Wall clock time and date at job start Sun Mar 7 2021 10:02:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52989 * 1 3 3 C 1.52977 * 109.43455 * 2 1 4 4 C 1.53128 * 109.44013 * 178.31033 * 3 2 1 5 5 C 1.52842 * 109.26620 * 57.99044 * 4 3 2 6 6 C 1.53205 * 113.45816 * 172.77197 * 5 4 3 7 7 C 1.53546 * 83.26677 * 219.25185 * 6 5 4 8 8 N 1.46772 * 113.40816 * 73.99380 * 5 4 3 9 9 C 1.34779 * 136.10336 * 321.81351 * 8 5 4 10 10 O 1.21282 * 119.99457 * 354.09601 * 9 8 5 11 11 C 1.50695 * 120.00481 * 174.09684 * 9 8 5 12 12 O 1.42904 * 109.47267 * 180.02562 * 11 9 8 13 13 C 1.35912 * 116.99923 * 179.97438 * 12 11 9 14 14 C 1.38792 * 120.05463 * 180.02562 * 13 12 11 15 15 Br 1.89094 * 120.04032 * 0.02562 * 14 13 12 16 16 C 1.38242 * 119.92416 * 180.02562 * 14 13 12 17 17 C 1.38240 * 120.04960 * 359.97438 * 16 14 13 18 18 C 1.50697 * 119.94562 * 180.02562 * 17 16 14 19 19 O 1.42896 * 109.47019 * 64.99792 * 18 17 16 20 20 Si 1.86298 * 109.47208 * 185.00066 * 18 17 16 21 21 C 1.38294 * 120.11594 * 359.97438 * 17 16 14 22 22 C 1.38146 * 120.06716 * 359.76955 * 21 17 16 23 23 C 1.52859 * 112.67690 * 303.48369 * 5 4 3 24 24 C 1.52968 * 109.43870 * 239.78658 * 2 1 3 25 25 H 1.08999 * 109.47489 * 60.00304 * 1 2 3 26 26 H 1.08999 * 109.47047 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.47270 * 300.00087 * 1 2 3 28 28 H 1.08996 * 109.40494 * 119.89107 * 2 1 3 29 29 H 1.08996 * 109.48008 * 58.32042 * 3 2 1 30 30 H 1.08994 * 109.48222 * 298.30064 * 3 2 1 31 31 H 1.09004 * 109.51099 * 177.94177 * 4 3 2 32 32 H 1.08998 * 109.51370 * 298.03467 * 4 3 2 33 33 H 1.09005 * 114.21897 * 332.81689 * 6 5 4 34 34 H 1.09001 * 114.21918 * 105.68085 * 6 5 4 35 35 H 1.09000 * 113.45922 * 271.02830 * 7 6 5 36 36 H 1.09004 * 113.50937 * 140.62888 * 7 6 5 37 37 H 1.09003 * 109.47078 * 299.99651 * 11 9 8 38 38 H 1.08996 * 109.47088 * 59.99863 * 11 9 8 39 39 H 1.08005 * 119.97534 * 179.97438 * 16 14 13 40 40 H 1.09006 * 109.47101 * 304.99667 * 18 17 16 41 41 H 0.96705 * 113.99609 * 180.02562 * 19 18 17 42 42 H 1.48507 * 109.99723 * 178.67974 * 20 18 17 43 43 H 1.48500 * 109.99973 * 299.99841 * 20 18 17 44 44 H 1.07999 * 119.96112 * 180.02562 * 21 17 16 45 45 H 1.07999 * 120.01983 * 180.25755 * 22 21 17 46 46 H 1.09000 * 109.46900 * 296.58051 * 23 5 4 47 47 H 1.08999 * 109.55331 * 176.47393 * 23 5 4 48 48 H 1.09003 * 109.47506 * 301.67515 * 24 2 1 49 49 H 1.08996 * 109.47594 * 61.68656 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0389 1.4426 0.0000 4 6 3.5696 1.4430 0.0426 5 6 4.1077 0.6663 -1.1588 6 6 5.6298 0.7534 -1.3092 7 6 5.2956 0.8450 -2.8051 8 7 3.9845 1.3951 -2.4269 9 6 3.0725 2.2088 -2.9948 10 8 2.0052 2.3968 -2.4503 11 6 3.3788 2.8852 -4.3061 12 8 2.2649 3.6896 -4.6989 13 6 2.3791 4.3728 -5.8682 14 6 1.3353 5.1740 -6.3099 15 35 -0.2474 5.3170 -5.2851 16 6 1.4541 5.8673 -7.5000 17 6 2.6112 5.7633 -8.2492 18 6 2.7384 6.5206 -9.5459 19 8 2.7311 7.9246 -9.2802 20 14 4.3364 6.0551 -10.3827 21 6 3.6528 4.9664 -7.8103 22 6 3.5413 4.2757 -6.6192 23 6 3.5696 -0.7628 -1.2257 24 6 2.0390 -0.7259 -1.2465 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 1.8920 -0.5123 0.8913 29 1 1.6509 1.9649 0.8745 30 1 1.7004 1.9475 -0.9047 31 1 3.9346 2.4694 0.0057 32 1 3.9083 0.9691 0.9639 33 1 6.0692 1.6600 -0.8929 34 1 6.1601 -0.1553 -1.0243 35 1 5.2335 -0.1261 -3.2961 36 1 5.9225 1.5523 -3.3482 37 1 4.2601 3.5164 -4.1922 38 1 3.5689 2.1300 -5.0687 39 1 0.6422 6.4906 -7.8448 40 1 1.9009 6.2696 -10.1969 41 1 2.8094 8.4750 -10.0715 42 1 4.4588 6.7712 -11.6780 43 1 5.4861 6.3922 -9.5054 44 1 4.5558 4.8873 -8.3974 45 1 4.3568 3.6568 -6.2751 46 1 3.9085 -1.3199 -0.3522 47 1 3.9343 -1.2480 -2.1311 48 1 1.6510 -1.7445 -1.2578 49 1 1.7003 -0.1982 -2.1381 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17514090_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:02:24 Heat of formation + Delta-G solvation = -17.261189 kcal Electronic energy + Delta-G solvation = -31523.209194 eV Core-core repulsion = 27272.466689 eV Total energy + Delta-G solvation = -4250.742505 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.093 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.34781 -41.47870 -39.69040 -38.67689 -37.78481 -37.38904 -33.68267 -32.61263 -32.00847 -31.84761 -30.97904 -30.40724 -28.97928 -26.69095 -26.30664 -24.28263 -24.01396 -23.17086 -22.64471 -22.07558 -21.11043 -19.67636 -18.85303 -18.57584 -18.13946 -17.68826 -17.58555 -16.83807 -16.55614 -16.47509 -15.78120 -15.64255 -15.58990 -15.20779 -14.98727 -14.95418 -14.91358 -14.64214 -14.20876 -14.03701 -13.91062 -13.85028 -13.59751 -13.49286 -13.37185 -13.24751 -12.84740 -12.62368 -12.43808 -12.36679 -12.30281 -12.15082 -12.09058 -11.86954 -11.80840 -11.77966 -11.51716 -11.23165 -11.12199 -10.83283 -10.49705 -10.16859 -9.99075 -9.66052 -9.34399 -4.90924 -0.08264 0.09457 0.61018 1.25793 1.31652 1.48723 1.62928 1.96848 2.31743 2.34423 3.21748 3.33812 3.42750 3.61990 3.67636 3.71532 3.75533 3.84667 3.86003 3.98119 4.01550 4.05383 4.07859 4.13965 4.25873 4.32562 4.34988 4.46414 4.47961 4.52747 4.57753 4.61261 4.63894 4.68817 4.76613 4.81643 4.88609 4.90628 4.96286 4.98999 5.04900 5.06204 5.08360 5.22830 5.23948 5.28628 5.32359 5.39238 5.45406 5.48747 5.75061 6.05731 6.58966 6.70775 7.24200 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.083 4.083 3 C -0.170 4.170 4 C -0.110 4.110 5 C 0.158 3.842 6 C -0.137 4.137 7 C 0.096 3.904 8 N -0.638 5.638 9 C 0.533 3.467 10 O -0.543 6.543 11 C 0.042 3.958 12 O -0.302 6.302 13 C 0.148 3.852 14 C -0.144 4.144 15 Br -0.052 7.052 16 C -0.036 4.036 17 C -0.114 4.114 18 C -0.088 4.088 19 O -0.560 6.560 20 Si 0.774 3.226 21 C -0.057 4.057 22 C -0.190 4.190 23 C -0.111 4.111 24 C -0.108 4.108 25 H 0.036 0.964 26 H 0.060 0.940 27 H 0.049 0.951 28 H 0.069 0.931 29 H 0.034 0.966 30 H 0.111 0.889 31 H 0.051 0.949 32 H 0.081 0.919 33 H 0.097 0.903 34 H 0.116 0.884 35 H 0.108 0.892 36 H 0.104 0.896 37 H 0.120 0.880 38 H 0.125 0.875 39 H 0.139 0.861 40 H 0.094 0.906 41 H 0.395 0.605 42 H -0.290 1.290 43 H -0.287 1.287 44 H 0.162 0.838 45 H 0.177 0.823 46 H 0.094 0.906 47 H 0.086 0.914 48 H 0.066 0.934 49 H 0.038 0.962 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.010 -6.111 -4.840 12.688 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.101 4.101 3 C -0.206 4.206 4 C -0.148 4.148 5 C 0.074 3.926 6 C -0.174 4.174 7 C -0.025 4.025 8 N -0.374 5.374 9 C 0.323 3.677 10 O -0.422 6.422 11 C -0.035 4.035 12 O -0.215 6.215 13 C 0.100 3.900 14 C -0.224 4.224 15 Br 0.033 6.967 16 C -0.055 4.055 17 C -0.115 4.115 18 C -0.196 4.196 19 O -0.370 6.370 20 Si 0.679 3.321 21 C -0.075 4.075 22 C -0.209 4.209 23 C -0.149 4.149 24 C -0.146 4.146 25 H 0.055 0.945 26 H 0.079 0.921 27 H 0.068 0.932 28 H 0.087 0.913 29 H 0.053 0.947 30 H 0.128 0.872 31 H 0.070 0.930 32 H 0.100 0.900 33 H 0.116 0.884 34 H 0.134 0.866 35 H 0.126 0.874 36 H 0.123 0.877 37 H 0.138 0.862 38 H 0.143 0.857 39 H 0.157 0.843 40 H 0.111 0.889 41 H 0.246 0.754 42 H -0.217 1.217 43 H -0.215 1.215 44 H 0.179 0.821 45 H 0.194 0.806 46 H 0.112 0.888 47 H 0.104 0.896 48 H 0.085 0.915 49 H 0.057 0.943 Dipole moment (debyes) X Y Z Total from point charges 9.212 -5.750 -3.832 11.515 hybrid contribution -0.746 1.585 -0.132 1.757 sum 8.466 -4.165 -3.964 10.234 Atomic orbital electron populations 1.21790 0.96238 1.01423 1.00798 1.21007 0.94885 0.95979 0.98268 1.22575 0.95943 0.97404 1.04710 1.21618 0.95715 0.99460 0.98024 1.22094 0.95467 0.91690 0.83372 1.23473 0.92792 1.05217 0.95949 1.23359 0.80735 1.00546 0.97889 1.49831 1.21188 1.45387 1.21014 1.19972 0.82705 0.79268 0.85720 1.90398 1.24902 1.64101 1.62773 1.22691 0.89416 0.96042 0.95365 1.86240 1.41182 1.58391 1.35667 1.18797 0.93747 0.91522 0.85929 1.21250 0.94338 1.07209 0.99558 1.96748 1.30810 1.97744 1.71373 1.20904 0.98587 0.95210 0.90836 1.19418 0.94382 1.00186 0.97508 1.25090 1.13580 0.82933 0.97978 1.86558 1.96051 1.16291 1.38142 0.94151 0.72779 0.90106 0.75103 1.21238 0.97837 0.93454 0.94924 1.21503 0.97398 1.05423 0.96526 1.21754 0.94829 0.94127 1.04229 1.21475 0.96222 0.99749 0.97118 0.94485 0.92110 0.93228 0.91277 0.94717 0.87152 0.93028 0.90013 0.88431 0.86622 0.87403 0.87746 0.86205 0.85698 0.84333 0.88856 0.75394 1.21678 1.21462 0.82104 0.80561 0.88786 0.89569 0.91532 0.94313 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.06 9.19 71.98 0.66 -0.39 16 2 C -0.08 -0.44 2.67 -10.82 -0.03 -0.47 16 3 C -0.17 -1.42 5.05 30.63 0.15 -1.26 16 4 C -0.11 -0.26 5.19 30.58 0.16 -0.10 16 5 C 0.16 -0.45 0.91 -0.06 0.00 -0.45 16 6 C -0.14 1.36 7.61 30.85 0.23 1.59 16 7 C 0.10 -1.08 8.06 82.86 0.67 -0.41 16 8 N -0.64 1.41 3.36 -814.55 -2.73 -1.32 16 9 C 0.53 2.25 8.02 87.66 0.70 2.95 16 10 O -0.54 -7.69 12.64 16.00 0.20 -7.49 16 11 C 0.04 -0.08 5.06 71.23 0.36 0.28 16 12 O -0.30 -2.09 9.01 -73.52 -0.66 -2.75 16 13 C 0.15 0.70 6.68 22.52 0.15 0.85 16 14 C -0.14 -1.12 6.24 22.40 0.14 -0.98 16 15 Br -0.05 -0.58 33.16 -20.37 -0.68 -1.25 16 16 C -0.04 -0.18 9.42 22.27 0.21 0.03 16 17 C -0.11 -0.14 5.38 -19.85 -0.11 -0.25 16 18 C -0.09 0.18 2.79 71.23 0.20 0.38 16 19 O -0.56 -0.84 12.81 -148.98 -1.91 -2.74 16 20 Si 0.77 -3.96 29.85 68.60 2.05 -1.91 16 21 C -0.06 0.14 8.66 22.26 0.19 0.34 16 22 C -0.19 0.48 9.04 22.36 0.20 0.68 16 23 C -0.11 0.40 5.22 30.59 0.16 0.56 16 24 C -0.11 -0.31 5.20 30.62 0.16 -0.15 16 25 H 0.04 0.41 8.14 -2.39 -0.02 0.39 16 26 H 0.06 0.29 8.14 -2.39 -0.02 0.27 16 27 H 0.05 0.36 8.14 -2.39 -0.02 0.34 16 28 H 0.07 0.24 8.14 -2.39 -0.02 0.22 16 29 H 0.03 0.36 8.14 -2.39 -0.02 0.34 16 30 H 0.11 1.59 3.52 -61.55 -0.22 1.37 16 31 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 32 H 0.08 -0.02 8.14 -2.39 -0.02 -0.04 16 33 H 0.10 -0.91 8.12 -2.38 -0.02 -0.92 16 34 H 0.12 -1.57 8.10 -2.39 -0.02 -1.59 16 35 H 0.11 -1.53 7.30 -2.39 -0.02 -1.55 16 36 H 0.10 -1.62 8.14 -2.38 -0.02 -1.64 16 37 H 0.12 -0.91 7.65 -2.39 -0.02 -0.93 16 38 H 0.13 -1.07 7.68 -2.39 -0.02 -1.09 16 39 H 0.14 0.63 8.06 -2.91 -0.02 0.61 16 40 H 0.09 -0.50 7.96 -2.38 -0.02 -0.52 16 41 H 0.40 -2.58 8.74 -74.05 -0.65 -3.23 16 42 H -0.29 0.04 7.11 99.48 0.71 0.74 16 43 H -0.29 -0.16 7.04 99.48 0.70 0.54 16 44 H 0.16 -1.29 4.86 -2.91 -0.01 -1.31 16 45 H 0.18 -1.88 6.30 -2.91 -0.02 -1.90 16 46 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 47 H 0.09 -0.58 7.02 -2.39 -0.02 -0.59 16 48 H 0.07 0.10 8.14 -2.39 -0.02 0.08 16 49 H 0.04 0.32 7.77 -2.39 -0.02 0.31 16 Total: 0.00 -25.39 399.84 0.63 -24.75 By element: Atomic # 1 Polarization: -10.62 SS G_CDS: 0.15 Total: -10.47 kcal Atomic # 6 Polarization: -1.04 SS G_CDS: 4.22 Total: 3.18 kcal Atomic # 7 Polarization: 1.41 SS G_CDS: -2.73 Total: -1.32 kcal Atomic # 8 Polarization: -10.62 SS G_CDS: -2.37 Total: -12.98 kcal Atomic # 14 Polarization: -3.96 SS G_CDS: 2.05 Total: -1.91 kcal Atomic # 35 Polarization: -0.58 SS G_CDS: -0.68 Total: -1.25 kcal Total: -25.39 0.63 -24.75 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17514090_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.493 kcal (2) G-P(sol) polarization free energy of solvation -25.387 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.894 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.633 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.754 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.261 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds