Wall clock time and date at job start Sun Mar 7 2021 14:28:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34230 * 116.99849 * 2 1 4 4 O 1.20832 * 119.99856 * 359.97438 * 3 2 1 5 5 C 1.50694 * 120.00291 * 179.97438 * 3 2 1 6 6 C 1.53006 * 109.47466 * 180.02562 * 5 3 2 7 7 H 1.08999 * 112.84857 * 316.19772 * 6 5 3 8 8 C 1.53953 * 113.74254 * 87.40475 * 6 5 3 9 9 C 1.53775 * 87.02093 * 139.94245 * 8 6 5 10 10 H 1.09009 * 113.60931 * 89.22993 * 9 8 6 11 11 N 1.46496 * 113.61542 * 220.04561 * 9 8 6 12 12 C 1.34782 * 120.00071 * 254.13552 * 11 9 8 13 13 O 1.21595 * 119.99974 * 0.02562 * 12 11 9 14 14 C 1.47518 * 120.00026 * 180.02562 * 12 11 9 15 15 C 1.36592 * 125.77153 * 180.23897 * 14 12 11 16 16 N 1.34813 * 106.84255 * 180.13693 * 15 14 12 17 17 C 1.46501 * 126.59947 * 179.90967 * 16 15 14 18 18 C 1.53001 * 109.47207 * 124.71159 * 17 16 15 19 19 O 1.42900 * 109.46962 * 180.02562 * 18 17 16 20 20 C 1.35926 * 117.00112 * 180.02562 * 19 18 17 21 21 C 1.38814 * 120.05982 * 179.97438 * 20 19 18 22 22 Cl 1.73604 * 120.03907 * 0.02562 * 21 20 19 23 23 C 1.38252 * 119.92141 * 179.74417 * 21 20 19 24 24 C 1.38250 * 120.04370 * 0.55267 * 23 21 20 25 25 C 1.50699 * 119.94218 * 179.72284 * 24 23 21 26 26 O 1.42901 * 109.46830 * 119.72225 * 25 24 23 27 27 Si 1.86298 * 109.46950 * 359.72662 * 25 24 23 28 28 C 1.38278 * 120.11351 * 359.44213 * 24 23 21 29 29 C 1.38146 * 120.08028 * 0.28339 * 28 24 23 30 30 N 1.40208 * 106.80728 * 359.64557 * 16 15 14 31 31 N 1.28759 * 108.37204 * 0.22643 * 30 16 15 32 32 C 1.53780 * 87.17436 * 334.64060 * 9 8 6 33 33 H 1.09003 * 109.46784 * 179.97438 * 1 2 3 34 34 H 1.08997 * 109.47518 * 299.99514 * 1 2 3 35 35 H 1.08995 * 109.46889 * 60.00273 * 1 2 3 36 36 H 1.08999 * 109.47172 * 60.00029 * 5 3 2 37 37 H 1.08998 * 109.47646 * 300.00577 * 5 3 2 38 38 H 1.09000 * 113.61402 * 25.42217 * 8 6 5 39 39 H 1.08999 * 113.66510 * 254.47572 * 8 6 5 40 40 H 0.96998 * 119.99701 * 74.14521 * 11 9 8 41 41 H 1.08003 * 126.58223 * 0.02562 * 15 14 12 42 42 H 1.08996 * 109.46801 * 4.70986 * 17 16 15 43 43 H 1.09000 * 109.47214 * 244.71688 * 17 16 15 44 44 H 1.08994 * 109.46876 * 60.00121 * 18 17 16 45 45 H 1.08997 * 109.46897 * 299.99893 * 18 17 16 46 46 H 1.08003 * 119.98343 * 180.26716 * 23 21 20 47 47 H 1.08991 * 109.47351 * 239.72373 * 25 24 23 48 48 H 0.96708 * 114.00246 * 299.99864 * 26 25 24 49 49 H 1.48506 * 109.99834 * 180.02562 * 27 25 24 50 50 H 1.48502 * 110.00011 * 301.31529 * 27 25 24 51 51 H 1.08006 * 119.95635 * 180.29508 * 28 24 23 52 52 H 1.08001 * 120.02310 * 179.97438 * 29 28 24 53 53 H 1.09003 * 113.61555 * 139.93673 * 32 9 8 54 54 H 1.08994 * 113.61282 * 270.75760 * 32 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5662 1.2750 0.0006 6 6 4.0000 2.7423 0.0011 7 1 3.4251 3.3539 -0.6942 8 6 4.1140 3.3544 1.4091 9 6 5.3807 4.0686 0.9086 10 1 5.1845 5.0431 0.4613 11 7 6.4635 4.1028 1.8948 12 6 6.7529 5.2512 2.5382 13 8 6.1150 6.2587 2.3005 14 6 7.8437 5.2858 3.5308 15 6 8.2328 6.3787 4.2518 16 7 9.2571 5.9855 5.0351 17 6 10.0015 6.8183 5.9830 18 6 9.9615 6.1729 7.3697 19 8 10.6871 6.9856 8.2944 20 6 10.7499 6.5510 9.5807 21 6 11.4389 7.2910 10.5319 22 17 12.2211 8.7735 10.0801 23 6 11.4964 6.8489 11.8406 24 6 10.8783 5.6655 12.1992 25 6 10.9478 5.1826 13.6251 26 8 9.6259 5.0808 14.1584 27 14 11.9364 6.3904 14.6422 28 6 10.1914 4.9271 11.2532 29 6 10.1259 5.3670 9.9453 30 7 9.4690 4.6246 4.7726 31 7 8.6194 4.2459 3.8823 32 6 5.5208 2.9351 -0.1211 33 1 -0.3633 -1.0277 -0.0005 34 1 -0.3634 0.5137 0.8900 35 1 -0.3633 0.5138 -0.8900 36 1 3.9564 0.7807 -0.8891 37 1 3.9557 0.7810 0.8907 38 1 4.3071 2.6194 2.1905 39 1 3.2990 4.0341 1.6580 40 1 6.9722 3.2990 2.0845 41 1 7.8036 7.3686 4.2024 42 1 9.5487 7.8086 6.0299 43 1 11.0366 6.9074 5.6534 44 1 10.4143 5.1826 7.3227 45 1 8.9263 6.0840 7.6992 46 1 12.0286 7.4261 12.5823 47 1 11.4277 4.2045 13.6545 48 1 9.1383 5.9160 14.1634 49 1 12.0129 5.9253 16.0504 50 1 13.3034 6.5294 14.0788 51 1 9.7054 4.0053 11.5372 52 1 9.5896 4.7893 9.2070 53 1 5.8399 3.2767 -1.1058 54 1 6.1004 2.0858 0.2405 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_7143556.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:28:01 Heat of formation + Delta-G solvation = -38.074610 kcal Electronic energy + Delta-G solvation = -39614.931067 eV Core-core repulsion = 33969.446077 eV Total energy + Delta-G solvation = -5645.484990 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 451.143 amu Computer time = 2.19 seconds Orbital eigenvalues (eV) -43.36772 -41.67905 -41.52974 -40.86304 -39.49155 -39.29356 -37.76685 -37.48324 -37.08611 -36.16725 -34.79362 -32.51936 -32.20379 -32.07025 -31.43852 -30.51351 -28.40356 -26.75647 -26.67847 -25.83150 -25.59786 -24.06031 -23.65929 -22.86559 -22.45044 -21.84635 -21.47136 -20.55417 -19.79836 -18.99901 -18.54434 -18.33384 -17.87314 -17.84777 -17.55212 -17.52372 -17.18855 -17.00927 -16.92082 -16.63783 -16.18758 -16.05767 -15.85315 -15.80576 -15.57324 -15.46275 -15.34328 -14.99085 -14.83916 -14.75213 -14.47071 -14.32437 -13.90106 -13.82440 -13.74121 -13.46836 -13.42439 -13.34031 -13.17525 -12.91990 -12.78688 -12.62579 -12.57235 -12.38624 -12.31131 -12.15210 -11.98550 -11.95807 -11.86064 -11.83569 -11.80508 -11.49841 -11.46299 -11.32859 -11.20756 -10.51482 -10.48774 -10.07354 -10.02974 -9.34284 -5.03626 -0.02709 0.00737 0.02636 0.52489 0.71209 1.07181 1.19274 1.27550 1.59432 1.77730 1.93493 1.95394 2.10234 2.15489 2.36985 3.09256 3.20100 3.45414 3.46610 3.46792 3.50242 3.54050 3.66829 3.75365 3.76847 3.80088 3.84587 3.88132 3.92425 3.96356 4.03734 4.06732 4.26232 4.27804 4.28642 4.30575 4.42263 4.43400 4.44711 4.49330 4.59355 4.64378 4.67220 4.69840 4.76170 4.77370 4.83542 4.88105 4.99716 5.03525 5.11302 5.23367 5.26971 5.27302 5.41559 5.42190 5.58708 5.98814 6.37502 6.72850 6.75101 6.79736 7.09091 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.368 6.368 3 C 0.455 3.545 4 O -0.543 6.543 5 C -0.097 4.097 6 C -0.096 4.096 7 H 0.090 0.910 8 C -0.147 4.147 9 C 0.116 3.884 10 H 0.100 0.900 11 N -0.695 5.695 12 C 0.605 3.395 13 O -0.570 6.570 14 C -0.123 4.123 15 C 0.118 3.882 16 N -0.351 5.351 17 C 0.123 3.877 18 C 0.047 3.953 19 O -0.304 6.304 20 C 0.138 3.862 21 C -0.077 4.077 22 Cl -0.057 7.057 23 C -0.073 4.073 24 C -0.142 4.142 25 C -0.061 4.061 26 O -0.552 6.552 27 Si 0.757 3.243 28 C -0.049 4.049 29 C -0.194 4.194 30 N -0.083 5.083 31 N -0.213 5.213 32 C -0.120 4.120 33 H 0.127 0.873 34 H 0.058 0.942 35 H 0.059 0.941 36 H 0.135 0.865 37 H 0.130 0.870 38 H 0.097 0.903 39 H 0.052 0.948 40 H 0.417 0.583 41 H 0.237 0.763 42 H 0.150 0.850 43 H 0.123 0.877 44 H 0.080 0.920 45 H 0.082 0.918 46 H 0.153 0.847 47 H 0.114 0.886 48 H 0.396 0.604 49 H -0.295 1.295 50 H -0.284 1.284 51 H 0.146 0.854 52 H 0.153 0.847 53 H 0.090 0.910 54 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.654 -1.344 0.496 1.575 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.284 6.284 3 C 0.300 3.700 4 O -0.433 6.433 5 C -0.134 4.134 6 C -0.115 4.115 7 H 0.109 0.891 8 C -0.186 4.186 9 C 0.012 3.988 10 H 0.118 0.882 11 N -0.345 5.345 12 C 0.390 3.610 13 O -0.448 6.448 14 C -0.263 4.263 15 C -0.039 4.039 16 N -0.136 5.136 17 C 0.003 3.997 18 C -0.029 4.029 19 O -0.217 6.217 20 C 0.091 3.909 21 C -0.104 4.104 22 Cl -0.028 7.028 23 C -0.091 4.091 24 C -0.143 4.143 25 C -0.171 4.171 26 O -0.360 6.360 27 Si 0.664 3.336 28 C -0.067 4.067 29 C -0.212 4.212 30 N -0.063 5.063 31 N -0.087 5.087 32 C -0.157 4.157 33 H 0.145 0.855 34 H 0.077 0.923 35 H 0.078 0.922 36 H 0.153 0.847 37 H 0.148 0.852 38 H 0.115 0.885 39 H 0.071 0.929 40 H 0.255 0.745 41 H 0.253 0.747 42 H 0.168 0.832 43 H 0.141 0.859 44 H 0.098 0.902 45 H 0.100 0.900 46 H 0.170 0.830 47 H 0.132 0.868 48 H 0.246 0.754 49 H -0.223 1.223 50 H -0.211 1.211 51 H 0.163 0.837 52 H 0.170 0.830 53 H 0.108 0.892 54 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 1.876 -1.739 1.125 2.795 hybrid contribution -0.694 0.185 -0.384 0.815 sum 1.182 -1.554 0.741 2.088 Atomic orbital electron populations 1.23470 0.75364 1.05427 1.02245 1.86512 1.24566 1.33537 1.83829 1.24574 0.93625 0.80805 0.71032 1.90682 1.68331 1.37471 1.46797 1.21537 0.85007 0.98576 1.08288 1.22175 0.96972 0.94451 0.97871 0.89143 1.23601 0.97349 1.00095 0.97561 1.22567 0.86375 1.00062 0.89815 0.88189 1.45734 1.35952 1.12017 1.40756 1.16949 0.80992 0.83654 0.79406 1.90822 1.52664 1.34993 1.66345 1.21477 1.04919 0.91769 1.08089 1.23910 0.87890 1.02203 0.89925 1.50339 1.24083 1.09876 1.29292 1.21922 0.99737 0.93431 0.84595 1.22960 0.97558 0.94878 0.87499 1.85996 1.70869 1.48922 1.15876 1.18678 0.95547 0.93045 0.83596 1.20207 1.04285 0.92237 0.93656 1.98391 1.79144 1.32318 1.92915 1.20912 0.98644 0.95842 0.93740 1.20250 1.01261 0.95432 0.97381 1.24964 0.91376 1.07913 0.92896 1.86483 1.26123 1.39246 1.84191 0.93914 0.78696 0.85392 0.75621 1.21100 0.95071 0.99332 0.91198 1.21456 1.04530 0.96497 0.98761 1.81985 1.19295 0.90143 1.14871 1.74607 1.02072 1.25520 1.06529 1.23360 0.94755 0.98008 0.99618 0.85465 0.92336 0.92201 0.84670 0.85216 0.88500 0.92884 0.74516 0.74711 0.83201 0.85873 0.90199 0.89973 0.82966 0.86818 0.75370 1.22276 1.21136 0.83673 0.82963 0.89177 0.86677 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.18 16 2 O -0.37 -0.87 10.57 -51.42 -0.54 -1.42 16 3 C 0.45 1.39 7.96 71.23 0.57 1.96 16 4 O -0.54 -5.63 15.51 21.95 0.34 -5.29 16 5 C -0.10 0.52 5.65 29.85 0.17 0.68 16 6 C -0.10 0.28 3.15 -10.21 -0.03 0.25 16 7 H 0.09 0.08 7.68 -2.39 -0.02 0.06 16 8 C -0.15 0.02 7.45 31.18 0.23 0.25 16 9 C 0.12 -0.05 4.21 45.52 0.19 0.14 16 10 H 0.10 0.37 7.50 -2.38 -0.02 0.35 16 11 N -0.69 -0.17 5.36 -443.21 -2.37 -2.54 16 12 C 0.60 2.99 7.82 86.69 0.68 3.67 16 13 O -0.57 -6.28 16.48 -4.01 -0.07 -6.35 16 14 C -0.12 -0.28 6.99 40.81 0.29 0.00 16 15 C 0.12 -0.38 11.27 83.85 0.95 0.57 16 16 N -0.35 1.34 3.69 -347.10 -1.28 0.06 16 17 C 0.12 -1.17 6.91 86.38 0.60 -0.58 16 18 C 0.05 -0.33 4.94 71.98 0.36 0.03 16 19 O -0.30 0.76 9.60 -92.72 -0.89 -0.13 16 20 C 0.14 -0.09 6.68 22.52 0.15 0.06 16 21 C -0.08 -0.04 6.33 22.41 0.14 0.10 16 22 Cl -0.06 -0.09 28.51 -2.72 -0.08 -0.16 16 23 C -0.07 0.13 8.45 22.28 0.19 0.32 16 24 C -0.14 0.35 5.39 -19.85 -0.11 0.24 16 25 C -0.06 0.18 2.82 71.24 0.20 0.38 16 26 O -0.55 1.38 12.77 -148.98 -1.90 -0.52 16 27 Si 0.76 -2.39 29.78 68.60 2.04 -0.34 16 28 C -0.05 0.13 9.60 22.26 0.21 0.34 16 29 C -0.19 0.55 9.04 22.36 0.20 0.75 16 30 N -0.08 -0.21 13.65 37.02 0.51 0.29 16 31 N -0.21 -0.82 12.04 -50.00 -0.60 -1.42 16 32 C -0.12 0.77 7.39 31.12 0.23 1.00 16 33 H 0.13 -0.80 8.14 -2.39 -0.02 -0.82 16 34 H 0.06 0.02 8.13 -2.39 -0.02 0.00 16 35 H 0.06 0.01 8.13 -2.39 -0.02 -0.01 16 36 H 0.14 -1.33 8.14 -2.39 -0.02 -1.35 16 37 H 0.13 -1.20 7.86 -2.39 -0.02 -1.22 16 38 H 0.10 -0.23 7.91 -2.39 -0.02 -0.25 16 39 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 40 H 0.42 -1.33 8.40 -92.71 -0.78 -2.11 16 41 H 0.24 -2.26 8.06 -2.91 -0.02 -2.28 16 42 H 0.15 -2.23 8.08 -2.39 -0.02 -2.25 16 43 H 0.12 -1.28 8.14 -2.39 -0.02 -1.30 16 44 H 0.08 -0.45 7.66 -2.39 -0.02 -0.47 16 45 H 0.08 -0.66 7.66 -2.39 -0.02 -0.68 16 46 H 0.15 -0.68 4.87 -2.91 -0.01 -0.69 16 47 H 0.11 -0.27 7.96 -2.39 -0.02 -0.28 16 48 H 0.40 -4.06 8.70 -74.05 -0.64 -4.71 16 49 H -0.30 -1.28 7.11 99.48 0.71 -0.57 16 50 H -0.28 -0.52 7.11 99.48 0.71 0.19 16 51 H 0.15 -0.64 8.06 -2.91 -0.02 -0.66 16 52 H 0.15 -0.92 6.30 -2.91 -0.02 -0.94 16 53 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 54 H 0.11 -1.21 8.07 -2.39 -0.02 -1.23 16 Total: 0.00 -29.27 476.50 1.16 -28.10 By element: Atomic # 1 Polarization: -21.24 SS G_CDS: -0.39 Total: -21.63 kcal Atomic # 6 Polarization: 4.95 SS G_CDS: 6.41 Total: 11.35 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -3.75 Total: -3.61 kcal Atomic # 8 Polarization: -10.64 SS G_CDS: -3.06 Total: -13.70 kcal Atomic # 14 Polarization: -2.39 SS G_CDS: 2.04 Total: -0.34 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -0.08 Total: -0.16 kcal Total: -29.27 1.16 -28.10 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_7143556.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.972 kcal (2) G-P(sol) polarization free energy of solvation -29.267 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.239 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.165 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.103 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.075 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.19 seconds