Wall clock time and date at job start Sun Mar 7 2021 08:01:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.36550 * 126.64031 * 2 1 4 4 C 1.46655 * 125.98935 * 0.02562 * 3 2 1 5 5 O 1.21689 * 120.00402 * 0.02562 * 4 3 2 6 6 N 1.34777 * 119.99732 * 179.97438 * 4 3 2 7 7 C 1.46497 * 120.00015 * 179.97438 * 6 4 3 8 8 H 1.08991 * 112.85292 * 334.67649 * 7 6 4 9 9 C 1.53792 * 113.61076 * 105.86624 * 7 6 4 10 10 C 1.53951 * 87.01640 * 139.95253 * 9 7 6 11 11 H 1.09005 * 113.53990 * 89.19060 * 10 9 7 12 12 Br 1.96599 * 113.74467 * 220.05350 * 10 9 7 13 13 C 1.53774 * 87.11692 * 334.63742 * 10 9 7 14 14 O 1.34919 * 108.01909 * 180.02562 * 3 2 1 15 15 C 1.33925 * 109.38706 * 359.97438 * 14 3 2 16 16 C 1.50703 * 125.61743 * 180.02562 * 15 14 3 17 17 O 1.42904 * 109.47020 * 270.02521 * 16 15 14 18 18 C 1.35895 * 116.99866 * 179.97438 * 17 16 15 19 19 C 1.38735 * 120.05190 * 180.02562 * 18 17 16 20 20 C 1.38147 * 119.94129 * 179.97438 * 19 18 17 21 21 C 1.38267 * 120.05789 * 359.97438 * 20 19 18 22 22 C 1.50699 * 119.94534 * 179.97438 * 21 20 19 23 23 O 1.42895 * 109.47158 * 299.99634 * 22 21 20 24 24 Si 1.86300 * 109.46944 * 180.02562 * 22 21 20 25 25 C 1.38271 * 120.10847 * 0.27231 * 21 20 19 26 26 C 1.38146 * 120.05540 * 359.45178 * 25 21 20 27 27 C 1.35132 * 108.76605 * 0.26859 * 15 14 3 28 28 H 1.09003 * 109.47689 * 90.00227 * 1 2 3 29 29 H 1.09005 * 109.47449 * 210.00076 * 1 2 3 30 30 H 1.09003 * 109.47273 * 329.99971 * 1 2 3 31 31 H 0.96999 * 120.00057 * 0.02562 * 6 4 3 32 32 H 1.08999 * 113.61498 * 254.53191 * 9 7 6 33 33 H 1.08998 * 113.61047 * 25.43537 * 9 7 6 34 34 H 1.08998 * 113.61975 * 270.81449 * 13 10 9 35 35 H 1.09001 * 113.69184 * 139.91572 * 13 10 9 36 36 H 1.08994 * 109.47190 * 150.03207 * 16 15 14 37 37 H 1.08999 * 109.46790 * 30.02264 * 16 15 14 38 38 H 1.07993 * 120.03328 * 359.95220 * 19 18 17 39 39 H 1.07996 * 119.97399 * 179.97438 * 20 19 18 40 40 H 1.09000 * 109.47247 * 60.00087 * 22 21 20 41 41 H 0.96698 * 114.00355 * 300.00487 * 23 22 21 42 42 H 1.48506 * 110.00048 * 180.02562 * 24 22 21 43 43 H 1.48502 * 109.99996 * 301.31619 * 24 22 21 44 44 H 1.08003 * 119.96738 * 179.72707 * 25 21 20 45 45 H 1.08003 * 120.02766 * 180.26922 * 26 25 21 46 46 H 1.08002 * 126.43872 * 179.73503 * 27 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3219 1.0957 0.0000 4 6 1.8840 2.4953 0.0005 5 8 0.6966 2.7615 0.0015 6 7 2.7969 3.4869 0.0010 7 6 2.3596 4.8851 0.0010 8 1 1.3669 5.0181 -0.4290 9 6 2.5429 5.5879 1.3566 10 6 2.9969 6.8261 0.5624 11 1 2.1781 7.4908 0.2868 12 35 4.5113 7.7781 1.3779 13 6 3.4094 5.8590 -0.5597 14 8 3.6004 0.6649 -0.0006 15 6 3.6183 -0.6743 -0.0004 16 6 4.8551 -1.5355 -0.0003 17 8 5.2462 -1.8074 -1.3476 18 6 6.3521 -2.5768 -1.5256 19 6 6.7888 -2.8797 -2.8071 20 6 7.9137 -3.6616 -2.9854 21 6 8.6044 -4.1417 -1.8881 22 6 9.8308 -4.9949 -2.0855 23 8 9.4796 -6.1722 -2.8153 24 14 10.5249 -5.4781 -0.4255 25 6 8.1682 -3.8454 -0.6099 26 6 7.0473 -3.0592 -0.4262 27 6 2.3448 -1.1261 -0.0057 28 1 -0.3634 0.0000 -1.0277 29 1 -0.3634 -0.8900 0.5139 30 1 -0.3634 0.8900 0.5138 31 1 3.7434 3.2748 0.0006 32 1 1.6105 5.7352 1.9016 33 1 3.3295 5.1512 1.9718 34 1 4.4334 5.4966 -0.4693 35 1 3.1762 6.2238 -1.5601 36 1 4.6445 -2.4735 0.5131 37 1 5.6617 -1.0128 0.5138 38 1 6.2498 -2.5050 -3.6646 39 1 8.2539 -3.8981 -3.9827 40 1 10.5794 -4.4318 -2.6428 41 1 8.8162 -6.7230 -2.3776 42 1 11.7353 -6.3194 -0.6064 43 1 10.8645 -4.2622 0.3565 44 1 8.7070 -4.2253 0.2456 45 1 6.7095 -2.8244 0.5724 46 1 2.0307 -2.1594 -0.0109 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17509654_4549632.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:01:01 Heat of formation + Delta-G solvation = -25.308259 kcal Electronic energy + Delta-G solvation = -30503.856825 eV Core-core repulsion = 25988.706138 eV Total energy + Delta-G solvation = -4515.150687 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.061 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -43.94918 -41.31867 -41.12300 -39.34812 -39.18795 -37.17372 -35.50535 -34.60989 -33.17279 -32.05604 -31.51923 -31.05206 -28.92014 -28.39490 -26.93654 -26.23629 -25.35576 -24.01875 -22.80535 -22.44327 -22.22020 -21.32816 -20.56525 -19.47074 -19.19074 -18.32332 -17.77953 -17.54036 -17.38179 -16.91329 -16.67402 -16.52872 -16.15876 -15.96674 -15.79427 -15.63988 -15.37541 -14.76365 -14.64370 -14.34646 -14.27330 -14.17535 -14.06938 -13.88731 -13.81707 -13.67282 -13.60472 -13.58459 -13.40351 -12.97106 -12.79914 -12.22680 -12.18421 -12.07043 -12.04767 -11.72461 -11.72262 -11.35984 -10.83483 -10.81262 -10.79525 -10.40498 -10.34730 -10.03510 -9.72946 -9.22451 -4.99177 -0.28467 0.28168 0.31626 0.68210 0.95683 1.34361 1.35259 1.64150 1.90755 1.98714 1.99259 2.37377 2.66723 3.13289 3.19637 3.29799 3.54527 3.56815 3.63317 3.65937 3.71883 3.76540 3.81738 3.95822 4.02165 4.09357 4.28918 4.31763 4.34509 4.43803 4.46382 4.48237 4.51271 4.54893 4.60482 4.68767 4.72221 4.74335 4.83235 4.88911 4.96729 4.98425 5.08229 5.16459 5.25619 5.26453 5.37372 5.51098 5.66613 5.70127 6.26141 6.29100 6.80537 6.85285 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C -0.094 4.094 3 C -0.096 4.096 4 C 0.606 3.394 5 O -0.542 6.542 6 N -0.698 5.698 7 C 0.123 3.877 8 H 0.119 0.881 9 C -0.138 4.138 10 C -0.064 4.064 11 H 0.142 0.858 12 Br -0.170 7.170 13 C -0.126 4.126 14 O -0.161 6.161 15 C 0.011 3.989 16 C 0.135 3.865 17 O -0.327 6.327 18 C 0.125 3.875 19 C -0.162 4.162 20 C -0.061 4.061 21 C -0.161 4.161 22 C -0.071 4.071 23 O -0.558 6.558 24 Si 0.778 3.222 25 C -0.078 4.078 26 C -0.201 4.201 27 C -0.186 4.186 28 H 0.077 0.923 29 H 0.089 0.911 30 H 0.072 0.928 31 H 0.416 0.584 32 H 0.089 0.911 33 H 0.098 0.902 34 H 0.105 0.895 35 H 0.103 0.897 36 H 0.133 0.867 37 H 0.102 0.898 38 H 0.131 0.869 39 H 0.133 0.867 40 H 0.103 0.897 41 H 0.395 0.605 42 H -0.304 1.304 43 H -0.283 1.283 44 H 0.150 0.850 45 H 0.160 0.840 46 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.346 -3.543 2.777 4.515 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.097 4.097 3 C -0.148 4.148 4 C 0.393 3.607 5 O -0.422 6.422 6 N -0.349 5.349 7 C 0.018 3.982 8 H 0.137 0.863 9 C -0.177 4.177 10 C -0.160 4.160 11 H 0.160 0.840 12 Br -0.090 7.090 13 C -0.164 4.164 14 O -0.058 6.058 15 C -0.041 4.041 16 C 0.061 3.939 17 O -0.241 6.241 18 C 0.080 3.920 19 C -0.181 4.181 20 C -0.079 4.079 21 C -0.161 4.161 22 C -0.181 4.181 23 O -0.366 6.366 24 Si 0.685 3.315 25 C -0.095 4.095 26 C -0.219 4.219 27 C -0.205 4.205 28 H 0.095 0.905 29 H 0.108 0.892 30 H 0.091 0.909 31 H 0.253 0.747 32 H 0.107 0.893 33 H 0.116 0.884 34 H 0.123 0.877 35 H 0.121 0.879 36 H 0.150 0.850 37 H 0.120 0.880 38 H 0.149 0.851 39 H 0.151 0.849 40 H 0.121 0.879 41 H 0.245 0.755 42 H -0.233 1.233 43 H -0.210 1.210 44 H 0.167 0.833 45 H 0.178 0.822 46 H 0.201 0.799 Dipole moment (debyes) X Y Z Total from point charges 0.560 -2.418 3.036 3.921 hybrid contribution 0.150 0.290 -0.716 0.787 sum 0.710 -2.128 2.320 3.227 Atomic orbital electron populations 1.20461 0.87383 1.04040 1.03276 1.20986 0.98463 0.91308 0.98932 1.21863 0.81719 0.94922 1.16321 1.16609 0.85628 0.82288 0.76190 1.90857 1.16744 1.82704 1.51848 1.45785 1.10102 1.05462 1.73525 1.22547 1.00167 0.78332 0.97201 0.86294 1.23757 1.03387 0.93253 0.97342 1.26036 0.94737 0.96480 0.98780 0.84006 1.97458 1.47271 1.79836 1.84404 1.23600 1.00244 0.93476 0.99103 1.83959 1.28092 1.22631 1.71109 1.22421 0.96990 0.80269 1.04428 1.21268 0.91649 0.98246 0.82712 1.86108 1.42293 1.66483 1.29245 1.19082 0.86517 0.91726 0.94655 1.20625 0.99115 1.02918 0.95436 1.20911 0.93253 0.94293 0.99486 1.20342 0.99343 1.02637 0.93789 1.25128 0.97238 0.87372 1.08383 1.86462 1.64588 1.34904 1.50663 0.93785 0.81671 0.80436 0.75600 1.21050 0.95581 0.96496 0.96369 1.21484 0.98391 1.03088 0.98973 1.21901 0.90856 1.01297 1.06468 0.90451 0.89243 0.90928 0.74732 0.89270 0.88368 0.87655 0.87864 0.84993 0.88040 0.85075 0.84914 0.87947 0.75495 1.23280 1.21038 0.83295 0.82217 0.79857 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.20 9.82 71.23 0.70 0.50 16 2 C -0.09 -0.34 6.20 -19.74 -0.12 -0.46 16 3 C -0.10 -0.46 7.13 24.07 0.17 -0.28 16 4 C 0.61 3.16 7.79 86.44 0.67 3.84 16 5 O -0.54 -5.66 14.35 -4.31 -0.06 -5.72 16 6 N -0.70 0.54 5.36 -444.02 -2.38 -1.84 16 7 C 0.12 -0.37 4.21 45.52 0.19 -0.18 16 8 H 0.12 -0.14 7.50 -2.39 -0.02 -0.15 16 9 C -0.14 0.50 7.53 31.18 0.23 0.74 16 10 C -0.06 0.29 4.87 31.18 0.15 0.44 16 11 H 0.14 -0.96 8.14 -2.38 -0.02 -0.98 16 12 Br -0.17 -0.15 33.82 -20.37 -0.69 -0.83 16 13 C -0.13 0.75 7.46 31.12 0.23 0.98 16 14 O -0.16 -0.42 10.40 -5.04 -0.05 -0.48 16 15 C 0.01 0.00 6.94 24.97 0.17 0.17 16 16 C 0.14 -0.75 5.27 71.24 0.38 -0.37 16 17 O -0.33 -0.16 10.12 -92.36 -0.93 -1.09 16 18 C 0.13 -0.02 6.69 22.51 0.15 0.13 16 19 C -0.16 -0.20 9.99 22.37 0.22 0.02 16 20 C -0.06 -0.03 9.60 22.25 0.21 0.18 16 21 C -0.16 0.22 5.39 -19.85 -0.11 0.11 16 22 C -0.07 0.11 2.82 71.24 0.20 0.31 16 23 O -0.56 0.30 12.76 -148.98 -1.90 -1.60 16 24 Si 0.78 -2.85 29.78 68.60 2.04 -0.80 16 25 C -0.08 0.32 8.66 22.26 0.19 0.51 16 26 C -0.20 0.87 9.04 22.37 0.20 1.07 16 27 C -0.19 0.06 10.73 22.07 0.24 0.30 16 28 H 0.08 0.14 8.14 -2.39 -0.02 0.12 16 29 H 0.09 -0.19 8.14 -2.38 -0.02 -0.21 16 30 H 0.07 0.40 6.44 -2.39 -0.02 0.39 16 31 H 0.42 -1.67 8.47 -92.71 -0.78 -2.45 16 32 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 33 H 0.10 -0.29 8.12 -2.39 -0.02 -0.31 16 34 H 0.11 -0.67 8.09 -2.39 -0.02 -0.69 16 35 H 0.10 -0.77 8.14 -2.39 -0.02 -0.79 16 36 H 0.13 -1.52 7.66 -2.39 -0.02 -1.54 16 37 H 0.10 -0.87 7.66 -2.39 -0.02 -0.89 16 38 H 0.13 0.10 8.06 -2.91 -0.02 0.08 16 39 H 0.13 -0.01 8.06 -2.91 -0.02 -0.04 16 40 H 0.10 0.01 7.96 -2.39 -0.02 -0.01 16 41 H 0.40 -3.44 8.70 -74.06 -0.64 -4.09 16 42 H -0.30 -1.41 7.11 99.48 0.71 -0.70 16 43 H -0.28 -0.14 7.11 99.48 0.71 0.57 16 44 H 0.15 -1.27 4.87 -2.91 -0.01 -1.29 16 45 H 0.16 -1.66 6.30 -2.91 -0.02 -1.68 16 46 H 0.18 -1.04 8.06 -2.91 -0.02 -1.06 16 Total: 0.00 -20.16 407.61 -0.22 -20.38 By element: Atomic # 1 Polarization: -15.68 SS G_CDS: -0.34 Total: -16.02 kcal Atomic # 6 Polarization: 3.91 SS G_CDS: 4.09 Total: 8.01 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -2.38 Total: -1.84 kcal Atomic # 8 Polarization: -5.94 SS G_CDS: -2.95 Total: -8.89 kcal Atomic # 14 Polarization: -2.85 SS G_CDS: 2.04 Total: -0.80 kcal Atomic # 35 Polarization: -0.15 SS G_CDS: -0.69 Total: -0.83 kcal Total: -20.16 -0.22 -20.38 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17509654_4549632.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.926 kcal (2) G-P(sol) polarization free energy of solvation -20.158 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.084 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.224 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.382 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.308 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds