Wall clock time and date at job start Sun Mar 7 2021 08:01:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.36550 * 126.64031 * 2 1 4 4 C 1.46655 * 125.98935 * 0.02562 * 3 2 1 5 5 O 1.21689 * 120.00402 * 0.02562 * 4 3 2 6 6 N 1.34777 * 119.99732 * 179.97438 * 4 3 2 7 7 C 1.46497 * 120.00015 * 179.97438 * 6 4 3 8 8 H 1.08991 * 112.85292 * 334.67649 * 7 6 4 9 9 C 1.53792 * 113.61076 * 105.86624 * 7 6 4 10 10 C 1.53951 * 87.01640 * 139.95253 * 9 7 6 11 11 H 1.09005 * 113.53990 * 89.19060 * 10 9 7 12 12 Br 1.96599 * 113.74467 * 220.05350 * 10 9 7 13 13 C 1.53774 * 87.11692 * 334.63742 * 10 9 7 14 14 O 1.34919 * 108.01909 * 180.02562 * 3 2 1 15 15 C 1.33925 * 109.38706 * 359.97438 * 14 3 2 16 16 C 1.50703 * 125.61743 * 180.02562 * 15 14 3 17 17 O 1.42904 * 109.47020 * 270.02521 * 16 15 14 18 18 C 1.35895 * 116.99866 * 179.97438 * 17 16 15 19 19 C 1.38735 * 120.05190 * 180.02562 * 18 17 16 20 20 C 1.38147 * 119.94129 * 179.97438 * 19 18 17 21 21 C 1.38267 * 120.05789 * 359.97438 * 20 19 18 22 22 C 1.50699 * 119.94534 * 179.97438 * 21 20 19 23 23 O 1.42895 * 109.47158 * 299.99634 * 22 21 20 24 24 Si 1.86300 * 109.46944 * 180.02562 * 22 21 20 25 25 C 1.38271 * 120.10847 * 0.27231 * 21 20 19 26 26 C 1.38146 * 120.05540 * 359.45178 * 25 21 20 27 27 C 1.35132 * 108.76605 * 0.26859 * 15 14 3 28 28 H 1.09003 * 109.47689 * 90.00227 * 1 2 3 29 29 H 1.09005 * 109.47449 * 210.00076 * 1 2 3 30 30 H 1.09003 * 109.47273 * 329.99971 * 1 2 3 31 31 H 0.96999 * 120.00057 * 0.02562 * 6 4 3 32 32 H 1.08999 * 113.61498 * 254.53191 * 9 7 6 33 33 H 1.08998 * 113.61047 * 25.43537 * 9 7 6 34 34 H 1.08998 * 113.61975 * 270.81449 * 13 10 9 35 35 H 1.09001 * 113.69184 * 139.91572 * 13 10 9 36 36 H 1.08994 * 109.47190 * 150.03207 * 16 15 14 37 37 H 1.08999 * 109.46790 * 30.02264 * 16 15 14 38 38 H 1.07993 * 120.03328 * 359.95220 * 19 18 17 39 39 H 1.07996 * 119.97399 * 179.97438 * 20 19 18 40 40 H 1.09000 * 109.47247 * 60.00087 * 22 21 20 41 41 H 0.96698 * 114.00355 * 300.00487 * 23 22 21 42 42 H 1.48506 * 110.00048 * 180.02562 * 24 22 21 43 43 H 1.48502 * 109.99996 * 301.31619 * 24 22 21 44 44 H 1.08003 * 119.96738 * 179.72707 * 25 21 20 45 45 H 1.08003 * 120.02766 * 180.26922 * 26 25 21 46 46 H 1.08002 * 126.43872 * 179.73503 * 27 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3219 1.0957 0.0000 4 6 1.8840 2.4953 0.0005 5 8 0.6966 2.7615 0.0015 6 7 2.7969 3.4869 0.0010 7 6 2.3596 4.8851 0.0010 8 1 1.3669 5.0181 -0.4290 9 6 2.5429 5.5879 1.3566 10 6 2.9969 6.8261 0.5624 11 1 2.1781 7.4908 0.2868 12 35 4.5113 7.7781 1.3779 13 6 3.4094 5.8590 -0.5597 14 8 3.6004 0.6649 -0.0006 15 6 3.6183 -0.6743 -0.0004 16 6 4.8551 -1.5355 -0.0003 17 8 5.2462 -1.8074 -1.3476 18 6 6.3521 -2.5768 -1.5256 19 6 6.7888 -2.8797 -2.8071 20 6 7.9137 -3.6616 -2.9854 21 6 8.6044 -4.1417 -1.8881 22 6 9.8308 -4.9949 -2.0855 23 8 9.4796 -6.1722 -2.8153 24 14 10.5249 -5.4781 -0.4255 25 6 8.1682 -3.8454 -0.6099 26 6 7.0473 -3.0592 -0.4262 27 6 2.3448 -1.1261 -0.0057 28 1 -0.3634 0.0000 -1.0277 29 1 -0.3634 -0.8900 0.5139 30 1 -0.3634 0.8900 0.5138 31 1 3.7434 3.2748 0.0006 32 1 1.6105 5.7352 1.9016 33 1 3.3295 5.1512 1.9718 34 1 4.4334 5.4966 -0.4693 35 1 3.1762 6.2238 -1.5601 36 1 4.6445 -2.4735 0.5131 37 1 5.6617 -1.0128 0.5138 38 1 6.2498 -2.5050 -3.6646 39 1 8.2539 -3.8981 -3.9827 40 1 10.5794 -4.4318 -2.6428 41 1 8.8162 -6.7230 -2.3776 42 1 11.7353 -6.3194 -0.6064 43 1 10.8645 -4.2622 0.3565 44 1 8.7070 -4.2253 0.2456 45 1 6.7095 -2.8244 0.5724 46 1 2.0307 -2.1594 -0.0109 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17509654_4549632.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:01:03 Heat of formation + Delta-G solvation = -28.575318 kcal Electronic energy + Delta-G solvation = -30503.998495 eV Core-core repulsion = 25988.706138 eV Total energy + Delta-G solvation = -4515.292358 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.061 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.93365 -41.39578 -41.12863 -39.37492 -39.23135 -37.24305 -35.48791 -34.55936 -33.24244 -32.13682 -31.58806 -31.11609 -28.91076 -28.44240 -27.09072 -26.30625 -25.42838 -24.09737 -22.82346 -22.44487 -22.28050 -21.38823 -20.59749 -19.57501 -19.18282 -18.38906 -17.79010 -17.51008 -17.44046 -17.03650 -16.76016 -16.63005 -16.17938 -16.00961 -15.77777 -15.66685 -15.41294 -14.79911 -14.72655 -14.37173 -14.30924 -14.19791 -14.05653 -13.96061 -13.83713 -13.82131 -13.71741 -13.63593 -13.43493 -13.04216 -12.80874 -12.28443 -12.24530 -12.20411 -12.09998 -11.82865 -11.78255 -11.24683 -10.87052 -10.84537 -10.79754 -10.47179 -10.32829 -10.12147 -9.70470 -9.30006 -5.09368 -0.23483 0.21150 0.22653 0.58128 0.95491 1.25438 1.34544 1.57423 1.93087 1.95353 2.01056 2.28909 2.58766 3.00139 3.05958 3.21966 3.42291 3.42790 3.56222 3.58222 3.60126 3.63223 3.69454 3.80380 3.85346 3.89555 4.19987 4.21861 4.28318 4.33170 4.36319 4.38550 4.42894 4.45449 4.55733 4.58626 4.60966 4.68317 4.75902 4.82363 4.87464 4.95048 5.07509 5.07822 5.17305 5.20832 5.38614 5.43260 5.60713 5.67814 6.18305 6.26271 6.54208 6.90687 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 C -0.081 4.081 3 C -0.077 4.077 4 C 0.609 3.391 5 O -0.510 6.510 6 N -0.710 5.710 7 C 0.126 3.874 8 H 0.126 0.874 9 C -0.141 4.141 10 C -0.072 4.072 11 H 0.130 0.870 12 Br -0.146 7.146 13 C -0.135 4.135 14 O -0.156 6.156 15 C 0.013 3.987 16 C 0.139 3.861 17 O -0.308 6.308 18 C 0.134 3.866 19 C -0.147 4.147 20 C -0.051 4.051 21 C -0.156 4.156 22 C -0.064 4.064 23 O -0.541 6.541 24 Si 0.686 3.314 25 C -0.075 4.075 26 C -0.204 4.204 27 C -0.183 4.183 28 H 0.078 0.922 29 H 0.071 0.929 30 H 0.088 0.912 31 H 0.408 0.592 32 H 0.090 0.910 33 H 0.100 0.900 34 H 0.101 0.899 35 H 0.093 0.907 36 H 0.103 0.897 37 H 0.086 0.914 38 H 0.134 0.866 39 H 0.135 0.865 40 H 0.113 0.887 41 H 0.379 0.621 42 H -0.255 1.255 43 H -0.259 1.259 44 H 0.130 0.870 45 H 0.133 0.867 46 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.559 -2.821 1.941 3.469 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.084 4.084 3 C -0.129 4.129 4 C 0.396 3.604 5 O -0.387 6.387 6 N -0.360 5.360 7 C 0.020 3.980 8 H 0.144 0.856 9 C -0.180 4.180 10 C -0.168 4.168 11 H 0.148 0.852 12 Br -0.065 7.065 13 C -0.174 4.174 14 O -0.052 6.052 15 C -0.039 4.039 16 C 0.064 3.936 17 O -0.222 6.222 18 C 0.090 3.910 19 C -0.165 4.165 20 C -0.069 4.069 21 C -0.156 4.156 22 C -0.175 4.175 23 O -0.346 6.346 24 Si 0.589 3.411 25 C -0.093 4.093 26 C -0.223 4.223 27 C -0.202 4.202 28 H 0.096 0.904 29 H 0.090 0.910 30 H 0.107 0.893 31 H 0.244 0.756 32 H 0.108 0.892 33 H 0.118 0.882 34 H 0.120 0.880 35 H 0.111 0.889 36 H 0.121 0.879 37 H 0.104 0.896 38 H 0.152 0.848 39 H 0.152 0.848 40 H 0.131 0.869 41 H 0.226 0.774 42 H -0.180 1.180 43 H -0.184 1.184 44 H 0.147 0.853 45 H 0.151 0.849 46 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 0.355 -1.706 2.208 2.813 hybrid contribution 0.187 0.102 -0.422 0.473 sum 0.542 -1.603 1.786 2.461 Atomic orbital electron populations 1.20487 0.87629 1.04001 1.03325 1.20696 0.97958 0.90671 0.99038 1.21818 0.81225 0.94755 1.15109 1.16499 0.85750 0.81766 0.76408 1.90881 1.15564 1.82198 1.50076 1.45818 1.10024 1.05461 1.74726 1.22512 1.00015 0.78731 0.96747 0.85605 1.23788 1.03501 0.93232 0.97525 1.25942 0.95389 0.96614 0.98900 0.85217 1.97459 1.45858 1.79305 1.83923 1.23625 1.00493 0.94430 0.98851 1.83971 1.28473 1.21822 1.70962 1.21915 0.95974 0.80599 1.05431 1.20954 0.92042 0.97169 0.83402 1.86152 1.42062 1.66254 1.27736 1.18983 0.86297 0.91423 0.94343 1.20529 0.98713 1.02319 0.94945 1.20859 0.93025 0.93892 0.99159 1.20270 0.99373 1.02558 0.93425 1.24976 0.97301 0.87396 1.07786 1.86502 1.63807 1.34535 1.49777 0.94813 0.84446 0.83991 0.77883 1.20806 0.95500 0.96780 0.96205 1.21190 0.98939 1.04015 0.98163 1.21617 0.91102 1.00662 1.06806 0.90380 0.91001 0.89313 0.75620 0.89166 0.88188 0.88041 0.88884 0.87907 0.89572 0.84770 0.84751 0.86948 0.77366 1.17969 1.18366 0.85258 0.84927 0.82001 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.06 9.82 36.00 0.35 0.29 16 2 C -0.08 -0.13 6.20 -104.44 -0.65 -0.78 16 3 C -0.08 -0.15 7.13 -36.80 -0.26 -0.41 16 4 C 0.61 1.22 7.79 -12.86 -0.10 1.12 16 5 O -0.51 -2.23 14.35 5.20 0.07 -2.15 16 6 N -0.71 0.51 5.36 -54.33 -0.29 0.22 16 7 C 0.13 -0.21 4.21 -67.11 -0.28 -0.50 16 8 H 0.13 -0.12 7.50 -51.93 -0.39 -0.51 16 9 C -0.14 0.27 7.53 -25.82 -0.19 0.08 16 10 C -0.07 0.15 4.87 -25.83 -0.13 0.03 16 11 H 0.13 -0.41 8.14 -51.93 -0.42 -0.83 16 12 Br -0.15 -0.06 33.82 -68.01 -2.30 -2.36 16 13 C -0.14 0.38 7.46 -25.92 -0.19 0.19 16 14 O -0.16 -0.19 10.40 5.00 0.05 -0.14 16 15 C 0.01 0.00 6.94 -35.41 -0.25 -0.24 16 16 C 0.14 -0.27 5.27 36.01 0.19 -0.08 16 17 O -0.31 -0.19 10.12 -19.41 -0.20 -0.39 16 18 C 0.13 0.04 6.69 -39.22 -0.26 -0.23 16 19 C -0.15 -0.06 9.99 -39.43 -0.39 -0.45 16 20 C -0.05 0.00 9.60 -39.60 -0.38 -0.38 16 21 C -0.16 0.08 5.39 -104.60 -0.56 -0.49 16 22 C -0.06 0.05 2.82 36.01 0.10 0.15 16 23 O -0.54 0.13 12.76 -35.23 -0.45 -0.32 16 24 Si 0.69 -1.07 29.78 -169.99 -5.06 -6.14 16 25 C -0.08 0.10 8.66 -39.60 -0.34 -0.25 16 26 C -0.20 0.25 9.04 -39.43 -0.36 -0.10 16 27 C -0.18 -0.03 10.73 -39.89 -0.43 -0.46 16 28 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 29 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.09 0.17 6.44 -51.93 -0.33 -0.16 16 31 H 0.41 -0.89 8.47 -40.82 -0.35 -1.24 16 32 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 33 H 0.10 -0.16 8.12 -51.93 -0.42 -0.58 16 34 H 0.10 -0.30 8.09 -51.93 -0.42 -0.72 16 35 H 0.09 -0.31 8.14 -51.93 -0.42 -0.74 16 36 H 0.10 -0.45 7.66 -51.93 -0.40 -0.84 16 37 H 0.09 -0.28 7.66 -51.93 -0.40 -0.68 16 38 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 39 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 40 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 41 H 0.38 -1.55 8.70 45.56 0.40 -1.15 16 42 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 43 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 44 H 0.13 -0.40 4.87 -52.48 -0.26 -0.66 16 45 H 0.13 -0.48 6.30 -52.48 -0.33 -0.81 16 46 H 0.16 -0.33 8.06 -52.49 -0.42 -0.76 16 LS Contribution 407.61 15.07 6.14 6.14 Total: 0.00 -7.99 407.61 -12.06 -20.04 By element: Atomic # 1 Polarization: -6.52 SS G_CDS: -5.89 Total: -12.41 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: -4.14 Total: -2.50 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: -0.29 Total: 0.22 kcal Atomic # 8 Polarization: -2.48 SS G_CDS: -0.52 Total: -3.00 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.06 Total: -6.14 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -2.30 Total: -2.36 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -7.99 -12.06 -20.04 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17509654_4549632.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.530 kcal (2) G-P(sol) polarization free energy of solvation -7.988 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.519 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.045 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.575 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds