Wall clock time and date at job start Sun Mar 7 2021 14:28:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34223 * 117.00004 * 2 1 4 4 O 1.20825 * 120.00605 * 0.02562 * 3 2 1 5 5 C 1.50706 * 119.99852 * 180.02562 * 3 2 1 6 6 C 1.53003 * 109.47008 * 180.02562 * 5 3 2 7 7 H 1.08996 * 112.85078 * 43.79996 * 6 5 3 8 8 C 1.53784 * 113.61467 * 174.99620 * 6 5 3 9 9 C 1.53781 * 87.07926 * 139.98056 * 8 6 5 10 10 H 1.09001 * 113.61688 * 89.20435 * 9 8 6 11 11 N 1.46505 * 113.61493 * 220.01981 * 9 8 6 12 12 C 1.34771 * 120.00476 * 203.47040 * 11 9 8 13 13 O 1.21282 * 119.99657 * 0.02562 * 12 11 9 14 14 C 1.50699 * 120.00381 * 179.97438 * 12 11 9 15 15 N 1.46501 * 109.46999 * 180.02562 * 14 12 11 16 16 C 1.36827 * 125.06464 * 264.97526 * 15 14 12 17 17 C 1.34236 * 109.93865 * 180.02562 * 16 15 14 18 18 C 1.50705 * 126.50052 * 180.02562 * 17 16 15 19 19 O 1.42901 * 109.46826 * 104.97690 * 18 17 16 20 20 Si 1.86299 * 109.47010 * 344.98079 * 18 17 16 21 21 C 1.46486 * 107.00124 * 0.02562 * 17 16 15 22 22 C 1.39591 * 134.03841 * 179.97438 * 21 17 16 23 23 C 1.36655 * 119.76796 * 180.02562 * 22 21 17 24 24 C 1.38792 * 120.52555 * 0.02562 * 23 22 21 25 25 C 1.37789 * 120.66852 * 0.22236 * 24 23 22 26 26 C 1.37695 * 125.05932 * 85.00479 * 15 14 12 27 27 C 1.53781 * 87.17390 * 334.60761 * 9 8 6 28 28 H 1.08997 * 109.47159 * 179.97438 * 1 2 3 29 29 H 1.09007 * 109.46238 * 299.99485 * 1 2 3 30 30 H 1.08995 * 109.47282 * 59.99425 * 1 2 3 31 31 H 1.08993 * 109.47259 * 60.00371 * 5 3 2 32 32 H 1.08998 * 109.47000 * 299.99939 * 5 3 2 33 33 H 1.09006 * 113.61221 * 25.43341 * 8 6 5 34 34 H 1.08996 * 113.69201 * 254.53682 * 8 6 5 35 35 H 0.97008 * 119.99755 * 23.47504 * 11 9 8 36 36 H 1.09003 * 109.46919 * 60.00382 * 14 12 11 37 37 H 1.09003 * 109.47005 * 300.00248 * 14 12 11 38 38 H 1.08003 * 125.03267 * 0.04409 * 16 15 14 39 39 H 1.08996 * 109.47358 * 224.97772 * 18 17 16 40 40 H 0.96703 * 114.00161 * 299.99967 * 19 18 17 41 41 H 1.48499 * 110.00511 * 58.67999 * 20 18 17 42 42 H 1.48504 * 109.99997 * 179.97438 * 20 18 17 43 43 H 1.08006 * 120.11047 * 0.05453 * 22 21 17 44 44 H 1.08002 * 119.73679 * 180.02562 * 23 22 21 45 45 H 1.08003 * 119.66372 * 180.02562 * 24 23 22 46 46 H 1.08002 * 120.10958 * 179.67736 * 25 24 23 47 47 H 1.09005 * 113.60936 * 139.93688 * 27 9 8 48 48 H 1.08997 * 113.61749 * 270.83725 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 -0.0006 6 6 4.0002 2.7420 0.0002 7 1 3.4253 3.3530 0.6960 8 6 5.5210 2.9347 0.1226 9 6 5.3811 4.0676 -0.9078 10 1 5.1852 5.0424 -0.4611 11 7 6.4642 4.1011 -1.8939 12 6 6.7539 5.2490 -2.5380 13 8 6.1183 6.2543 -2.3009 14 6 7.8684 5.2835 -3.5518 15 7 7.9829 6.6350 -4.1056 16 6 7.3946 7.0621 -5.2647 17 6 7.6996 8.3506 -5.4852 18 6 7.2489 9.1916 -6.6517 19 8 6.2274 10.0937 -6.2219 20 14 6.5768 8.0855 -7.9917 21 6 8.5538 8.7842 -4.3770 22 6 9.1796 9.9877 -4.0476 23 6 9.9321 10.0720 -2.9100 24 6 10.0799 8.9701 -2.0793 25 6 9.4752 7.7711 -2.3879 26 6 8.6993 7.6645 -3.5373 27 6 4.1145 3.3533 -1.4082 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3632 0.5138 0.8901 30 1 -0.3633 0.5139 -0.8899 31 1 3.9557 0.7809 -0.8908 32 1 3.9564 0.7805 0.8891 33 1 6.0993 2.0844 -0.2391 34 1 5.8413 3.2766 1.1067 35 1 6.9728 3.2970 -2.0832 36 1 7.6512 4.5788 -4.3545 37 1 8.8065 5.0079 -3.0701 38 1 6.7759 6.4528 -5.9070 39 1 8.0951 9.7588 -7.0392 40 1 5.4420 9.6572 -5.8644 41 1 5.4426 7.2833 -7.4670 42 1 6.1283 8.9028 -9.1476 43 1 9.0689 10.8494 -4.6894 44 1 10.4157 11.0036 -2.6555 45 1 10.6775 9.0524 -1.1834 46 1 9.6006 6.9179 -1.7377 47 1 3.2997 4.0330 -1.6575 48 1 4.3076 2.6179 -2.1891 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:28:09 Heat of formation + Delta-G solvation = -56.928007 kcal Electronic energy + Delta-G solvation = -31316.611581 eV Core-core repulsion = 26918.944231 eV Total energy + Delta-G solvation = -4397.667350 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.161 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -42.53996 -41.71714 -40.95229 -39.46402 -38.15897 -37.71038 -37.50822 -34.93422 -34.04538 -31.84192 -31.22947 -30.24221 -29.04842 -28.31002 -26.72460 -25.97928 -24.49959 -23.67253 -22.71485 -21.93410 -21.62311 -20.76686 -20.47883 -18.74494 -18.59164 -18.36186 -17.97009 -17.67959 -17.57160 -17.31918 -16.77118 -16.39935 -16.33235 -16.23692 -16.03556 -15.56169 -15.34172 -14.96619 -14.80202 -14.70310 -14.53128 -14.41353 -14.11022 -13.99574 -13.61916 -13.49794 -13.37975 -13.21120 -12.94734 -12.79778 -12.73272 -12.57124 -12.39607 -12.19567 -12.00839 -11.90007 -11.84055 -11.74836 -11.51070 -11.36247 -11.10532 -10.54736 -10.46765 -10.11313 -9.15921 -8.63379 -4.90883 0.14177 0.64142 1.15838 1.33952 1.42050 1.45113 1.60717 1.70430 1.76530 1.98936 2.24653 2.95047 3.40949 3.45671 3.49145 3.61223 3.67950 3.70582 3.76926 3.80344 3.86246 3.88492 4.05216 4.16991 4.22262 4.23216 4.25058 4.28007 4.31054 4.45371 4.49368 4.58778 4.61237 4.66933 4.71713 4.72463 4.77108 4.79139 4.83830 4.89874 4.99299 5.07349 5.13839 5.23284 5.39353 5.50966 5.55978 5.66549 5.73804 5.75206 6.19114 6.23934 6.49660 6.52592 6.69465 7.16893 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.366 6.366 3 C 0.453 3.547 4 O -0.547 6.547 5 C -0.094 4.094 6 C -0.100 4.100 7 H 0.080 0.920 8 C -0.114 4.114 9 C 0.117 3.883 10 H 0.080 0.920 11 N -0.697 5.697 12 C 0.488 3.512 13 O -0.579 6.579 14 C 0.088 3.912 15 N -0.466 5.466 16 C 0.074 3.926 17 C -0.217 4.217 18 C -0.057 4.057 19 O -0.556 6.556 20 Si 0.789 3.211 21 C -0.116 4.116 22 C -0.088 4.088 23 C -0.154 4.154 24 C -0.107 4.107 25 C -0.133 4.133 26 C 0.091 3.909 27 C -0.146 4.146 28 H 0.129 0.871 29 H 0.057 0.943 30 H 0.057 0.943 31 H 0.137 0.863 32 H 0.136 0.864 33 H 0.127 0.873 34 H 0.083 0.917 35 H 0.424 0.576 36 H 0.166 0.834 37 H 0.148 0.852 38 H 0.196 0.804 39 H 0.110 0.890 40 H 0.381 0.619 41 H -0.275 1.275 42 H -0.304 1.304 43 H 0.118 0.882 44 H 0.136 0.864 45 H 0.146 0.854 46 H 0.134 0.866 47 H 0.039 0.961 48 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.462 -13.180 0.181 14.268 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C 0.298 3.702 4 O -0.437 6.437 5 C -0.131 4.131 6 C -0.119 4.119 7 H 0.098 0.902 8 C -0.152 4.152 9 C 0.012 3.988 10 H 0.098 0.902 11 N -0.351 5.351 12 C 0.274 3.726 13 O -0.457 6.457 14 C -0.037 4.037 15 N -0.148 5.148 16 C -0.052 4.052 17 C -0.224 4.224 18 C -0.165 4.165 19 O -0.364 6.364 20 Si 0.692 3.308 21 C -0.121 4.121 22 C -0.107 4.107 23 C -0.173 4.173 24 C -0.127 4.127 25 C -0.154 4.154 26 C -0.014 4.014 27 C -0.185 4.185 28 H 0.147 0.853 29 H 0.076 0.924 30 H 0.076 0.924 31 H 0.154 0.846 32 H 0.154 0.846 33 H 0.145 0.855 34 H 0.102 0.898 35 H 0.263 0.737 36 H 0.183 0.817 37 H 0.166 0.834 38 H 0.213 0.787 39 H 0.128 0.872 40 H 0.229 0.771 41 H -0.202 1.202 42 H -0.232 1.232 43 H 0.136 0.864 44 H 0.154 0.846 45 H 0.164 0.836 46 H 0.152 0.848 47 H 0.058 0.942 48 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 4.507 -12.289 -0.210 13.091 hybrid contribution -1.524 0.948 0.943 2.027 sum 2.983 -11.341 0.733 11.750 Atomic orbital electron populations 1.23468 0.75426 1.05469 1.02143 1.86508 1.24488 1.33472 1.83794 1.24672 0.93811 0.80766 0.70972 1.90692 1.68463 1.37629 1.46909 1.21545 0.84731 0.98310 1.08556 1.22178 0.97382 0.94542 0.97837 0.90192 1.23343 0.94408 0.98071 0.99357 1.22358 0.87018 0.99139 0.90297 0.90221 1.45771 1.36055 1.12277 1.40950 1.21603 0.85125 0.83391 0.82493 1.90808 1.53254 1.35803 1.65866 1.22035 0.99811 0.82868 0.98951 1.43436 1.42071 1.09674 1.19626 1.22005 0.98725 0.95288 0.89157 1.20708 1.06948 0.94873 0.99868 1.24736 0.93837 0.97767 1.00150 1.86552 1.29919 1.36516 1.83391 0.94199 0.83260 0.79345 0.73976 1.19345 1.01926 0.94066 0.96738 1.20449 0.96702 0.96040 0.97519 1.20918 1.01136 0.99861 0.95380 1.21138 0.99514 0.91936 1.00062 1.20258 0.99967 0.99634 0.95522 1.18410 0.98217 0.88207 0.96565 1.23605 0.97167 1.00015 0.97696 0.85327 0.92376 0.92411 0.84560 0.84634 0.85489 0.89811 0.73699 0.81658 0.83432 0.78716 0.87174 0.77092 1.20168 1.23184 0.86394 0.84616 0.83649 0.84769 0.94153 0.87443 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.38 10.56 -51.34 -0.54 -0.93 16 3 C 0.45 0.83 7.96 71.24 0.57 1.40 16 4 O -0.55 -5.50 15.51 21.97 0.34 -5.16 16 5 C -0.09 0.72 5.65 29.85 0.17 0.89 16 6 C -0.10 0.47 3.15 -10.21 -0.03 0.43 16 7 H 0.08 0.09 7.68 -2.39 -0.02 0.07 16 8 C -0.11 1.12 7.39 31.12 0.23 1.35 16 9 C 0.12 -0.39 4.21 45.52 0.19 -0.19 16 10 H 0.08 0.37 7.50 -2.39 -0.02 0.35 16 11 N -0.70 5.30 5.36 -440.04 -2.36 2.94 16 12 C 0.49 -0.32 7.90 87.66 0.69 0.37 16 13 O -0.58 -7.25 16.04 -3.04 -0.05 -7.30 16 14 C 0.09 -0.66 6.48 85.63 0.56 -0.11 16 15 N -0.47 -0.88 2.27 -519.98 -1.18 -2.06 16 16 C 0.07 0.14 9.89 83.00 0.82 0.96 16 17 C -0.22 -1.38 5.57 -18.63 -0.10 -1.48 16 18 C -0.06 -0.27 3.06 71.24 0.22 -0.06 16 19 O -0.56 -5.31 12.88 -148.98 -1.92 -7.23 16 20 Si 0.79 -0.37 30.82 68.60 2.11 1.74 16 21 C -0.12 -1.21 6.35 -20.20 -0.13 -1.34 16 22 C -0.09 -0.89 10.05 22.23 0.22 -0.67 16 23 C -0.15 -1.08 9.97 22.03 0.22 -0.86 16 24 C -0.11 -0.55 10.01 22.30 0.22 -0.32 16 25 C -0.13 -0.71 10.00 22.37 0.22 -0.48 16 26 C 0.09 0.69 6.80 39.03 0.27 0.95 16 27 C -0.15 0.36 7.45 31.18 0.23 0.59 16 28 H 0.13 -0.92 8.14 -2.39 -0.02 -0.94 16 29 H 0.06 -0.02 8.13 -2.38 -0.02 -0.04 16 30 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 31 H 0.14 -1.77 7.85 -2.39 -0.02 -1.79 16 32 H 0.14 -1.65 8.14 -2.39 -0.02 -1.67 16 33 H 0.13 -2.08 8.07 -2.38 -0.02 -2.10 16 34 H 0.08 -0.77 8.14 -2.39 -0.02 -0.79 16 35 H 0.42 -6.98 8.71 -92.70 -0.81 -7.79 16 36 H 0.17 -2.67 8.12 -2.39 -0.02 -2.69 16 37 H 0.15 -1.96 8.14 -2.39 -0.02 -1.98 16 38 H 0.20 -0.93 6.27 -2.91 -0.02 -0.95 16 39 H 0.11 0.48 7.96 -2.39 -0.02 0.46 16 40 H 0.38 1.84 8.70 -74.06 -0.64 1.20 16 41 H -0.28 -0.50 7.00 99.48 0.70 0.19 16 42 H -0.30 -2.23 7.11 99.48 0.71 -1.52 16 43 H 0.12 1.08 8.06 -2.91 -0.02 1.06 16 44 H 0.14 0.40 8.06 -2.91 -0.02 0.37 16 45 H 0.15 -0.02 8.06 -2.91 -0.02 -0.05 16 46 H 0.13 0.01 8.06 -2.91 -0.02 -0.01 16 47 H 0.04 0.21 8.14 -2.38 -0.02 0.19 16 48 H 0.11 -0.75 7.90 -2.39 -0.02 -0.77 16 Total: 0.00 -36.37 407.97 1.74 -34.63 By element: Atomic # 1 Polarization: -18.80 SS G_CDS: -0.43 Total: -19.23 kcal Atomic # 6 Polarization: -3.17 SS G_CDS: 5.76 Total: 2.60 kcal Atomic # 7 Polarization: 4.41 SS G_CDS: -3.54 Total: 0.88 kcal Atomic # 8 Polarization: -18.45 SS G_CDS: -2.17 Total: -20.62 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: 2.11 Total: 1.74 kcal Total: -36.37 1.74 -34.63 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.299 kcal (2) G-P(sol) polarization free energy of solvation -36.370 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.669 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.741 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.629 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.928 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds