Wall clock time and date at job start Sun Mar 7 2021 10:02:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.52976 * 109.43474 * 2 1 4 4 C 1.53124 * 109.44249 * 181.68579 * 3 2 1 5 5 C 1.52849 * 109.21639 * 301.98282 * 4 3 2 6 6 C 1.53235 * 113.39453 * 286.06339 * 5 4 3 7 7 C 1.53843 * 83.15957 * 219.00444 * 6 5 4 8 8 N 1.46751 * 113.46773 * 187.29096 * 5 4 3 9 9 C 1.34780 * 136.09307 * 321.77567 * 8 5 4 10 10 O 1.21283 * 120.00221 * 359.97438 * 9 8 5 11 11 C 1.50704 * 120.00259 * 179.97438 * 9 8 5 12 12 N 1.46494 * 109.47122 * 180.02562 * 11 9 8 13 13 C 1.36848 * 125.05860 * 265.80876 * 12 11 9 14 14 C 1.34232 * 109.93326 * 179.97438 * 13 12 11 15 15 C 1.50706 * 126.50246 * 179.48409 * 14 13 12 16 16 O 1.42894 * 109.47273 * 254.98530 * 15 14 13 17 17 Si 1.86308 * 109.46610 * 14.97996 * 15 14 13 18 18 C 1.46494 * 107.00184 * 359.47025 * 14 13 12 19 19 C 1.39590 * 134.03458 * 179.97438 * 18 14 13 20 20 C 1.36668 * 119.76122 * 179.74107 * 19 18 14 21 21 C 1.38784 * 120.52827 * 0.23709 * 20 19 18 22 22 C 1.37787 * 120.66684 * 0.02562 * 21 20 19 23 23 C 1.37691 * 125.06511 * 85.00421 * 12 11 9 24 24 C 1.52842 * 112.68300 * 56.60858 * 5 4 3 25 25 C 1.52967 * 109.43626 * 120.21523 * 2 1 3 26 26 H 1.09000 * 109.47188 * 60.00248 * 1 2 3 27 27 H 1.08998 * 109.47032 * 179.97438 * 1 2 3 28 28 H 1.08994 * 109.47507 * 300.00046 * 1 2 3 29 29 H 1.09003 * 109.40662 * 240.10872 * 2 1 3 30 30 H 1.08995 * 109.48020 * 61.69658 * 3 2 1 31 31 H 1.09003 * 109.48205 * 301.67923 * 3 2 1 32 32 H 1.08996 * 109.51293 * 182.05630 * 4 3 2 33 33 H 1.09003 * 109.55552 * 61.92949 * 4 3 2 34 34 H 1.08994 * 114.22067 * 332.76201 * 6 5 4 35 35 H 1.08999 * 114.21902 * 105.43363 * 6 5 4 36 36 H 1.08998 * 113.45496 * 271.28340 * 7 6 5 37 37 H 1.08998 * 113.55489 * 140.78129 * 7 6 5 38 38 H 1.09000 * 109.46797 * 59.99991 * 11 9 8 39 39 H 1.08996 * 109.46690 * 300.00228 * 11 9 8 40 40 H 1.07994 * 125.03242 * 359.42468 * 13 12 11 41 41 H 1.08992 * 109.46992 * 134.97967 * 15 14 13 42 42 H 0.96704 * 114.00283 * 179.97438 * 16 15 14 43 43 H 1.48497 * 109.99838 * 299.99817 * 17 15 14 44 44 H 1.48493 * 109.99697 * 61.31994 * 17 15 14 45 45 H 1.08002 * 120.12275 * 0.02679 * 19 18 14 46 46 H 1.07994 * 119.73473 * 180.25228 * 20 19 18 47 47 H 1.07996 * 119.66833 * 179.97438 * 21 20 19 48 48 H 1.08002 * 120.11354 * 180.02562 * 22 21 20 49 49 H 1.08998 * 109.51394 * 63.32592 * 24 5 4 50 50 H 1.08997 * 109.51491 * 183.48347 * 24 5 4 51 51 H 1.08997 * 109.47353 * 298.32100 * 25 2 1 52 52 H 1.09001 * 109.47100 * 58.32481 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0390 1.4426 0.0000 4 6 3.5696 1.4430 -0.0425 5 6 4.1065 0.6667 1.1598 6 6 3.9757 1.4280 2.4832 7 6 5.3582 0.8130 2.7614 8 7 5.5643 0.7507 1.3060 9 6 6.6247 0.7605 0.4742 10 8 6.4558 0.6857 -0.7245 11 6 8.0202 0.8643 1.0334 12 7 8.9887 0.8552 -0.0657 13 6 9.6282 -0.2575 -0.5407 14 6 10.4469 0.0807 -1.5492 15 6 11.3360 -0.8502 -2.3329 16 8 12.6929 -0.6714 -1.9219 17 14 10.8194 -2.6126 -2.0194 18 6 10.3121 1.5264 -1.7439 19 6 10.8915 2.4456 -2.6203 20 6 10.5412 3.7647 -2.5489 21 6 9.6173 4.1988 -1.6086 22 6 9.0373 3.3094 -0.7305 23 6 9.3793 1.9624 -0.7850 24 6 3.5696 -0.7628 1.2258 25 6 2.0390 -0.7259 1.2465 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3634 0.5138 0.8899 29 1 1.8921 -0.5124 -0.8913 30 1 1.7005 1.9475 0.9047 31 1 1.6510 1.9650 -0.8745 32 1 3.9346 2.4694 -0.0057 33 1 3.9092 0.9687 -0.9633 34 1 3.9778 2.5127 2.3772 35 1 3.1826 1.0601 3.1342 36 1 5.3095 -0.1675 3.2350 37 1 6.0433 1.4928 3.2679 38 1 8.2110 0.0181 1.6934 39 1 8.1180 1.7929 1.5957 40 1 9.5003 -1.2581 -0.1550 41 1 11.2463 -0.6289 -3.3963 42 1 13.3225 -1.2404 -2.3855 43 1 10.9373 -2.9267 -0.5729 44 1 9.4203 -2.8197 -2.4719 45 1 11.6106 2.1149 -3.3551 46 1 10.9866 4.4748 -3.2298 47 1 9.3509 5.2445 -1.5642 48 1 8.3191 3.6570 -0.0027 49 1 3.9086 -1.3197 0.3524 50 1 3.9343 -1.2472 2.1316 51 1 1.7001 -0.1983 2.1381 52 1 1.6510 -1.7445 1.2576 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17514090_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:02:58 Heat of formation + Delta-G solvation = 35.345700 kcal Electronic energy + Delta-G solvation = -32564.445171 eV Core-core repulsion = 28497.068256 eV Total energy + Delta-G solvation = -4067.376915 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.193 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.60124 -42.15128 -39.54655 -37.95861 -37.77563 -37.42282 -34.15851 -32.49615 -32.06862 -31.37975 -30.57262 -30.15284 -28.70911 -26.84416 -25.56513 -24.52545 -23.68846 -23.43935 -22.93539 -22.10258 -20.95663 -20.41845 -19.29026 -18.26471 -18.17835 -18.02599 -17.67515 -17.01708 -16.94653 -16.33249 -15.90491 -15.55761 -15.44975 -15.31547 -15.24243 -15.10532 -14.78605 -14.73701 -14.56920 -14.42965 -14.07496 -14.00605 -13.85790 -13.46423 -13.44932 -13.37365 -13.33520 -13.00864 -12.68433 -12.62946 -12.54135 -12.44136 -12.31173 -12.17013 -11.88752 -11.80503 -11.63544 -11.63312 -11.30141 -11.09844 -10.85765 -10.39012 -10.09585 -9.82409 -9.01244 -8.52159 -4.95156 0.28355 0.79607 1.30395 1.38332 1.44835 1.61862 1.77396 1.91680 2.05928 3.01561 3.12048 3.24374 3.43822 3.55412 3.60956 3.67168 3.68770 3.76704 3.82975 3.85372 3.90121 3.92956 3.96694 4.10991 4.11653 4.18610 4.32987 4.34005 4.36773 4.38594 4.41627 4.48251 4.52597 4.58602 4.63229 4.71850 4.75276 4.78254 4.79545 4.87208 4.90321 4.92660 4.99685 5.02013 5.04381 5.15032 5.18278 5.26258 5.26708 5.33393 5.45858 5.65613 5.81299 5.86953 5.90264 6.23033 6.36546 6.56151 6.81716 6.99884 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.096 4.096 3 C -0.110 4.110 4 C -0.115 4.115 5 C 0.167 3.833 6 C -0.145 4.145 7 C 0.094 3.906 8 N -0.642 5.642 9 C 0.520 3.480 10 O -0.512 6.512 11 C 0.098 3.902 12 N -0.465 5.465 13 C 0.065 3.935 14 C -0.150 4.150 15 C -0.032 4.032 16 O -0.547 6.547 17 Si 0.681 3.319 18 C -0.085 4.085 19 C -0.063 4.063 20 C -0.145 4.145 21 C -0.096 4.096 22 C -0.127 4.127 23 C 0.110 3.890 24 C -0.116 4.116 25 C -0.109 4.109 26 H 0.055 0.945 27 H 0.055 0.945 28 H 0.055 0.945 29 H 0.070 0.930 30 H 0.065 0.935 31 H 0.067 0.933 32 H 0.066 0.934 33 H 0.074 0.926 34 H 0.098 0.902 35 H 0.094 0.906 36 H 0.089 0.911 37 H 0.081 0.919 38 H 0.118 0.882 39 H 0.117 0.883 40 H 0.161 0.839 41 H 0.070 0.930 42 H 0.378 0.622 43 H -0.254 1.254 44 H -0.256 1.256 45 H 0.123 0.877 46 H 0.124 0.876 47 H 0.126 0.874 48 H 0.114 0.886 49 H 0.069 0.931 50 H 0.070 0.930 51 H 0.067 0.933 52 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.747 -1.555 4.139 4.754 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.114 4.114 3 C -0.148 4.148 4 C -0.153 4.153 5 C 0.083 3.917 6 C -0.183 4.183 7 C -0.029 4.029 8 N -0.379 5.379 9 C 0.307 3.693 10 O -0.386 6.386 11 C -0.028 4.028 12 N -0.149 5.149 13 C -0.060 4.060 14 C -0.157 4.157 15 C -0.143 4.143 16 O -0.352 6.352 17 Si 0.582 3.418 18 C -0.089 4.089 19 C -0.082 4.082 20 C -0.164 4.164 21 C -0.115 4.115 22 C -0.147 4.147 23 C 0.006 3.994 24 C -0.154 4.154 25 C -0.147 4.147 26 H 0.075 0.925 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.088 0.912 30 H 0.084 0.916 31 H 0.086 0.914 32 H 0.084 0.916 33 H 0.093 0.907 34 H 0.116 0.884 35 H 0.112 0.888 36 H 0.107 0.893 37 H 0.100 0.900 38 H 0.136 0.864 39 H 0.135 0.865 40 H 0.178 0.822 41 H 0.088 0.912 42 H 0.225 0.775 43 H -0.179 1.179 44 H -0.180 1.180 45 H 0.141 0.859 46 H 0.142 0.858 47 H 0.144 0.856 48 H 0.132 0.868 49 H 0.088 0.912 50 H 0.088 0.912 51 H 0.086 0.914 52 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -2.664 -1.708 4.400 5.420 hybrid contribution -0.194 0.410 0.150 0.478 sum -2.858 -1.298 4.550 5.528 Atomic orbital electron populations 1.21827 0.94841 1.01892 1.01982 1.21163 0.95761 0.96031 0.98467 1.21568 0.94245 0.96513 1.02433 1.21665 0.95720 1.00004 0.97905 1.21815 0.78274 0.95689 0.95943 1.23532 0.97094 1.01055 0.96636 1.23149 0.96768 1.01292 0.81700 1.49888 1.06389 1.73142 1.08442 1.20531 0.85319 0.76933 0.86502 1.90802 1.85156 1.48301 1.14329 1.21513 0.85862 1.06586 0.88829 1.43225 1.36088 1.05905 1.29641 1.21397 0.96952 0.90817 0.96850 1.19525 1.02997 0.92452 1.00760 1.23929 0.84412 1.07072 0.98893 1.86539 1.15583 1.66630 1.66478 0.95409 0.84102 0.79064 0.83223 1.18926 0.99478 0.92497 0.98048 1.20280 0.98323 0.92155 0.97422 1.20667 0.99848 0.95665 1.00249 1.20822 0.96667 0.98993 0.95016 1.19950 1.02917 0.89564 1.02282 1.18167 0.98306 0.88562 0.94398 1.21702 0.96421 0.94485 1.02802 1.21569 0.93713 1.01024 0.98356 0.92546 0.92583 0.92554 0.91162 0.91590 0.91438 0.91561 0.90719 0.88400 0.88765 0.89263 0.90020 0.86363 0.86476 0.82190 0.91164 0.77518 1.17910 1.18044 0.85860 0.85785 0.85630 0.86754 0.91184 0.91169 0.91384 0.91270 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.16 9.19 37.16 0.34 0.50 16 2 C -0.10 0.06 2.67 -90.65 -0.24 -0.18 16 3 C -0.11 0.05 5.12 -26.68 -0.14 -0.09 16 4 C -0.11 -0.14 4.84 -26.75 -0.13 -0.27 16 5 C 0.17 -0.06 0.98 -137.24 -0.13 -0.20 16 6 C -0.15 0.43 7.16 -26.17 -0.19 0.24 16 7 C 0.09 -0.31 8.07 -8.79 -0.07 -0.38 16 8 N -0.64 -0.18 3.37 -171.20 -0.58 -0.76 16 9 C 0.52 1.57 8.05 -10.98 -0.09 1.48 16 10 O -0.51 -3.95 16.25 5.55 0.09 -3.86 16 11 C 0.10 0.07 6.31 -5.19 -0.03 0.04 16 12 N -0.47 -2.01 2.27 -115.71 -0.26 -2.27 16 13 C 0.06 0.30 9.89 -16.72 -0.17 0.14 16 14 C -0.15 -0.81 5.61 -102.71 -0.58 -1.38 16 15 C -0.03 -0.07 3.05 36.01 0.11 0.04 16 16 O -0.55 -1.15 12.86 -35.23 -0.45 -1.61 16 17 Si 0.68 0.36 30.79 -169.99 -5.23 -4.87 16 18 C -0.09 -0.53 6.35 -105.14 -0.67 -1.20 16 19 C -0.06 -0.30 10.05 -39.64 -0.40 -0.70 16 20 C -0.15 -0.51 9.97 -39.95 -0.40 -0.91 16 21 C -0.10 -0.32 10.01 -39.54 -0.40 -0.71 16 22 C -0.13 -0.53 10.00 -39.43 -0.39 -0.92 16 23 C 0.11 0.62 6.80 -83.99 -0.57 0.05 16 24 C -0.12 0.08 5.25 -26.75 -0.14 -0.06 16 25 C -0.11 0.17 5.11 -26.69 -0.14 0.03 16 26 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 27 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.07 -0.09 7.94 -51.93 -0.41 -0.50 16 31 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 32 H 0.07 0.12 8.12 -51.93 -0.42 -0.30 16 33 H 0.07 0.31 7.65 -51.93 -0.40 -0.09 16 34 H 0.10 -0.28 8.10 -51.93 -0.42 -0.70 16 35 H 0.09 -0.40 7.34 -51.93 -0.38 -0.78 16 36 H 0.09 -0.39 7.28 -51.93 -0.38 -0.77 16 37 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 38 H 0.12 -0.23 8.12 -51.93 -0.42 -0.65 16 39 H 0.12 -0.17 8.14 -51.93 -0.42 -0.59 16 40 H 0.16 0.46 6.30 -52.49 -0.33 0.13 16 41 H 0.07 0.09 7.96 -51.93 -0.41 -0.33 16 42 H 0.38 -1.22 8.74 45.56 0.40 -0.83 16 43 H -0.25 -0.70 7.04 56.52 0.40 -0.30 16 44 H -0.26 -0.96 7.11 56.52 0.40 -0.56 16 45 H 0.12 0.39 8.06 -52.49 -0.42 -0.03 16 46 H 0.12 0.15 8.06 -52.49 -0.42 -0.28 16 47 H 0.13 0.11 8.06 -52.49 -0.42 -0.32 16 48 H 0.11 0.26 8.06 -52.49 -0.42 -0.16 16 49 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 50 H 0.07 -0.13 7.01 -51.93 -0.36 -0.49 16 51 H 0.07 -0.16 7.34 -51.93 -0.38 -0.55 16 52 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 LS Contribution 411.56 15.07 6.20 6.20 Total: 0.00 -10.36 411.56 -13.27 -23.63 By element: Atomic # 1 Polarization: -3.37 SS G_CDS: -8.62 Total: -11.99 kcal Atomic # 6 Polarization: -0.06 SS G_CDS: -4.41 Total: -4.47 kcal Atomic # 7 Polarization: -2.19 SS G_CDS: -0.84 Total: -3.03 kcal Atomic # 8 Polarization: -5.11 SS G_CDS: -0.36 Total: -5.47 kcal Atomic # 14 Polarization: 0.36 SS G_CDS: -5.23 Total: -4.87 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -10.36 -13.27 -23.63 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17514090_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.978 kcal (2) G-P(sol) polarization free energy of solvation -10.363 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.632 kcal (6) G-S(sol) free energy of system = (1) + (5) 35.346 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds