Wall clock time and date at job start Sun Mar 7 2021 07:56:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.37868 * 126.46156 * 2 1 4 4 C 1.46676 * 126.23370 * 359.92526 * 3 2 1 5 5 O 1.21698 * 120.00089 * 0.02562 * 4 3 2 6 6 N 1.34777 * 120.00403 * 180.02562 * 4 3 2 7 7 C 1.46506 * 119.99949 * 180.02562 * 6 4 3 8 8 H 1.09000 * 109.47020 * 324.99485 * 7 6 4 9 9 C 1.52999 * 109.47075 * 84.99839 * 7 6 4 10 10 C 1.52997 * 109.47317 * 59.99940 * 9 7 6 11 11 C 1.53000 * 109.47060 * 59.99960 * 10 9 7 12 12 H 1.08992 * 109.47399 * 59.99823 * 11 10 9 13 13 C 1.53001 * 109.46886 * 180.02562 * 11 10 9 14 14 N 1.46896 * 109.47098 * 185.00074 * 13 11 10 15 15 H 1.00903 * 109.47409 * 304.99521 * 14 13 11 16 16 C 1.46901 * 109.47554 * 64.99511 * 14 13 11 17 17 C 1.46899 * 109.47332 * 184.99679 * 14 13 11 18 18 C 1.53002 * 109.47233 * 299.99657 * 11 10 9 19 19 C 1.52997 * 109.46817 * 60.00194 * 18 11 10 20 20 N 1.37653 * 107.53530 * 180.19100 * 3 2 1 21 21 C 1.35528 * 108.64160 * 359.62351 * 20 3 2 22 22 C 1.50704 * 125.56035 * 180.11045 * 21 20 3 23 23 O 1.42903 * 109.47191 * 65.28991 * 22 21 20 24 24 Si 1.86303 * 109.46900 * 185.28711 * 22 21 20 25 25 C 1.35451 * 108.87542 * 0.37842 * 21 20 3 26 26 H 1.08993 * 109.47134 * 89.99961 * 1 2 3 27 27 H 1.08993 * 109.47283 * 210.00316 * 1 2 3 28 28 H 1.09004 * 109.46691 * 330.00530 * 1 2 3 29 29 H 0.97000 * 120.00195 * 359.97438 * 6 4 3 30 30 H 1.08996 * 109.46929 * 299.99044 * 9 7 6 31 31 H 1.09002 * 109.46716 * 179.97438 * 9 7 6 32 32 H 1.09002 * 109.47153 * 299.99641 * 10 9 7 33 33 H 1.09001 * 109.46832 * 179.97438 * 10 9 7 34 34 H 1.09008 * 109.46864 * 304.99696 * 13 11 10 35 35 H 1.09000 * 109.47679 * 64.99728 * 13 11 10 36 36 H 1.09001 * 109.46753 * 300.00556 * 16 14 13 37 37 H 1.09004 * 109.46945 * 59.99929 * 16 14 13 38 38 H 1.08998 * 109.47482 * 180.02562 * 16 14 13 39 39 H 1.09006 * 109.47132 * 59.99591 * 17 14 13 40 40 H 1.09006 * 109.47546 * 179.97438 * 17 14 13 41 41 H 1.09004 * 109.47368 * 299.99640 * 17 14 13 42 42 H 1.08993 * 109.47662 * 180.02562 * 18 11 10 43 43 H 1.09002 * 109.47075 * 300.00932 * 18 11 10 44 44 H 1.09002 * 109.47153 * 60.00231 * 19 18 11 45 45 H 1.09001 * 109.47289 * 180.02562 * 19 18 11 46 46 H 0.97005 * 125.67363 * 179.73466 * 20 3 2 47 47 H 1.08999 * 109.47127 * 305.28590 * 22 21 20 48 48 H 0.96696 * 113.99867 * 59.99673 * 23 22 21 49 49 H 1.48508 * 109.99865 * 180.02562 * 24 22 21 50 50 H 1.48504 * 109.99902 * 301.31863 * 24 22 21 51 51 H 1.07998 * 126.06605 * 179.78274 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1088 0.0000 4 6 1.8900 2.5092 -0.0015 5 8 0.7028 2.7766 -0.0025 6 7 2.8038 3.4998 -0.0019 7 6 2.3679 4.8985 -0.0028 8 1 1.4564 4.9946 -0.5927 9 6 2.0957 5.3489 1.4338 10 6 3.3753 5.2140 2.2617 11 6 4.4719 6.0895 1.6519 12 1 4.1476 7.1301 1.6511 13 6 5.7516 5.9542 2.4795 14 7 6.7669 6.8837 1.9667 15 1 6.9061 6.7194 0.9809 16 6 6.3146 8.2659 2.1737 17 6 8.0321 6.6702 2.6821 18 6 4.7442 5.6391 0.2153 19 6 3.4647 5.7740 -0.6126 20 7 3.6284 0.6623 -0.0044 21 6 3.6217 -0.6929 0.0014 22 6 4.8433 -1.5754 0.0016 23 8 5.5628 -1.3926 1.2227 24 14 4.3220 -3.3575 -0.1512 25 6 2.3379 -1.1248 0.0009 26 1 -0.3633 0.0000 -1.0276 27 1 -0.3633 -0.8899 0.5138 28 1 -0.3633 0.8901 0.5138 29 1 3.7502 3.2867 -0.0007 30 1 1.3144 4.7252 1.8681 31 1 1.7719 6.3896 1.4330 32 1 3.6995 4.1734 2.2625 33 1 3.1814 5.5353 3.2851 34 1 5.5368 6.1897 3.5219 35 1 6.1247 4.9326 2.4073 36 1 5.3758 8.4243 1.6429 37 1 6.1643 8.4434 3.2386 38 1 7.0678 8.9556 1.7928 39 1 8.3678 5.6446 2.5285 40 1 8.7857 7.3597 2.3013 41 1 7.8819 6.8478 3.7470 42 1 5.5257 6.2625 -0.2190 43 1 5.0684 4.5984 0.2161 44 1 3.1404 6.8146 -0.6134 45 1 3.6585 5.4527 -1.6360 46 1 4.4191 1.2243 -0.0090 47 1 5.4830 -1.3105 -0.8402 48 1 5.0536 -1.6100 2.0155 49 1 5.5177 -4.2382 -0.1515 50 1 3.4236 -3.7221 0.9737 51 1 2.0136 -2.1549 0.0014 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17509652_13940406.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:56:28 Heat of formation + Delta-G solvation = 94.699117 kcal Electronic energy + Delta-G solvation = -29063.494576 eV Core-core repulsion = 25276.976711 eV Total energy + Delta-G solvation = -3786.517865 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.212 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -44.65729 -43.46817 -42.04453 -40.17132 -38.70234 -36.64510 -34.48647 -33.75363 -33.59334 -32.28930 -31.99332 -30.06449 -28.94564 -28.04714 -27.49679 -25.40020 -24.61621 -23.90216 -22.50167 -21.93675 -21.63260 -21.51115 -20.46489 -20.06640 -19.75784 -19.13051 -18.27647 -17.99965 -17.64816 -17.25160 -17.24221 -16.94020 -16.66273 -16.35336 -16.31630 -16.20481 -16.01937 -15.97987 -15.85794 -15.74698 -15.36748 -15.16786 -15.00384 -14.88598 -14.80194 -14.66632 -14.45107 -14.32056 -14.23440 -13.91625 -13.69659 -13.39251 -13.04070 -12.99686 -12.87056 -12.58266 -11.94392 -11.65213 -11.29861 -10.63028 -10.00947 -5.64029 -1.54113 -0.51397 0.37606 0.40499 0.46626 0.62615 0.72933 0.90955 0.95136 1.11566 1.26806 1.33362 1.35583 1.46203 1.60187 1.64593 1.73244 1.76748 1.88817 2.07043 2.10154 2.18098 2.23415 2.26887 2.38984 2.39833 2.53839 2.67183 2.68525 2.70344 2.74315 2.86241 2.94105 3.13922 3.24945 3.35981 3.38765 3.41220 3.56577 3.58213 3.64557 3.74983 3.92696 3.97361 4.07386 4.25642 4.31431 4.46339 4.66447 4.80992 5.08500 5.30809 5.41629 5.47222 6.18237 Molecular weight = 323.21amu Principal moments of inertia in cm(-1) A = 0.012789 B = 0.003706 C = 0.003027 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2188.888938 B = 7552.611336 C = 9248.783965 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C -0.055 4.055 3 C -0.065 4.065 4 C 0.593 3.407 5 O -0.513 6.513 6 N -0.733 5.733 7 C 0.145 3.855 8 H 0.100 0.900 9 C -0.133 4.133 10 C -0.109 4.109 11 C -0.116 4.116 12 H 0.100 0.900 13 C -0.009 4.009 14 N -0.388 5.388 15 H 0.424 0.576 16 C -0.053 4.053 17 C -0.048 4.048 18 C -0.130 4.130 19 C -0.128 4.128 20 N -0.528 5.528 21 C 0.032 3.968 22 C -0.059 4.059 23 O -0.537 6.537 24 Si 0.715 3.285 25 C -0.198 4.198 26 H 0.073 0.927 27 H 0.067 0.933 28 H 0.080 0.920 29 H 0.388 0.612 30 H 0.082 0.918 31 H 0.079 0.921 32 H 0.071 0.929 33 H 0.076 0.924 34 H 0.132 0.868 35 H 0.130 0.870 36 H 0.124 0.876 37 H 0.124 0.876 38 H 0.125 0.875 39 H 0.123 0.877 40 H 0.125 0.875 41 H 0.123 0.877 42 H 0.064 0.936 43 H 0.073 0.927 44 H 0.088 0.912 45 H 0.082 0.918 46 H 0.411 0.589 47 H 0.120 0.880 48 H 0.381 0.619 49 H -0.253 1.253 50 H -0.253 1.253 51 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 15.737 20.000 5.181 25.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.064 4.064 3 C -0.177 4.177 4 C 0.381 3.619 5 O -0.387 6.387 6 N -0.386 5.386 7 C 0.041 3.959 8 H 0.118 0.882 9 C -0.171 4.171 10 C -0.147 4.147 11 C -0.135 4.135 12 H 0.118 0.882 13 C -0.130 4.130 14 N 0.035 4.965 15 H 0.260 0.740 16 C -0.195 4.195 17 C -0.190 4.190 18 C -0.168 4.168 19 C -0.165 4.165 20 N -0.125 5.125 21 C -0.085 4.085 22 C -0.169 4.169 23 O -0.343 6.343 24 Si 0.613 3.387 25 C -0.223 4.223 26 H 0.092 0.908 27 H 0.086 0.914 28 H 0.099 0.901 29 H 0.223 0.777 30 H 0.101 0.899 31 H 0.098 0.902 32 H 0.090 0.910 33 H 0.095 0.905 34 H 0.151 0.849 35 H 0.148 0.852 36 H 0.143 0.857 37 H 0.142 0.858 38 H 0.144 0.856 39 H 0.141 0.859 40 H 0.144 0.856 41 H 0.141 0.859 42 H 0.082 0.918 43 H 0.091 0.909 44 H 0.106 0.894 45 H 0.101 0.899 46 H 0.248 0.752 47 H 0.138 0.862 48 H 0.229 0.771 49 H -0.178 1.178 50 H -0.177 1.177 51 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 15.407 19.785 5.421 25.656 hybrid contribution 1.194 0.590 0.752 1.530 sum 16.602 20.375 6.173 26.998 Atomic orbital electron populations 1.20436 0.88634 1.03389 1.02919 1.20014 0.96189 0.90340 0.99813 1.20140 0.83552 0.93352 1.20659 1.17034 0.85836 0.82963 0.76054 1.90886 1.15835 1.83005 1.49002 1.45974 1.08939 1.06069 1.77620 1.20955 0.98626 0.79659 0.96677 0.88156 1.21948 0.97337 1.02944 0.94919 1.21473 0.93996 0.99507 0.99758 1.21857 0.93141 1.03554 0.94950 0.88222 1.24180 0.89565 0.95896 1.03388 1.45117 1.15889 1.16154 1.19323 0.73982 1.24209 1.06645 0.79452 1.09222 1.24155 0.83953 1.08835 1.02057 1.21807 0.99171 1.02011 0.93785 1.21809 0.93548 1.01397 0.99785 1.41756 1.06777 1.06496 1.57472 1.21063 0.96890 0.83130 1.07444 1.24861 0.92599 1.09590 0.89816 1.86567 1.42670 1.89488 1.15585 0.94053 0.82042 0.72060 0.90533 1.20729 0.90860 0.99478 1.11193 0.90800 0.91383 0.90074 0.77747 0.89885 0.90202 0.90986 0.90492 0.84944 0.85238 0.85725 0.85782 0.85639 0.85871 0.85638 0.85857 0.91788 0.90860 0.89377 0.89915 0.75221 0.86234 0.77060 1.17753 1.17694 0.83013 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.70 9.83 36.00 0.35 1.06 16 2 C -0.05 0.42 6.21 -104.16 -0.65 -0.22 16 3 C -0.07 0.63 7.06 -81.98 -0.58 0.05 16 4 C 0.59 -6.00 7.75 -12.85 -0.10 -6.10 16 5 O -0.51 3.09 14.46 5.19 0.08 3.17 16 6 N -0.73 11.32 4.23 -55.11 -0.23 11.09 16 7 C 0.15 -2.39 2.78 -67.93 -0.19 -2.58 16 8 H 0.10 -1.30 7.58 -51.93 -0.39 -1.70 16 9 C -0.13 2.29 5.60 -26.73 -0.15 2.14 16 10 C -0.11 2.34 5.05 -26.73 -0.13 2.20 16 11 C -0.12 3.07 2.07 -90.62 -0.19 2.88 16 12 H 0.10 -2.70 6.18 -51.93 -0.32 -3.02 16 13 C -0.01 0.26 4.12 -3.83 -0.02 0.25 16 14 N -0.39 12.68 0.66 -251.25 -0.17 12.51 16 15 H 0.42 -14.36 6.62 -39.29 -0.26 -14.62 16 16 C -0.05 1.68 8.93 60.07 0.54 2.22 16 17 C -0.05 1.53 9.19 60.06 0.55 2.08 16 18 C -0.13 3.26 4.79 -26.73 -0.13 3.13 16 19 C -0.13 2.60 5.61 -26.73 -0.15 2.45 16 20 N -0.53 6.49 5.99 -5.70 -0.03 6.46 16 21 C 0.03 -0.34 6.46 -81.95 -0.53 -0.87 16 22 C -0.06 0.66 3.08 36.01 0.11 0.78 16 23 O -0.54 5.59 12.88 -35.23 -0.45 5.14 16 24 Si 0.71 -7.25 30.56 -169.99 -5.19 -12.45 16 25 C -0.20 1.77 9.27 -39.98 -0.37 1.40 16 26 H 0.07 -0.53 8.14 -51.93 -0.42 -0.95 16 27 H 0.07 -0.54 8.14 -51.93 -0.42 -0.96 16 28 H 0.08 -0.48 6.49 -51.93 -0.34 -0.82 16 29 H 0.39 -7.19 6.00 -40.82 -0.24 -7.44 16 30 H 0.08 -1.10 8.14 -51.93 -0.42 -1.53 16 31 H 0.08 -1.42 8.14 -51.93 -0.42 -1.84 16 32 H 0.07 -1.46 7.60 -51.93 -0.39 -1.86 16 33 H 0.08 -1.61 8.14 -51.93 -0.42 -2.04 16 34 H 0.13 -3.99 8.09 -51.92 -0.42 -4.41 16 35 H 0.13 -3.93 8.09 -51.93 -0.42 -4.35 16 36 H 0.12 -3.86 6.19 -51.93 -0.32 -4.18 16 37 H 0.12 -3.86 8.11 -51.93 -0.42 -4.28 16 38 H 0.13 -3.96 8.14 -51.93 -0.42 -4.38 16 39 H 0.12 -3.89 8.11 -51.93 -0.42 -4.31 16 40 H 0.13 -3.97 8.14 -51.93 -0.42 -4.40 16 41 H 0.12 -3.85 8.14 -51.93 -0.42 -4.28 16 42 H 0.06 -1.77 6.62 -51.93 -0.34 -2.12 16 43 H 0.07 -1.82 6.50 -51.93 -0.34 -2.16 16 44 H 0.09 -1.82 8.14 -51.93 -0.42 -2.24 16 45 H 0.08 -1.55 8.14 -51.93 -0.42 -1.97 16 46 H 0.41 -6.45 8.19 -40.82 -0.33 -6.79 16 47 H 0.12 -1.48 7.96 -51.93 -0.41 -1.89 16 48 H 0.38 -4.76 8.70 45.56 0.40 -4.37 16 49 H -0.25 1.66 7.11 56.52 0.40 2.06 16 50 H -0.25 1.97 7.11 56.52 0.40 2.37 16 51 H 0.15 -1.50 6.19 -52.49 -0.32 -1.82 16 LS Contribution 385.44 15.07 5.81 5.81 Total: 1.00 -37.12 385.44 -10.56 -47.68 By element: Atomic # 1 Polarization: -81.53 SS G_CDS: -8.74 Total: -90.27 kcal Atomic # 6 Polarization: 12.49 SS G_CDS: -1.63 Total: 10.86 kcal Atomic # 7 Polarization: 30.49 SS G_CDS: -0.43 Total: 30.06 kcal Atomic # 8 Polarization: 8.68 SS G_CDS: -0.38 Total: 8.30 kcal Atomic # 14 Polarization: -7.25 SS G_CDS: -5.19 Total: -12.45 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -37.12 -10.56 -47.68 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17509652_13940406.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 142.376 kcal (2) G-P(sol) polarization free energy of solvation -37.115 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 105.261 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.561 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.677 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.699 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds