Wall clock time and date at job start Sun Mar 7 2021 16:14:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 H 1.00906 * 109.47068 * 2 1 4 4 C 1.46894 * 109.47243 * 120.00132 * 2 1 3 5 5 C 1.46905 * 109.46984 * 240.00095 * 2 1 3 6 6 C 1.53007 * 109.46819 * 174.99940 * 5 2 1 7 7 H 1.09001 * 109.46678 * 54.99803 * 6 5 2 8 8 C 1.53004 * 109.46602 * 174.99868 * 6 5 2 9 9 C 1.53007 * 109.46602 * 179.97438 * 8 6 5 10 10 C 1.52998 * 109.47116 * 299.99907 * 9 8 6 11 11 H 1.09003 * 109.47242 * 300.00367 * 10 9 8 12 12 N 1.46499 * 109.47087 * 180.02562 * 10 9 8 13 13 C 1.34777 * 119.99689 * 155.00188 * 12 10 9 14 14 O 1.21273 * 120.00331 * 359.97438 * 13 12 10 15 15 C 1.50707 * 119.99569 * 180.02562 * 13 12 10 16 16 O 1.42897 * 109.46880 * 179.97438 * 15 13 12 17 17 C 1.35922 * 116.99994 * 180.02562 * 16 15 13 18 18 C 1.38792 * 120.05945 * 179.97438 * 17 16 15 19 19 Br 1.89095 * 120.03615 * 0.03528 * 18 17 16 20 20 C 1.38237 * 119.92363 * 179.76535 * 18 17 16 21 21 C 1.38247 * 120.04956 * 0.50047 * 20 18 17 22 22 C 1.50699 * 119.94179 * 179.77046 * 21 20 18 23 23 O 1.42892 * 109.47249 * 119.72765 * 22 21 20 24 24 Si 1.86298 * 109.47032 * 359.72151 * 22 21 20 25 25 C 1.38278 * 120.11242 * 359.49688 * 21 20 18 26 26 C 1.38143 * 120.07453 * 0.24773 * 25 21 20 27 27 C 1.53003 * 109.47034 * 60.00255 * 10 9 8 28 28 C 1.52998 * 109.47116 * 294.99775 * 6 5 2 29 29 H 1.09000 * 109.46871 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.46919 * 300.00167 * 1 2 3 31 31 H 1.09002 * 109.47186 * 60.00313 * 1 2 3 32 32 H 1.09003 * 109.47187 * 180.02562 * 4 2 1 33 33 H 1.09000 * 109.46919 * 299.99701 * 4 2 1 34 34 H 1.08994 * 109.47428 * 59.99607 * 4 2 1 35 35 H 1.09001 * 109.47100 * 55.00327 * 5 2 1 36 36 H 1.08999 * 109.47192 * 294.99744 * 5 2 1 37 37 H 1.09001 * 109.47134 * 60.00579 * 8 6 5 38 38 H 1.08993 * 109.47099 * 299.99976 * 8 6 5 39 39 H 1.08994 * 109.46739 * 180.02562 * 9 8 6 40 40 H 1.09003 * 109.47139 * 59.99696 * 9 8 6 41 41 H 0.97002 * 120.00151 * 334.99859 * 12 10 9 42 42 H 1.08998 * 109.47025 * 59.99737 * 15 13 12 43 43 H 1.08995 * 109.47081 * 300.00012 * 15 13 12 44 44 H 1.08004 * 119.97562 * 180.25166 * 20 18 17 45 45 H 1.09004 * 109.46453 * 239.72833 * 22 21 20 46 46 H 0.96703 * 114.00176 * 299.99748 * 23 22 21 47 47 H 1.48506 * 109.99834 * 58.68765 * 24 22 21 48 48 H 1.48502 * 110.00011 * 180.02562 * 24 22 21 49 49 H 1.08004 * 119.95795 * 180.22923 * 25 21 20 50 50 H 1.08006 * 120.02123 * 180.02562 * 26 25 21 51 51 H 1.08993 * 109.47505 * 60.00133 * 27 10 9 52 52 H 1.09003 * 109.46936 * 180.02562 * 27 10 9 53 53 H 1.09003 * 109.47242 * 300.00367 * 28 6 5 54 54 H 1.09003 * 109.47181 * 60.00360 * 28 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9514 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9586 -0.6925 -1.1995 6 6 3.4835 -0.5845 -1.2639 7 1 3.9140 -0.9635 -0.3370 8 6 4.0038 -1.4096 -2.4427 9 6 5.5286 -1.3010 -2.5075 10 6 5.9282 0.1640 -2.6946 11 1 5.4972 0.5427 -3.6214 12 7 7.3881 0.2678 -2.7572 13 6 7.9630 1.3056 -3.3968 14 8 7.2718 2.1531 -3.9208 15 6 9.4649 1.4120 -3.4617 16 8 9.8281 2.5882 -4.1874 17 6 11.1562 2.8342 -4.3392 18 6 11.5800 3.9587 -5.0336 19 35 10.3103 5.1513 -5.7691 20 6 12.9315 4.2087 -5.1821 21 6 13.8600 3.3344 -4.6485 22 6 15.3326 3.6067 -4.8163 23 8 15.9408 3.7458 -3.5308 24 14 15.5668 5.1790 -5.7877 25 6 13.4397 2.2136 -3.9563 26 6 12.0904 1.9617 -3.8005 27 6 5.4078 0.9890 -1.5158 28 6 3.8836 0.8804 -1.4506 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5139 0.8900 31 1 -0.3634 0.5138 -0.8900 32 1 3.0487 -0.6921 1.1996 33 1 1.5954 -0.1786 2.0893 34 1 1.5953 -1.7201 1.1994 35 1 1.5241 -0.2329 -2.0872 36 1 1.6703 -1.7428 -1.1558 37 1 3.5733 -1.0305 -3.3696 38 1 3.7187 -2.4531 -2.3097 39 1 5.8992 -1.8884 -3.3476 40 1 5.9596 -1.6796 -1.5807 41 1 7.9410 -0.4103 -2.3384 42 1 9.8699 0.5347 -3.9661 43 1 9.8691 1.4689 -2.4511 44 1 13.2622 5.0857 -5.7188 45 1 15.7968 2.7773 -5.3501 46 1 15.5762 4.4665 -2.9991 47 1 14.9108 6.3118 -5.0862 48 1 17.0150 5.4584 -5.9606 49 1 14.1672 1.5342 -3.5373 50 1 11.7631 1.0862 -3.2593 51 1 5.8387 0.6104 -0.5890 52 1 5.6921 2.0328 -1.6492 53 1 3.4530 1.2594 -2.3775 54 1 3.5129 1.4682 -0.6108 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17509628_6201210.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 16:14:43 Heat of formation + Delta-G solvation = 28.049030 kcal Electronic energy + Delta-G solvation = -32929.945600 eV Core-core repulsion = 28419.237145 eV Total energy + Delta-G solvation = -4510.708455 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.127 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -42.21042 -41.72433 -40.87605 -39.44355 -38.73438 -37.37829 -35.56670 -33.55212 -32.41590 -32.04260 -31.88003 -30.47218 -29.52933 -29.39136 -27.49356 -26.39025 -25.40045 -24.17951 -23.75772 -22.71064 -22.32088 -21.64762 -20.90798 -19.60170 -19.26757 -18.66140 -18.29400 -17.58964 -17.54138 -17.39663 -17.28872 -16.95215 -16.45534 -16.29428 -16.00061 -15.71763 -15.53313 -15.30985 -15.13302 -14.95997 -14.83486 -14.36381 -14.10372 -14.01961 -13.89315 -13.86669 -13.60322 -13.55761 -13.41971 -13.26103 -13.21316 -13.18808 -13.04294 -12.47173 -12.40822 -12.25887 -12.16347 -12.12581 -11.91820 -11.88752 -11.79189 -11.50581 -11.31118 -11.24321 -10.99047 -10.68780 -10.18540 -10.03929 -9.35973 -4.99600 -0.07067 0.04058 0.59769 1.02331 1.24318 1.37661 1.40398 1.51581 1.89695 2.35485 2.45652 2.88790 2.98869 3.22023 3.36950 3.43907 3.47759 3.52372 3.55873 3.71196 3.74247 3.79194 3.85366 3.98869 4.00224 4.05156 4.09490 4.12500 4.18994 4.25563 4.28293 4.30296 4.32805 4.38105 4.45307 4.46443 4.50826 4.57989 4.62868 4.63615 4.75105 4.75757 4.80686 4.86009 4.89114 4.99392 5.00469 5.02586 5.14433 5.18934 5.26731 5.26953 5.32159 5.41076 5.48499 6.01015 6.39593 6.43937 7.09120 Molecular weight = 428.13amu Principal moments of inertia in cm(-1) A = 0.015128 B = 0.001402 C = 0.001330 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1850.467956 B =19969.693186 C =21047.604030 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.047 4.047 2 N -0.376 5.376 3 H 0.431 0.569 4 C -0.056 4.056 5 C 0.001 3.999 6 C -0.105 4.105 7 H 0.117 0.883 8 C -0.110 4.110 9 C -0.124 4.124 10 C 0.140 3.860 11 H 0.058 0.942 12 N -0.711 5.711 13 C 0.514 3.486 14 O -0.565 6.565 15 C 0.027 3.973 16 O -0.303 6.303 17 C 0.151 3.849 18 C -0.140 4.140 19 Br -0.049 7.049 20 C -0.057 4.057 21 C -0.148 4.148 22 C -0.060 4.060 23 O -0.543 6.543 24 Si 0.731 3.269 25 C -0.034 4.034 26 C -0.193 4.193 27 C -0.130 4.130 28 C -0.125 4.125 29 H 0.123 0.877 30 H 0.125 0.875 31 H 0.122 0.878 32 H 0.123 0.877 33 H 0.126 0.874 34 H 0.126 0.874 35 H 0.135 0.865 36 H 0.147 0.853 37 H 0.065 0.935 38 H 0.094 0.906 39 H 0.064 0.936 40 H 0.091 0.909 41 H 0.419 0.581 42 H 0.126 0.874 43 H 0.127 0.873 44 H 0.144 0.856 45 H 0.137 0.863 46 H 0.387 0.613 47 H -0.286 1.286 48 H -0.300 1.300 49 H 0.155 0.845 50 H 0.175 0.825 51 H 0.085 0.915 52 H 0.035 0.965 53 H 0.068 0.932 54 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -35.065 -20.181 20.596 45.398 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 N 0.047 4.953 3 H 0.268 0.732 4 C -0.198 4.198 5 C -0.121 4.121 6 C -0.124 4.124 7 H 0.135 0.865 8 C -0.148 4.148 9 C -0.162 4.162 10 C 0.036 3.964 11 H 0.076 0.924 12 N -0.365 5.365 13 C 0.300 3.700 14 O -0.443 6.443 15 C -0.050 4.050 16 O -0.215 6.215 17 C 0.103 3.897 18 C -0.220 4.220 19 Br 0.036 6.964 20 C -0.076 4.076 21 C -0.150 4.150 22 C -0.171 4.171 23 O -0.351 6.351 24 Si 0.638 3.362 25 C -0.052 4.052 26 C -0.212 4.212 27 C -0.169 4.169 28 C -0.163 4.163 29 H 0.142 0.858 30 H 0.144 0.856 31 H 0.140 0.860 32 H 0.141 0.859 33 H 0.144 0.856 34 H 0.144 0.856 35 H 0.153 0.847 36 H 0.165 0.835 37 H 0.084 0.916 38 H 0.113 0.887 39 H 0.083 0.917 40 H 0.110 0.890 41 H 0.257 0.743 42 H 0.143 0.857 43 H 0.144 0.856 44 H 0.161 0.839 45 H 0.154 0.846 46 H 0.236 0.764 47 H -0.212 1.212 48 H -0.228 1.228 49 H 0.173 0.827 50 H 0.192 0.808 51 H 0.103 0.897 52 H 0.054 0.946 53 H 0.087 0.913 54 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -35.662 -18.966 19.656 44.920 hybrid contribution 1.133 0.507 1.014 1.603 sum -34.529 -18.459 20.670 44.274 Atomic orbital electron populations 1.24142 0.75435 1.09731 1.09590 1.44929 1.16131 1.19256 1.14975 0.73191 1.24234 1.05902 1.02771 0.86857 1.23955 0.96081 1.03733 0.88332 1.21680 0.93104 0.95612 1.01990 0.86495 1.21450 0.93492 1.01623 0.98251 1.21794 0.97876 0.92700 1.03798 1.21171 0.78572 0.97659 0.99028 0.92393 1.45824 1.08568 1.25864 1.56230 1.20364 0.89786 0.81858 0.78014 1.90784 1.65417 1.41475 1.46647 1.22896 0.93240 0.88812 1.00081 1.86239 1.20144 1.43901 1.71255 1.18749 0.83339 0.93199 0.94376 1.21115 0.93915 0.97922 1.09039 1.96772 1.56610 1.59673 1.83322 1.20930 0.89972 0.99198 0.97494 1.20210 0.95541 0.96847 1.02369 1.24850 0.90176 1.12030 0.90023 1.86586 1.63791 1.57000 1.27689 0.94383 0.78816 0.75092 0.87943 1.21215 0.95560 0.95119 0.93293 1.21589 0.92681 1.01699 1.05243 1.21854 0.97442 0.99123 0.98468 1.21757 0.94471 0.96424 1.03628 0.85814 0.85622 0.85985 0.85864 0.85579 0.85578 0.84697 0.83531 0.91574 0.88732 0.91747 0.89027 0.74300 0.85678 0.85570 0.83891 0.84567 0.76400 1.21246 1.22779 0.82690 0.80802 0.89683 0.94580 0.91320 0.88875 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.98 9.19 127.69 1.17 4.15 16 2 N -0.38 24.42 0.66 -948.84 -0.62 23.79 16 3 H 0.43 -28.67 6.62 -89.69 -0.59 -29.27 16 4 C -0.06 3.54 8.93 127.69 1.14 4.68 16 5 C 0.00 -0.06 4.12 86.30 0.36 0.29 16 6 C -0.11 5.57 2.07 -10.79 -0.02 5.55 16 7 H 0.12 -6.58 6.18 -2.39 -0.01 -6.59 16 8 C -0.11 4.90 5.20 30.60 0.16 5.06 16 9 C -0.12 4.71 5.39 30.60 0.16 4.88 16 10 C 0.14 -4.34 2.45 44.99 0.11 -4.23 16 11 H 0.06 -1.37 7.58 -2.39 -0.02 -1.39 16 12 N -0.71 20.11 5.08 -442.53 -2.25 17.86 16 13 C 0.51 -9.52 7.87 87.66 0.69 -8.83 16 14 O -0.57 3.88 16.16 16.03 0.26 4.14 16 15 C 0.03 -0.60 5.22 71.24 0.37 -0.23 16 16 O -0.30 3.38 9.01 -73.63 -0.66 2.72 16 17 C 0.15 -1.81 6.68 22.52 0.15 -1.66 16 18 C -0.14 1.18 6.24 22.40 0.14 1.31 16 19 Br -0.05 0.24 33.16 -20.37 -0.68 -0.43 16 20 C -0.06 0.62 8.40 22.27 0.19 0.80 16 21 C -0.15 2.02 5.39 -19.85 -0.11 1.91 16 22 C -0.06 0.80 2.82 71.24 0.20 1.01 16 23 O -0.54 5.86 12.77 -148.98 -1.90 3.96 16 24 Si 0.73 -8.07 29.78 68.60 2.04 -6.03 16 25 C -0.03 0.56 9.60 22.26 0.21 0.77 16 26 C -0.19 3.51 9.04 22.36 0.20 3.71 16 27 C -0.13 4.57 5.49 30.58 0.17 4.74 16 28 C -0.12 5.74 4.96 30.58 0.15 5.89 16 29 H 0.12 -7.75 8.14 -2.39 -0.02 -7.77 16 30 H 0.13 -7.86 8.14 -2.39 -0.02 -7.88 16 31 H 0.12 -7.57 8.11 -2.39 -0.02 -7.59 16 32 H 0.12 -7.75 6.19 -2.39 -0.01 -7.77 16 33 H 0.13 -7.95 8.14 -2.39 -0.02 -7.97 16 34 H 0.13 -7.98 8.11 -2.39 -0.02 -8.00 16 35 H 0.13 -8.13 8.09 -2.39 -0.02 -8.15 16 36 H 0.15 -9.17 8.09 -2.39 -0.02 -9.19 16 37 H 0.07 -2.73 8.14 -2.39 -0.02 -2.75 16 38 H 0.09 -4.39 8.14 -2.39 -0.02 -4.41 16 39 H 0.06 -2.18 8.14 -2.39 -0.02 -2.19 16 40 H 0.09 -3.76 8.14 -2.39 -0.02 -3.78 16 41 H 0.42 -14.70 8.60 -92.71 -0.80 -15.50 16 42 H 0.13 -3.48 7.66 -2.39 -0.02 -3.49 16 43 H 0.13 -3.58 7.66 -2.39 -0.02 -3.60 16 44 H 0.14 -1.72 4.87 -2.91 -0.01 -1.73 16 45 H 0.14 -2.17 7.96 -2.38 -0.02 -2.19 16 46 H 0.39 -6.08 8.70 -74.06 -0.64 -6.72 16 47 H -0.29 1.81 7.11 99.48 0.71 2.52 16 48 H -0.30 0.85 7.11 99.48 0.71 1.56 16 49 H 0.16 -3.07 8.06 -2.91 -0.02 -3.10 16 50 H 0.17 -4.58 6.30 -2.91 -0.02 -4.60 16 51 H 0.08 -3.23 8.14 -2.39 -0.02 -3.25 16 52 H 0.04 -0.90 8.14 -2.39 -0.02 -0.92 16 53 H 0.07 -2.89 8.14 -2.39 -0.02 -2.91 16 54 H 0.09 -4.86 6.63 -2.39 -0.02 -4.88 16 Total: 1.00 -88.26 436.73 0.57 -87.69 By element: Atomic # 1 Polarization: -162.44 SS G_CDS: -1.07 Total: -163.51 kcal Atomic # 6 Polarization: 24.37 SS G_CDS: 5.45 Total: 29.82 kcal Atomic # 7 Polarization: 44.52 SS G_CDS: -2.87 Total: 41.65 kcal Atomic # 8 Polarization: 13.12 SS G_CDS: -2.31 Total: 10.81 kcal Atomic # 14 Polarization: -8.07 SS G_CDS: 2.04 Total: -6.03 kcal Atomic # 35 Polarization: 0.24 SS G_CDS: -0.68 Total: -0.43 kcal Total: -88.26 0.57 -87.69 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17509628_6201210.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 115.737 kcal (2) G-P(sol) polarization free energy of solvation -88.260 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.477 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.572 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -87.688 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.049 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds