Wall clock time and date at job start Sun Mar 7 2021 07:57:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46907 * 1 3 3 H 1.00898 * 109.46603 * 2 1 4 4 C 1.46898 * 109.47413 * 120.00087 * 2 1 3 5 5 C 1.46903 * 109.46997 * 240.00278 * 2 1 3 6 6 C 1.52998 * 109.47064 * 65.99389 * 5 2 1 7 7 H 1.08995 * 109.47495 * 305.46472 * 6 5 2 8 8 C 1.53004 * 109.47064 * 65.46685 * 6 5 2 9 9 C 1.52993 * 109.47301 * 179.97438 * 8 6 5 10 10 C 1.53002 * 109.47295 * 299.99831 * 9 8 6 11 11 H 1.08998 * 109.47492 * 180.02562 * 10 9 8 12 12 N 1.46498 * 109.46827 * 300.00017 * 10 9 8 13 13 C 1.34771 * 120.00123 * 274.99436 * 12 10 9 14 14 O 1.21280 * 119.99955 * 0.02562 * 13 12 10 15 15 C 1.50701 * 120.00149 * 180.02562 * 13 12 10 16 16 O 1.42904 * 109.47188 * 180.02562 * 15 13 12 17 17 C 1.35899 * 117.00068 * 180.02562 * 16 15 13 18 18 C 1.38705 * 120.05648 * 179.97438 * 17 16 15 19 19 C 1.38169 * 119.94527 * 180.02562 * 18 17 16 20 20 C 1.50696 * 119.97491 * 180.02562 * 19 18 17 21 21 O 1.42901 * 109.47114 * 300.00306 * 20 19 18 22 22 Si 1.86295 * 109.47538 * 179.97438 * 20 19 18 23 23 C 1.38242 * 120.05412 * 359.97438 * 19 18 17 24 24 C 1.38287 * 120.11532 * 0.02562 * 23 19 18 25 25 C 1.38128 * 120.05068 * 359.68501 * 24 23 19 26 26 C 1.53004 * 109.46808 * 59.99867 * 10 9 8 27 27 C 1.52998 * 109.47064 * 299.99918 * 26 10 9 28 28 H 1.09001 * 109.46746 * 173.73262 * 1 2 3 29 29 H 1.09000 * 109.46816 * 293.72754 * 1 2 3 30 30 H 1.08994 * 109.47564 * 53.73513 * 1 2 3 31 31 H 1.09000 * 109.47418 * 180.02562 * 4 2 1 32 32 H 1.09005 * 109.47224 * 300.00619 * 4 2 1 33 33 H 1.09001 * 109.47022 * 59.99704 * 4 2 1 34 34 H 1.09002 * 109.46987 * 305.99558 * 5 2 1 35 35 H 1.09002 * 109.46852 * 185.99681 * 5 2 1 36 36 H 1.09007 * 109.46968 * 299.99991 * 8 6 5 37 37 H 1.09004 * 109.47195 * 59.99359 * 8 6 5 38 38 H 1.09004 * 109.47346 * 59.99664 * 9 8 6 39 39 H 1.09004 * 109.47647 * 179.97438 * 9 8 6 40 40 H 0.97004 * 120.00187 * 95.00252 * 12 10 9 41 41 H 1.08997 * 109.47442 * 300.00339 * 15 13 12 42 42 H 1.08999 * 109.47010 * 60.00403 * 15 13 12 43 43 H 1.08001 * 120.03087 * 0.02666 * 18 17 16 44 44 H 1.09004 * 109.47069 * 59.99806 * 20 19 18 45 45 H 0.96696 * 114.00334 * 180.02562 * 21 20 19 46 46 H 1.48501 * 110.00196 * 298.68455 * 22 20 19 47 47 H 1.48501 * 109.99968 * 59.99679 * 22 20 19 48 48 H 1.08001 * 119.94344 * 180.02562 * 23 19 18 49 49 H 1.07994 * 119.97558 * 179.97438 * 24 23 19 50 50 H 1.08003 * 120.02462 * 180.32023 * 25 24 23 51 51 H 1.08997 * 109.46869 * 180.02562 * 26 10 9 52 52 H 1.08995 * 109.47139 * 60.00350 * 26 10 9 53 53 H 1.08995 * 109.47495 * 300.00213 * 27 26 10 54 54 H 1.09008 * 109.47021 * 180.02562 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9588 -0.6925 1.1994 5 6 1.9587 -0.6925 -1.1995 6 6 1.5754 0.1106 -2.4441 7 1 0.5000 0.2877 -2.4453 8 6 2.3131 1.4510 -2.4334 9 6 1.9303 2.2538 -3.6783 10 6 2.3195 1.4675 -4.9318 11 1 2.0473 2.0397 -5.8187 12 7 3.7650 1.2295 -4.9296 13 6 4.6031 2.1669 -5.4145 14 8 4.1606 3.2078 -5.8523 15 6 6.0900 1.9218 -5.4128 16 8 6.7600 3.0532 -5.9724 17 6 8.1157 2.9936 -6.0454 18 6 8.8302 4.0566 -6.5780 19 6 10.2084 3.9933 -6.6516 20 6 10.9853 5.1480 -7.2295 21 8 10.5768 5.3680 -8.5811 22 14 12.8059 4.7553 -7.1865 23 6 10.8754 2.8721 -6.1944 24 6 10.1655 1.8110 -5.6630 25 6 8.7880 1.8718 -5.5818 26 6 1.5819 0.1271 -4.9425 27 6 1.9647 -0.6757 -3.6976 28 1 -0.3633 -1.0216 -0.1122 29 1 -0.3633 0.4135 0.9408 30 1 -0.3634 0.6078 -0.8285 31 1 3.0488 -0.6921 1.1996 32 1 1.5954 -0.1787 2.0894 33 1 1.5954 -1.7202 1.1994 34 1 1.5104 -1.6845 -1.2548 35 1 3.0434 -0.7864 -1.1474 36 1 2.0361 2.0110 -1.5401 37 1 3.3886 1.2738 -2.4322 38 1 0.8548 2.4309 -3.6799 39 1 2.4555 3.2089 -3.6705 40 1 4.1190 0.3971 -4.5792 41 1 6.4317 1.7673 -4.3894 42 1 6.3130 1.0362 -6.0079 43 1 8.3096 4.9330 -6.9349 44 1 10.7936 6.0456 -6.6414 45 1 11.0369 6.0982 -9.0172 46 1 13.2495 4.5560 -5.7834 47 1 13.0808 3.5333 -7.9843 48 1 11.9528 2.8247 -6.2524 49 1 10.6889 0.9360 -5.3070 50 1 8.2343 1.0450 -5.1619 51 1 1.8595 -0.4332 -5.8353 52 1 0.5064 0.3043 -4.9441 53 1 3.0402 -0.8528 -3.6960 54 1 1.4395 -1.6308 -3.7055 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17509652_4860298.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:57:45 Heat of formation + Delta-G solvation = 25.038514 kcal Electronic energy + Delta-G solvation = -31369.243391 eV Core-core repulsion = 27198.222394 eV Total energy + Delta-G solvation = -4171.020997 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.216 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -42.28263 -41.67751 -40.92681 -39.38427 -38.65678 -37.34711 -35.22142 -32.74235 -32.54649 -31.91972 -31.59768 -29.39298 -29.32121 -27.69883 -26.84398 -25.46463 -23.86382 -23.76786 -23.08334 -22.41055 -21.77165 -20.33083 -19.30436 -19.23366 -18.55890 -18.44279 -17.74105 -17.57507 -17.54806 -17.28495 -17.10500 -16.59714 -16.30640 -15.91827 -15.69602 -15.45426 -15.22161 -14.86896 -14.85577 -14.66807 -14.38813 -14.20104 -13.91859 -13.88085 -13.74392 -13.59453 -13.50663 -13.29328 -13.26917 -13.23802 -13.10851 -12.93394 -12.61973 -12.51307 -12.29994 -12.23323 -12.18742 -11.89196 -11.60340 -11.44866 -11.24078 -11.08433 -10.48005 -10.23728 -10.00947 -9.46088 -4.95619 0.03580 0.19192 1.02874 1.21854 1.35774 1.42389 1.60278 1.91380 2.45961 2.50062 2.87359 3.00023 3.21715 3.33673 3.44045 3.50920 3.54993 3.68128 3.70947 3.74997 3.83341 3.85689 3.91637 3.97578 4.04091 4.09698 4.11432 4.16041 4.19272 4.25927 4.27955 4.35395 4.36105 4.36648 4.41876 4.49414 4.51360 4.57734 4.68248 4.72042 4.81386 4.82575 4.84023 4.87074 5.01240 5.03488 5.04879 5.11293 5.15179 5.18070 5.27100 5.27531 5.29823 5.42949 5.49717 6.14474 6.38736 6.81677 7.07556 Molecular weight = 350.22amu Principal moments of inertia in cm(-1) A = 0.018207 B = 0.001906 C = 0.001810 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1537.476546 B =14684.355178 C =15465.387125 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.376 5.376 3 H 0.431 0.569 4 C -0.047 4.047 5 C 0.002 3.998 6 C -0.107 4.107 7 H 0.109 0.891 8 C -0.123 4.123 9 C -0.132 4.132 10 C 0.139 3.861 11 H 0.046 0.954 12 N -0.698 5.698 13 C 0.512 3.488 14 O -0.574 6.574 15 C 0.031 3.969 16 O -0.320 6.320 17 C 0.123 3.877 18 C -0.146 4.146 19 C -0.052 4.052 20 C -0.088 4.088 21 O -0.566 6.566 22 Si 0.779 3.221 23 C -0.183 4.183 24 C -0.071 4.071 25 C -0.197 4.197 26 C -0.125 4.125 27 C -0.112 4.112 28 H 0.125 0.875 29 H 0.124 0.876 30 H 0.120 0.880 31 H 0.125 0.875 32 H 0.123 0.877 33 H 0.123 0.877 34 H 0.146 0.854 35 H 0.144 0.856 36 H 0.088 0.912 37 H 0.079 0.921 38 H 0.083 0.917 39 H 0.035 0.965 40 H 0.419 0.581 41 H 0.133 0.867 42 H 0.120 0.880 43 H 0.121 0.879 44 H 0.091 0.909 45 H 0.404 0.596 46 H -0.281 1.281 47 H -0.296 1.296 48 H 0.118 0.882 49 H 0.160 0.840 50 H 0.174 0.826 51 H 0.064 0.936 52 H 0.087 0.913 53 H 0.080 0.920 54 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.470 -16.101 26.463 36.587 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 N 0.047 4.953 3 H 0.268 0.732 4 C -0.189 4.189 5 C -0.120 4.120 6 C -0.126 4.126 7 H 0.127 0.873 8 C -0.160 4.160 9 C -0.170 4.170 10 C 0.035 3.965 11 H 0.064 0.936 12 N -0.354 5.354 13 C 0.298 3.702 14 O -0.452 6.452 15 C -0.046 4.046 16 O -0.233 6.233 17 C 0.078 3.922 18 C -0.165 4.165 19 C -0.052 4.052 20 C -0.197 4.197 21 O -0.376 6.376 22 Si 0.684 3.316 23 C -0.201 4.201 24 C -0.089 4.089 25 C -0.215 4.215 26 C -0.163 4.163 27 C -0.149 4.149 28 H 0.144 0.856 29 H 0.143 0.857 30 H 0.138 0.862 31 H 0.144 0.856 32 H 0.141 0.859 33 H 0.141 0.859 34 H 0.164 0.836 35 H 0.162 0.838 36 H 0.107 0.893 37 H 0.098 0.902 38 H 0.101 0.899 39 H 0.054 0.946 40 H 0.259 0.741 41 H 0.150 0.850 42 H 0.138 0.862 43 H 0.139 0.861 44 H 0.109 0.891 45 H 0.255 0.745 46 H -0.208 1.208 47 H -0.224 1.224 48 H 0.136 0.864 49 H 0.177 0.823 50 H 0.191 0.809 51 H 0.082 0.918 52 H 0.106 0.894 53 H 0.099 0.901 54 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -19.811 -16.536 26.463 36.962 hybrid contribution -0.192 0.386 -0.450 0.623 sum -20.002 -16.149 26.013 36.573 Atomic orbital electron populations 1.24209 0.76275 1.09821 1.09455 1.44929 1.15998 1.19401 1.14968 0.73178 1.24144 1.05755 1.02500 0.86466 1.23998 1.06307 0.99544 0.82161 1.21655 1.03017 0.94146 0.93758 0.87345 1.21768 1.01821 0.95236 0.97220 1.21839 1.02136 0.98109 0.94960 1.21033 0.78960 0.98005 0.98521 0.93608 1.45728 1.06453 1.20043 1.63147 1.20483 0.88702 0.83852 0.77200 1.90803 1.78912 1.28518 1.46980 1.22855 0.89342 0.89456 1.02995 1.86143 1.16498 1.42052 1.78634 1.19098 0.81941 0.95018 0.96184 1.20316 0.93111 0.99346 1.03722 1.19474 0.93141 0.95254 0.97371 1.24982 1.10145 0.98685 0.85935 1.86441 1.68468 1.58586 1.24142 0.94105 0.74709 0.83965 0.78818 1.21035 0.99444 0.95051 1.04546 1.21265 0.93885 0.98081 0.95683 1.21601 0.95418 0.98582 1.05904 1.21796 1.00996 0.93434 1.00055 1.21511 1.03013 0.98796 0.91628 0.85607 0.85708 0.86159 0.85616 0.85883 0.85889 0.83633 0.83798 0.89342 0.90234 0.89888 0.94558 0.74104 0.84957 0.86225 0.86122 0.89077 0.74494 1.20846 1.22361 0.86441 0.82263 0.80875 0.91757 0.89420 0.90104 0.88910 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.53 8.87 127.69 1.13 4.66 16 2 N -0.38 24.98 0.66 -948.82 -0.62 24.36 16 3 H 0.43 -29.33 6.61 -89.70 -0.59 -29.92 16 4 C -0.05 3.04 9.17 127.69 1.17 4.21 16 5 C 0.00 -0.11 4.11 86.30 0.36 0.25 16 6 C -0.11 5.85 2.10 -10.79 -0.02 5.82 16 7 H 0.11 -6.05 6.33 -2.39 -0.02 -6.06 16 8 C -0.12 5.91 4.81 30.59 0.15 6.06 16 9 C -0.13 4.50 5.60 30.59 0.17 4.67 16 10 C 0.14 -4.15 2.78 44.99 0.13 -4.02 16 11 H 0.05 -0.88 7.58 -2.39 -0.02 -0.89 16 12 N -0.70 21.27 4.23 -442.54 -1.87 19.40 16 13 C 0.51 -9.68 7.87 87.66 0.69 -8.99 16 14 O -0.57 2.87 16.16 16.01 0.26 3.13 16 15 C 0.03 -0.70 5.22 71.24 0.37 -0.32 16 16 O -0.32 2.98 9.67 -73.38 -0.71 2.27 16 17 C 0.12 -1.13 6.69 22.51 0.15 -0.98 16 18 C -0.15 0.66 9.55 22.36 0.21 0.88 16 19 C -0.05 0.29 5.42 -19.88 -0.11 0.18 16 20 C -0.09 0.84 2.81 71.23 0.20 1.04 16 21 O -0.57 4.63 12.74 -148.98 -1.90 2.73 16 22 Si 0.78 -9.24 29.79 68.60 2.04 -7.20 16 23 C -0.18 1.41 8.67 22.28 0.19 1.61 16 24 C -0.07 0.97 10.04 22.26 0.22 1.19 16 25 C -0.20 3.15 9.04 22.37 0.20 3.35 16 26 C -0.12 4.63 5.61 30.59 0.17 4.80 16 27 C -0.11 5.30 5.03 30.59 0.15 5.45 16 28 H 0.13 -7.98 7.98 -2.39 -0.02 -8.00 16 29 H 0.12 -7.86 8.06 -2.39 -0.02 -7.87 16 30 H 0.12 -7.50 6.52 -2.39 -0.02 -7.52 16 31 H 0.13 -8.13 8.10 -2.39 -0.02 -8.15 16 32 H 0.12 -7.83 8.10 -2.38 -0.02 -7.85 16 33 H 0.12 -7.88 8.14 -2.39 -0.02 -7.90 16 34 H 0.15 -9.42 7.99 -2.39 -0.02 -9.44 16 35 H 0.14 -9.36 8.07 -2.39 -0.02 -9.38 16 36 H 0.09 -4.72 6.62 -2.38 -0.02 -4.73 16 37 H 0.08 -3.78 7.60 -2.38 -0.02 -3.79 16 38 H 0.08 -2.91 8.14 -2.38 -0.02 -2.93 16 39 H 0.04 -0.88 8.14 -2.39 -0.02 -0.90 16 40 H 0.42 -16.54 6.87 -92.71 -0.64 -17.18 16 41 H 0.13 -4.12 7.65 -2.39 -0.02 -4.14 16 42 H 0.12 -3.31 7.67 -2.39 -0.02 -3.33 16 43 H 0.12 -0.30 8.06 -2.91 -0.02 -0.32 16 44 H 0.09 -1.18 7.96 -2.39 -0.02 -1.20 16 45 H 0.40 -7.50 8.74 -74.06 -0.65 -8.15 16 46 H -0.28 2.17 7.11 99.48 0.71 2.88 16 47 H -0.30 1.31 7.11 99.48 0.71 2.02 16 48 H 0.12 -0.94 4.87 -2.91 -0.01 -0.96 16 49 H 0.16 -3.14 8.06 -2.91 -0.02 -3.17 16 50 H 0.17 -4.52 6.30 -2.91 -0.02 -4.54 16 51 H 0.06 -2.10 8.14 -2.39 -0.02 -2.12 16 52 H 0.09 -3.24 8.14 -2.39 -0.02 -3.25 16 53 H 0.08 -3.96 6.51 -2.39 -0.02 -3.97 16 54 H 0.09 -4.49 8.14 -2.38 -0.02 -4.51 16 Total: 1.00 -94.55 411.97 1.81 -92.74 By element: Atomic # 1 Polarization: -166.34 SS G_CDS: -0.93 Total: -167.27 kcal Atomic # 6 Polarization: 24.30 SS G_CDS: 5.54 Total: 29.85 kcal Atomic # 7 Polarization: 46.26 SS G_CDS: -2.50 Total: 43.76 kcal Atomic # 8 Polarization: 10.48 SS G_CDS: -2.35 Total: 8.13 kcal Atomic # 14 Polarization: -9.24 SS G_CDS: 2.04 Total: -7.20 kcal Total: -94.55 1.81 -92.74 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17509652_4860298.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 117.775 kcal (2) G-P(sol) polarization free energy of solvation -94.549 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.225 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.813 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -92.736 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.039 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds