 6.0994 2.0841 -0.2398 37 1 5.8400 3.2776 1.1054 38 1 6.9583 3.2899 -2.1010 39 1 8.8274 4.9859 -3.0460 40 1 7.6685 4.6066 -4.3426 41 1 9.4511 7.2515 -2.6158 42 1 8.5823 8.5818 -3.4185 43 1 7.7559 7.5913 -2.1923 44 1 6.3609 6.8630 -6.0542 45 1 7.0645 8.8914 -5.0072 46 1 7.4842 8.6562 -9.0324 47 1 6.7714 6.3306 -8.9857 48 1 8.9636 7.4916 -8.4233 49 1 12.1030 5.9685 -5.9700 50 1 10.5810 5.9289 -4.0367 51 1 3.2999 4.0277 -1.6600 52 1 4.3096 2.6126 -2.1882 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_6406254.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:27:45 Heat of formation + Delta-G solvation = -226.997907 kcal Electronic energy + Delta-G solvation = -40411.632506 eV Core-core repulsion = 34543.605488 eV Total energy + Delta-G solvation = -5868.027018 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.164 amu Computer time = 1.63 seconds Orbital eigenvalues (eV) -51.37803 -48.90321 -48.84010 -41.89955 -41.63206 -40.86153 -39.51728 -37.71405 -37.60040 -37.42420 -34.78408 -33.11488 -32.27802 -31.62459 -29.47088 -28.31014 -27.70922 -27.00094 -26.65728 -25.39046 -24.38574 -23.40361 -22.21724 -21.76671 -21.49892 -20.43912 -19.72882 -19.67645 -19.57289 -18.62185 -18.48484 -18.18228 -17.92009 -17.57510 -17.54506 -17.01369 -16.99865 -16.45850 -16.31798 -16.06623 -15.84399 -15.73654 -15.72669 -15.48549 -15.27232 -15.11455 -15.01804 -14.99653 -14.96023 -14.80070 -14.67912 -14.46641 -14.13131 -13.99045 -13.89848 -13.72008 -13.44176 -13.35125 -13.31922 -13.10120 -12.92018 -12.87388 -12.75386 -12.55558 -12.31271 -12.11193 -11.84720 -11.80163 -11.45569 -11.44881 -11.29398 -11.08890 -10.83976 -10.36145 -10.19709 -9.99975 -9.67781 -4.89965 -0.48989 -0.12064 1.18934 1.29833 1.42599 1.55562 1.61786 1.77148 1.85875 1.95762 2.07187 2.48213 2.68964 2.78279 3.18290 3.40741 3.46389 3.46997 3.51892 3.65878 3.79822 3.80985 3.85470 3.92170 3.95474 3.97013 4.05218 4.14505 4.25740 4.26512 4.28194 4.33814 4.34766 4.41802 4.46752 4.49291 4.54503 4.64494 4.69778 4.77745 4.80191 4.83624 4.85161 4.89219 4.96903 5.04508 5.08704 5.12922 5.27057 5.32407 5.43421 5.54843 5.65404 6.02461 6.58437 6.60484 6.72495 7.30680 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.368 6.368 3 C 0.453 3.547 4 O -0.545 6.545 5 C -0.096 4.096 6 C -0.100 4.100 7 H 0.083 0.917 8 C -0.117 4.117 9 C 0.121 3.879 10 H 0.089 0.911 11 N -0.706 5.706 12 C 0.513 3.487 13 O -0.562 6.562 14 C 0.039 3.961 15 N -0.504 5.504 16 C 0.022 3.978 17 C 0.136 3.864 18 C -0.099 4.099 19 C -0.071 4.071 20 O -0.545 6.545 21 Si 0.787 3.213 22 C -0.084 4.084 23 C -0.187 4.187 24 C 0.507 3.493 25 F -0.181 7.181 26 F -0.172 7.172 27 F -0.185 7.185 28 C -0.052 4.052 29 C -0.133 4.133 30 C -0.147 4.147 31 H 0.058 0.942 32 H 0.058 0.942 33 H 0.128 0.872 34 H 0.133 0.867 35 H 0.134 0.866 36 H 0.120 0.880 37 H 0.084 0.916 38 H 0.418 0.582 39 H 0.103 0.897 40 H 0.121 0.879 41 H 0.050 0.950 42 H 0.070 0.930 43 H 0.084 0.916 44 H 0.089 0.911 45 H 0.372 0.628 46 H -0.288 1.288 47 H -0.260 1.260 48 H 0.125 0.875 49 H 0.161 0.839 50 H 0.168 0.832 51 H 0.044 0.956 52 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.133 -9.202 5.271 10.817 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.284 6.284 3 C 0.298 3.702 4 O -0.434 6.434 5 C -0.133 4.133 6 C -0.119 4.119 7 H 0.102 0.898 8 C -0.155 4.155 9 C 0.016 3.984 10 H 0.108 0.892 11 N -0.359 5.359 12 C 0.300 3.700 13 O -0.440 6.440 14 C -0.090 4.090 15 N -0.226 5.226 16 C -0.123 4.123 17 C 0.042 3.958 18 C -0.100 4.100 19 C -0.180 4.180 20 O -0.351 6.351 21 Si 0.689 3.311 22 C -0.102 4.102 23 C -0.189 4.189 24 C 0.453 3.547 25 F -0.162 7.162 26 F -0.153 7.153 27 F -0.166 7.166 28 C -0.070 4.070 29 C -0.153 4.153 30 C -0.186 4.186 31 H 0.077 0.923 32 H 0.076 0.924 33 H 0.146 0.854 34 H 0.151 0.849 35 H 0.152 0.848 36 H 0.139 0.861 37 H 0.103 0.897 38 H 0.256 0.744 39 H 0.121 0.879 40 H 0.139 0.861 41 H 0.068 0.932 42 H 0.089 0.911 43 H 0.102 0.898 44 H 0.107 0.893 45 H 0.221 0.779 46 H -0.215 1.215 47 H -0.185 1.185 48 H 0.143 0.857 49 H 0.179 0.821 50 H 0.185 0.815 51 H 0.063 0.937 52 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 1.127 -7.988 3.889 8.955 hybrid contribution 1.545 -0.441 0.903 1.843 sum 2.672 -8.428 4.793 10.057 Atomic orbital electron populations 1.23468 0.75398 1.05438 1.02204 1.86508 1.24527 1.33555 1.83821 1.24645 0.93760 0.80776 0.71021 1.90688 1.68403 1.37540 1.46818 1.21548 0.84813 0.98577 1.08319 1.22161 0.97361 0.94370 0.98023 0.89842 1.23355 0.94378 0.98241 0.99533 1.22344 0.86717 0.99328 0.89997 0.89239 1.45816 1.36501 1.11621 1.41964 1.20753 0.84464 0.83338 0.81454 1.90716 1.53670 1.34924 1.64647 1.22177 0.98158 0.90243 0.98468 1.59147 1.47731 1.08282 1.07441 1.22652 1.00032 0.95700 0.93958 1.18823 0.90489 0.95515 0.90977 1.20318 0.97101 1.00278 0.92350 1.25202 0.92306 0.88233 1.12283 1.86673 1.91382 1.28669 1.28423 0.92375 0.89662 0.78545 0.70543 1.20782 0.92497 0.97801 0.99124 1.19980 0.94374 1.09887 0.94628 1.18394 0.79623 0.73774 0.82895 1.93235 1.82950 1.43352 1.96673 1.93204 1.66127 1.60220 1.95765 1.93188 1.77472 1.94830 1.51151 1.21140 1.01625 0.94409 0.89836 1.21970 0.92730 1.00327 1.00267 1.23571 0.97551 1.00072 0.97429 0.92292 0.92359 0.85418 0.84928 0.84777 0.86135 0.89722 0.74401 0.87896 0.86070 0.93190 0.91118 0.89755 0.89306 0.77870 1.21543 1.18526 0.85733 0.82114 0.81486 0.93713 0.88074 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.15 16 2 O -0.37 -0.42 10.56 -51.33 -0.54 -0.96 16 3 C 0.45 0.79 7.96 71.24 0.57 1.36 16 4 O -0.54 -5.20 15.51 21.97 0.34 -4.86 16 5 C -0.10 0.71 5.65 29.85 0.17 0.88 16 6 C -0.10 0.51 3.15 -10.26 -0.03 0.48 16 7 H 0.08 0.00 7.68 -2.39 -0.02 -0.01 16 8 C -0.12 1.19 7.39 31.13 0.23 1.42 16 9 C 0.12 -0.53 4.24 45.52 0.19 -0.34 16 10 H 0.09 0.16 7.46 -2.39 -0.02 0.15 16 11 N -0.71 5.36 5.35 -440.04 -2.36 3.01 16 12 C 0.51 -1.13 7.55 87.66 0.66 -0.47 16 13 O -0.56 -4.18 13.91 -3.04 -0.04 -4.22 16 14 C 0.04 -0.29 5.04 85.56 0.43 0.15 16 15 N -0.50 1.36 3.22 -724.44 -2.33 -0.97 16 16 C 0.02 -0.06 8.62 127.69 1.10 1.04 16 17 C 0.14 -0.24 4.61 38.22 0.18 -0.06 16 18 C -0.10 -0.27 5.28 -19.73 -0.10 -0.37 16 19 C -0.07 -0.23 2.30 71.24 0.16 -0.07 16 20 O -0.54 -3.25 12.65 -148.98 -1.89 -5.13 16 21 Si 0.79 2.09 30.40 68.60 2.09 4.17 16 22 C -0.08 -0.40 8.01 22.25 0.18 -0.22 16 23 C -0.19 -0.51 5.46 -19.84 -0.11 -0.62 16 24 C 0.51 2.52 3.36 71.24 0.24 2.76 16 25 F -0.18 -1.28 17.30 44.97 0.78 -0.50 16 26 F -0.17 -0.65 16.46 44.97 0.74 0.09 16 27 F -0.19 -1.39 16.46 44.97 0.74 -0.65 16 28 C -0.05 0.14 9.39 22.25 0.21 0.35 16 29 C -0.13 0.71 8.70 22.40 0.19 0.91 16 30 C -0.15 0.42 7.43 31.12 0.23 0.65 16 31 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 32 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 33 H 0.13 -0.91 8.14 -2.39 -0.02 -0.93 16 34 H 0.13 -1.61 7.84 -2.39 -0.02 -1.63 16 35 H 0.13 -1.60 8.14 -2.38 -0.02 -1.62 16 36 H 0.12 -1.89 8.08 -2.39 -0.02 -1.91 16 37 H 0.08 -0.84 8.14 -2.39 -0.02 -0.86 16 38 H 0.42 -6.16 8.73 -92.71 -0.81 -6.97 16 39 H 0.10 -1.36 7.49 -2.39 -0.02 -1.37 16 40 H 0.12 -1.18 8.06 -2.39 -0.02 -1.20 16 41 H 0.05 -0.32 7.46 -2.39 -0.02 -0.34 16 42 H 0.07 -0.14 7.53 -2.39 -0.02 -0.16 16 43 H 0.08 0.12 5.88 -2.39 -0.01 0.10 16 44 H 0.09 0.18 7.78 -2.39 -0.02 0.16 16 45 H 0.37 1.28 7.59 -74.06 -0.56 0.72 16 46 H -0.29 -2.52 6.81 99.48 0.68 -1.84 16 47 H -0.26 -1.20 7.11 99.48 0.71 -0.49 16 48 H 0.13 0.84 4.47 -2.91 -0.01 0.83 16 49 H 0.16 -1.09 7.60 -2.91 -0.02 -1.11 16 50 H 0.17 -1.91 7.16 -2.91 -0.02 -1.93 16 51 H 0.04 0.18 8.14 -2.39 -0.02 0.16 16 52 H 0.10 -0.63 7.89 -2.39 -0.02 -0.65 16 Total: 0.00 -24.91 437.97 2.86 -22.04 By element: Atomic # 1 Polarization: -20.65 SS G_CDS: -0.36 Total: -21.01 kcal Atomic # 6 Polarization: 3.30 SS G_CDS: 5.70 Total: 9.00 kcal Atomic # 7 Polarization: 6.72 SS G_CDS: -4.69 Total: 2.04 kcal Atomic # 8 Polarization: -13.05 SS G_CDS: -2.13 Total: -15.18 kcal Atomic # 9 Polarization: -3.32 SS G_CDS: 2.26 Total: -1.06 kcal Atomic # 14 Polarization: 2.09 SS G_CDS: 2.09 Total: 4.17 kcal Total: -24.91 2.86 -22.04 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_6406254.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -204.955 kcal (2) G-P(sol) polarization free energy of solvation -24.907 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -229.863 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.865 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.043 kcal (6) G-S(sol) free energy of system = (1) + (5) -226.998 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.63 seconds