Wall clock time and date at job start Sun Mar 7 2021 08:01:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35979 * 116.99841 * 2 1 4 4 C 1.38686 * 119.99795 * 180.02562 * 3 2 1 5 5 C 1.38153 * 119.99920 * 179.97438 * 4 3 2 6 6 C 1.50698 * 119.99660 * 180.02562 * 5 4 3 7 7 O 1.42900 * 109.46964 * 105.00222 * 6 5 4 8 8 Si 1.86293 * 109.47319 * 345.00169 * 6 5 4 9 9 C 1.38678 * 119.99937 * 359.76967 * 5 4 3 10 10 O 1.35980 * 119.99753 * 180.23788 * 9 5 4 11 11 C 1.42902 * 116.99994 * 180.25107 * 10 9 5 12 12 C 1.50700 * 109.47418 * 179.97438 * 11 10 9 13 13 O 1.21281 * 119.99554 * 359.97438 * 12 11 10 14 14 N 1.34776 * 119.99941 * 179.97438 * 12 11 10 15 15 C 1.46498 * 119.99883 * 179.97438 * 14 12 11 16 16 H 1.09006 * 112.84832 * 25.33494 * 15 14 12 17 17 C 1.53782 * 113.61480 * 156.53211 * 15 14 12 18 18 C 1.53778 * 87.08284 * 139.98648 * 17 15 14 19 19 H 1.08997 * 113.61766 * 89.19709 * 18 17 15 20 20 Br 1.96600 * 113.61239 * 220.02083 * 18 17 15 21 21 C 1.53783 * 113.62009 * 254.13938 * 15 14 12 22 22 C 1.38717 * 120.00102 * 0.48328 * 9 5 4 23 23 C 1.38118 * 119.99870 * 359.49269 * 22 9 5 24 24 H 1.09001 * 109.47122 * 180.02562 * 1 2 3 25 25 H 1.08997 * 109.46869 * 300.00382 * 1 2 3 26 26 H 1.09002 * 109.47158 * 59.99687 * 1 2 3 27 27 H 1.08001 * 119.99705 * 359.97438 * 4 3 2 28 28 H 1.08996 * 109.46931 * 224.99628 * 6 5 4 29 29 H 0.96701 * 113.99719 * 300.00019 * 7 6 5 30 30 H 1.48499 * 109.99880 * 180.02562 * 8 6 5 31 31 H 1.48502 * 109.99817 * 301.31518 * 8 6 5 32 32 H 1.09003 * 109.46677 * 299.99594 * 11 10 9 33 33 H 1.09000 * 109.47111 * 59.98887 * 11 10 9 34 34 H 0.97003 * 120.00313 * 0.02562 * 14 12 11 35 35 H 1.09008 * 113.60909 * 254.53370 * 17 15 14 36 36 H 1.08993 * 113.61329 * 25.34525 * 17 15 14 37 37 H 1.09007 * 113.60851 * 334.57088 * 21 15 14 38 38 H 1.09002 * 113.61150 * 105.46721 * 21 15 14 39 39 H 1.08002 * 120.00341 * 179.77596 * 22 9 5 40 40 H 1.07999 * 120.00024 * 180.25004 * 23 22 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4313 1.2842 -0.0005 5 6 4.0585 2.5151 -0.0011 6 6 5.5634 2.5939 -0.0022 7 8 6.0198 2.9670 -1.3040 8 14 6.2727 0.9322 0.4518 9 6 3.3032 3.6782 -0.0059 10 8 3.9206 4.8897 -0.0113 11 6 3.0807 6.0459 -0.0105 12 6 3.9348 7.2874 -0.0164 13 8 5.1438 7.1915 -0.0203 14 7 3.3552 8.5041 -0.0172 15 6 4.1856 9.7110 -0.0223 16 1 5.1721 9.5442 -0.4548 17 6 3.4682 10.9500 -0.5839 18 6 4.1510 11.7551 0.5343 19 1 5.1281 12.1490 0.2546 20 35 2.9863 13.1116 1.3518 21 6 4.2217 10.4398 1.3314 22 6 1.9179 3.6056 -0.0001 23 6 1.2909 2.3750 0.0000 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5139 0.8899 26 1 -0.3633 0.5139 -0.8900 27 1 4.0195 0.3784 -0.0005 28 1 5.8888 3.3386 0.7241 29 1 5.7659 2.3480 -2.0022 30 1 7.7562 0.9968 0.4548 31 1 5.7801 0.5184 1.7903 32 1 2.4478 6.0357 -0.8979 33 1 2.4550 6.0398 0.8820 34 1 2.3882 8.5808 -0.0137 35 1 3.7968 11.2282 -1.5853 36 1 2.3831 10.9054 -0.4916 37 1 3.3429 10.2561 1.9497 38 1 5.1576 10.3067 1.8740 39 1 1.3297 4.5114 -0.0002 40 1 0.2124 2.3185 0.0004 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17509654_4974302.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:01:23 Heat of formation + Delta-G solvation = -75.832713 kcal Electronic energy + Delta-G solvation = -25202.907888 eV Core-core repulsion = 21225.782336 eV Total energy + Delta-G solvation = -3977.125552 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.045 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.81137 -41.17307 -40.05144 -39.19540 -38.13941 -36.89129 -34.77078 -32.79973 -31.31873 -30.86357 -29.41956 -27.94763 -26.92010 -26.61968 -25.27833 -23.48529 -22.42220 -21.76179 -20.86124 -19.61230 -18.78618 -18.47026 -17.71294 -17.56961 -17.47918 -17.11988 -16.62676 -16.49037 -16.11446 -15.86435 -15.65287 -15.46817 -15.19117 -14.64662 -14.31119 -14.19473 -14.08143 -13.86965 -13.64921 -13.48504 -13.45810 -13.04084 -12.90994 -12.50497 -12.33607 -12.15259 -12.09147 -11.81593 -11.71337 -11.41340 -11.07280 -10.81072 -10.78853 -10.40600 -10.21588 -10.10738 -8.78960 -5.04070 0.07378 0.36636 0.67583 1.26896 1.38281 1.52146 1.62052 1.93398 2.36118 2.56391 2.61968 3.15053 3.21209 3.48222 3.52505 3.57963 3.72730 3.76596 3.78065 3.94283 4.06802 4.11132 4.14191 4.26604 4.36815 4.40659 4.45547 4.46992 4.50648 4.56510 4.69667 4.74535 4.80579 4.84775 4.96775 4.98765 5.15825 5.22971 5.36637 5.44340 6.17854 6.39129 6.47882 6.80568 7.07647 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.332 6.332 3 C 0.088 3.912 4 C -0.116 4.116 5 C -0.125 4.125 6 C -0.066 4.066 7 O -0.552 6.552 8 Si 0.782 3.218 9 C 0.098 3.902 10 O -0.312 6.312 11 C 0.035 3.965 12 C 0.514 3.486 13 O -0.569 6.569 14 N -0.698 5.698 15 C 0.124 3.876 16 H 0.104 0.896 17 C -0.120 4.120 18 C -0.067 4.067 19 H 0.135 0.865 20 Br -0.168 7.168 21 C -0.140 4.140 22 C -0.165 4.165 23 C -0.159 4.159 24 H 0.114 0.886 25 H 0.064 0.936 26 H 0.068 0.932 27 H 0.156 0.844 28 H 0.089 0.911 29 H 0.392 0.608 30 H -0.296 1.296 31 H -0.285 1.285 32 H 0.125 0.875 33 H 0.122 0.878 34 H 0.422 0.578 35 H 0.100 0.900 36 H 0.114 0.886 37 H 0.104 0.896 38 H 0.078 0.922 39 H 0.164 0.836 40 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.284 -1.500 -2.628 9.765 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.043 3.957 4 C -0.134 4.134 5 C -0.126 4.126 6 C -0.175 4.175 7 O -0.359 6.359 8 Si 0.687 3.313 9 C 0.052 3.948 10 O -0.225 6.225 11 C -0.043 4.043 12 C 0.301 3.699 13 O -0.446 6.446 14 N -0.352 5.352 15 C 0.018 3.982 16 H 0.122 0.878 17 C -0.158 4.158 18 C -0.163 4.163 19 H 0.153 0.847 20 Br -0.088 7.088 21 C -0.179 4.179 22 C -0.184 4.184 23 C -0.178 4.178 24 H 0.132 0.868 25 H 0.083 0.917 26 H 0.086 0.914 27 H 0.173 0.827 28 H 0.106 0.894 29 H 0.241 0.759 30 H -0.224 1.224 31 H -0.212 1.212 32 H 0.142 0.858 33 H 0.140 0.860 34 H 0.261 0.739 35 H 0.119 0.881 36 H 0.133 0.867 37 H 0.123 0.877 38 H 0.097 0.903 39 H 0.182 0.818 40 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -7.814 -1.192 -1.473 8.041 hybrid contribution -0.428 0.794 0.264 0.940 sum -8.242 -0.399 -1.209 8.340 Atomic orbital electron populations 1.23343 0.76478 1.05560 1.02314 1.86082 1.23291 1.26285 1.88996 1.18965 0.92049 0.85223 0.99486 1.20179 0.92309 0.96608 1.04264 1.19508 0.96253 0.90782 1.06045 1.25073 0.91951 1.11602 0.88900 1.86550 1.78321 1.54365 1.16675 0.93988 0.76439 0.77763 0.83142 1.18869 0.91574 0.84551 0.99770 1.86206 1.35227 1.11956 1.89106 1.22722 0.92684 0.82259 1.06637 1.20582 0.88347 0.85559 0.75437 1.90783 1.16796 1.87327 1.49724 1.45600 1.11229 1.03712 1.74686 1.22375 0.96317 0.82686 0.96839 0.87778 1.23583 1.01978 0.91529 0.98739 1.26033 0.99640 0.91555 0.99115 0.84706 1.97456 1.68030 1.58945 1.84345 1.23773 1.04535 0.92054 0.97548 1.21373 0.92085 1.00040 1.04856 1.21408 1.01544 0.90951 1.03891 0.86773 0.91728 0.91376 0.82674 0.89370 0.75912 1.22434 1.21157 0.85786 0.85999 0.73911 0.88137 0.86729 0.87731 0.90322 0.81847 0.82274 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.26 10.50 -93.31 -0.98 -1.24 16 3 C 0.09 0.11 6.69 22.49 0.15 0.26 16 4 C -0.12 -0.24 8.59 22.36 0.19 -0.05 16 5 C -0.12 -0.60 5.27 -19.78 -0.10 -0.70 16 6 C -0.07 -0.44 2.37 71.24 0.17 -0.27 16 7 O -0.55 -4.24 12.88 -148.98 -1.92 -6.15 16 8 Si 0.78 2.06 29.92 68.60 2.05 4.11 16 9 C 0.10 0.41 6.66 22.49 0.15 0.56 16 10 O -0.31 -2.24 9.00 -74.29 -0.67 -2.91 16 11 C 0.03 -0.09 5.22 71.24 0.37 0.28 16 12 C 0.51 1.38 7.91 87.66 0.69 2.07 16 13 O -0.57 -8.47 16.12 16.00 0.26 -8.21 16 14 N -0.70 3.64 5.36 -440.03 -2.36 1.28 16 15 C 0.12 -0.46 4.21 45.52 0.19 -0.27 16 16 H 0.10 0.09 7.50 -2.38 -0.02 0.07 16 17 C -0.12 0.92 7.46 31.12 0.23 1.15 16 18 C -0.07 0.32 4.88 31.18 0.15 0.47 16 19 H 0.13 -0.78 8.14 -2.39 -0.02 -0.80 16 20 Br -0.17 0.00 33.82 -20.37 -0.69 -0.69 16 21 C -0.14 0.53 7.53 31.18 0.23 0.77 16 22 C -0.17 0.35 9.03 22.36 0.20 0.55 16 23 C -0.16 0.38 9.03 22.36 0.20 0.58 16 24 H 0.11 -1.05 8.14 -2.39 -0.02 -1.07 16 25 H 0.06 -0.54 7.66 -2.39 -0.02 -0.56 16 26 H 0.07 -0.61 7.66 -2.39 -0.02 -0.63 16 27 H 0.16 -0.26 5.13 -2.91 -0.01 -0.27 16 28 H 0.09 1.02 7.83 -2.39 -0.02 1.01 16 29 H 0.39 -0.76 8.70 -74.06 -0.64 -1.40 16 30 H -0.30 -2.87 7.11 99.48 0.71 -2.16 16 31 H -0.28 -2.05 7.11 99.48 0.71 -1.34 16 32 H 0.12 -1.14 7.66 -2.39 -0.02 -1.16 16 33 H 0.12 -1.11 7.66 -2.39 -0.02 -1.13 16 34 H 0.42 -5.39 8.71 -92.71 -0.81 -6.20 16 35 H 0.10 -0.87 8.14 -2.38 -0.02 -0.89 16 36 H 0.11 -1.14 8.09 -2.39 -0.02 -1.16 16 37 H 0.10 -0.48 8.12 -2.38 -0.02 -0.50 16 38 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 39 H 0.16 -1.53 6.29 -2.91 -0.02 -1.55 16 40 H 0.16 -1.27 6.29 -2.91 -0.02 -1.29 16 Total: 0.00 -27.91 356.34 -0.67 -28.58 By element: Atomic # 1 Polarization: -20.85 SS G_CDS: -0.32 Total: -21.17 kcal Atomic # 6 Polarization: 2.45 SS G_CDS: 3.95 Total: 6.40 kcal Atomic # 7 Polarization: 3.64 SS G_CDS: -2.36 Total: 1.28 kcal Atomic # 8 Polarization: -15.21 SS G_CDS: -3.31 Total: -18.52 kcal Atomic # 14 Polarization: 2.06 SS G_CDS: 2.05 Total: 4.11 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.69 Total: -0.69 kcal Total: -27.91 -0.67 -28.58 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17509654_4974302.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.254 kcal (2) G-P(sol) polarization free energy of solvation -27.907 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.161 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.672 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.579 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.833 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds