Wall clock time and date at job start Sun Mar 7 2021 08:18:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86298 * 109.47352 * 2 1 4 4 C 1.50707 * 109.46988 * 119.99976 * 2 1 3 5 5 C 1.38399 * 119.82746 * 64.99962 * 4 2 1 6 6 C 1.37889 * 120.16951 * 180.02562 * 5 4 2 7 7 C 1.39836 * 119.82865 * 359.97438 * 6 5 4 8 8 C 1.47211 * 120.17203 * 179.97438 * 7 6 5 9 9 C 1.34804 * 119.99794 * 180.02562 * 8 7 6 10 10 C 1.46432 * 119.99782 * 180.02562 * 9 8 7 11 11 O 1.21703 * 119.99903 * 359.97438 * 10 9 8 12 12 N 1.34777 * 120.00077 * 180.02562 * 10 9 8 13 13 C 1.46498 * 119.99828 * 180.27581 * 12 10 9 14 14 H 1.09002 * 112.85022 * 335.91707 * 13 12 10 15 15 C 1.53782 * 113.61718 * 107.22525 * 13 12 10 16 16 C 1.53774 * 87.08161 * 89.11276 * 15 13 12 17 17 H 1.09000 * 113.69696 * 270.87608 * 16 15 13 18 18 C 1.53000 * 113.61649 * 139.98421 * 16 15 13 19 19 N 1.47309 * 110.60120 * 198.97675 * 18 16 15 20 20 C 1.34866 * 106.43814 * 241.51730 * 19 18 16 21 21 O 1.21539 * 123.73452 * 179.97438 * 20 19 18 22 22 N 1.33793 * 112.49791 * 359.86157 * 20 19 18 23 23 C 1.34764 * 111.64595 * 0.08713 * 22 20 19 24 24 O 1.21238 * 127.15847 * 180.02562 * 23 22 20 25 25 C 1.53781 * 113.61158 * 204.72374 * 13 12 10 26 26 C 1.39839 * 119.65726 * 0.24919 * 7 6 5 27 27 C 1.37890 * 119.82810 * 359.53715 * 26 7 6 28 28 H 0.96699 * 113.99862 * 59.99530 * 1 2 3 29 29 H 1.09004 * 109.47412 * 239.99868 * 2 1 3 30 30 H 1.48501 * 110.00149 * 298.67921 * 3 2 1 31 31 H 1.48499 * 110.00380 * 60.00072 * 3 2 1 32 32 H 1.07997 * 119.91635 * 359.97438 * 5 4 2 33 33 H 1.07996 * 120.08538 * 179.97438 * 6 5 4 34 34 H 1.08001 * 119.99663 * 359.97438 * 8 7 6 35 35 H 1.08001 * 120.00538 * 359.97438 * 9 8 7 36 36 H 0.97001 * 119.99727 * 359.97438 * 12 10 9 37 37 H 1.08999 * 113.61704 * 203.66488 * 15 13 12 38 38 H 1.09006 * 113.61098 * 334.56706 * 15 13 12 39 39 H 1.09001 * 110.53023 * 321.79799 * 18 16 15 40 40 H 0.97000 * 126.69621 * 61.43831 * 19 18 16 41 41 H 0.97004 * 124.17538 * 180.02562 * 22 20 19 42 42 H 1.08995 * 113.61890 * 25.43111 * 25 13 12 43 43 H 1.09004 * 113.61421 * 156.25407 * 25 13 12 44 44 H 1.08005 * 120.08168 * 179.72469 * 26 7 6 45 45 H 1.07999 * 119.91467 * 180.20861 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6823 -2.0619 1.3950 6 6 2.1381 -2.7188 2.5184 7 6 2.8541 -2.0161 3.4925 8 6 3.3438 -2.7098 4.6951 9 6 4.0332 -2.0288 5.6322 10 6 4.5208 -2.7189 6.8281 11 8 4.3033 -3.9072 6.9762 12 7 5.2096 -2.0381 7.7654 13 6 5.7026 -2.7299 8.9589 14 1 5.1319 -3.6284 9.1934 15 6 7.2250 -2.9470 8.9604 16 6 7.3411 -1.5740 9.6430 17 1 7.4225 -0.7423 8.9432 18 6 8.3984 -1.5262 10.7478 19 7 8.1613 -0.3806 11.6430 20 6 9.2517 0.4077 11.5510 21 8 9.3865 1.4477 12.1654 22 7 10.1692 -0.0837 10.7103 23 6 9.7689 -1.2483 10.1630 24 8 10.3784 -1.9318 9.3684 25 6 5.9130 -1.8011 10.1664 26 6 3.0975 -0.6497 3.3213 27 6 2.6389 -0.0079 2.1903 28 1 -0.3933 0.4418 -0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5880 2.4585 -1.2242 31 1 1.5616 2.4679 1.2085 32 1 1.1288 -2.6032 0.6420 33 1 1.9427 -3.7733 2.6455 34 1 3.1500 -3.7641 4.8268 35 1 4.2266 -0.9744 5.5007 36 1 5.3826 -1.0909 7.6475 37 1 7.5472 -3.7764 9.5900 38 1 7.6627 -2.9769 7.9625 39 1 8.4042 -2.4589 11.3120 40 1 7.3750 -0.2248 12.1892 41 1 11.0174 0.3458 10.5178 42 1 5.2916 -0.9060 10.1423 43 1 5.8751 -2.3170 11.1259 44 1 3.6459 -0.0993 4.0715 45 1 2.8290 1.0466 2.0550 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17522896_12360594.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:18:29 Heat of formation + Delta-G solvation = -33.709287 kcal Electronic energy + Delta-G solvation = -29790.902645 eV Core-core repulsion = 25356.127702 eV Total energy + Delta-G solvation = -4434.774943 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -43.51602 -41.32338 -40.62795 -39.77059 -39.38312 -37.90995 -37.18546 -35.21125 -35.08542 -34.01628 -32.27831 -31.40293 -29.65094 -27.31412 -26.98131 -25.42507 -24.19040 -23.92469 -23.67372 -22.66760 -22.12608 -20.67811 -20.43705 -19.46139 -18.76180 -18.61363 -18.02661 -17.79644 -17.47720 -17.31157 -16.96394 -16.69730 -16.55459 -16.29046 -16.00795 -15.89794 -15.53576 -15.45826 -15.25918 -15.08584 -14.80259 -14.43901 -14.26071 -14.06187 -13.90324 -13.74458 -13.64373 -13.54628 -13.03218 -12.81314 -12.35115 -12.32605 -12.11227 -11.90377 -11.74541 -11.70428 -11.48811 -11.33989 -11.24095 -10.98533 -10.64280 -10.57486 -10.16685 -10.03335 -9.29454 -5.04847 -0.58550 0.34073 0.45572 0.86943 1.18963 1.27190 1.51423 1.86985 1.88981 1.96336 2.03599 2.22791 2.68773 2.72391 3.11889 3.24802 3.33770 3.37837 3.49011 3.56715 3.66628 3.72672 3.75979 3.83419 4.03406 4.09315 4.10969 4.18547 4.22049 4.30210 4.41891 4.44704 4.46528 4.62547 4.68231 4.77059 4.86467 4.87597 4.90739 4.91210 5.03355 5.07833 5.32585 5.43290 5.46072 5.55436 5.59987 5.76884 5.82688 6.24499 6.34223 6.41500 7.01232 7.18608 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.080 4.080 3 Si 0.684 3.316 4 C -0.060 4.060 5 C -0.094 4.094 6 C -0.091 4.091 7 C -0.075 4.075 8 C -0.010 4.010 9 C -0.218 4.218 10 C 0.552 3.448 11 O -0.539 6.539 12 N -0.711 5.711 13 C 0.122 3.878 14 H 0.110 0.890 15 C -0.138 4.138 16 C -0.114 4.114 17 H 0.101 0.899 18 C 0.102 3.898 19 N -0.721 5.721 20 C 0.703 3.297 21 O -0.540 6.540 22 N -0.681 5.681 23 C 0.527 3.473 24 O -0.458 6.458 25 C -0.137 4.137 26 C -0.094 4.094 27 C -0.118 4.118 28 H 0.381 0.619 29 H 0.078 0.922 30 H -0.261 1.261 31 H -0.255 1.255 32 H 0.129 0.871 33 H 0.132 0.868 34 H 0.138 0.862 35 H 0.131 0.869 36 H 0.402 0.598 37 H 0.100 0.900 38 H 0.081 0.919 39 H 0.132 0.868 40 H 0.442 0.558 41 H 0.434 0.566 42 H 0.082 0.918 43 H 0.103 0.897 44 H 0.132 0.868 45 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.190 1.021 -1.789 2.068 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.189 4.189 3 Si 0.585 3.415 4 C -0.060 4.060 5 C -0.112 4.112 6 C -0.109 4.109 7 C -0.075 4.075 8 C -0.030 4.030 9 C -0.239 4.239 10 C 0.342 3.658 11 O -0.418 6.418 12 N -0.362 5.362 13 C 0.016 3.984 14 H 0.128 0.872 15 C -0.177 4.177 16 C -0.134 4.134 17 H 0.119 0.881 18 C -0.007 4.007 19 N -0.386 5.386 20 C 0.402 3.598 21 O -0.413 6.413 22 N -0.352 5.352 23 C 0.312 3.688 24 O -0.326 6.326 25 C -0.175 4.175 26 C -0.112 4.112 27 C -0.135 4.135 28 H 0.229 0.771 29 H 0.096 0.904 30 H -0.186 1.186 31 H -0.179 1.179 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.156 0.844 35 H 0.148 0.852 36 H 0.237 0.763 37 H 0.118 0.882 38 H 0.100 0.900 39 H 0.149 0.851 40 H 0.287 0.713 41 H 0.277 0.723 42 H 0.100 0.900 43 H 0.121 0.879 44 H 0.150 0.850 45 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.117 0.833 -1.210 1.474 hybrid contribution -0.878 0.704 -0.444 1.210 sum -0.995 1.537 -1.654 2.468 Atomic orbital electron populations 1.86590 1.17633 1.80193 1.49853 1.24850 0.84625 1.11118 0.98321 0.95028 0.91616 0.74545 0.80321 1.19428 0.97544 0.94120 0.94882 1.20976 0.98603 0.93793 0.97843 1.21444 0.96201 1.00198 0.93069 1.19054 0.99965 0.93631 0.94875 1.22418 0.90451 1.00002 0.90111 1.22849 1.04627 1.00895 0.95540 1.18337 0.77479 0.86767 0.83199 1.90845 1.57440 1.15261 1.78219 1.45538 1.56616 1.12981 1.21083 1.21783 0.95043 0.96878 0.84698 0.87170 1.23462 0.96216 0.95695 1.02338 1.22870 0.93789 1.00439 0.96289 0.88096 1.22181 0.93240 0.92746 0.92581 1.45600 1.20794 1.23901 1.48349 1.15961 0.80783 0.83347 0.79688 1.91099 1.79196 1.22566 1.48408 1.44362 1.22318 1.24972 1.43558 1.20794 0.87695 0.80189 0.80112 1.90890 1.60672 1.50685 1.30350 1.23362 0.94696 1.00723 0.98716 1.21326 0.98982 0.93603 0.97303 1.20935 0.99073 0.99649 0.93860 0.77105 0.90367 1.18572 1.17929 0.85292 0.84976 0.84402 0.85157 0.76345 0.88157 0.89977 0.85058 0.71268 0.72305 0.89972 0.87897 0.85003 0.85211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.37 12.81 -35.23 -0.45 -0.82 16 2 C -0.08 0.06 2.79 36.01 0.10 0.16 16 3 Si 0.68 -1.04 29.83 -169.99 -5.07 -6.12 16 4 C -0.06 -0.03 5.39 -104.50 -0.56 -0.59 16 5 C -0.09 -0.05 9.66 -39.65 -0.38 -0.43 16 6 C -0.09 -0.01 9.80 -39.11 -0.38 -0.39 16 7 C -0.08 0.00 5.87 -105.06 -0.62 -0.62 16 8 C -0.01 0.00 9.46 -37.16 -0.35 -0.35 16 9 C -0.22 0.20 9.41 -37.50 -0.35 -0.15 16 10 C 0.55 0.48 7.74 -12.96 -0.10 0.38 16 11 O -0.54 -2.66 15.83 5.19 0.08 -2.58 16 12 N -0.71 1.58 5.26 -54.40 -0.29 1.29 16 13 C 0.12 -0.32 4.32 -67.12 -0.29 -0.61 16 14 H 0.11 -0.09 7.47 -51.93 -0.39 -0.48 16 15 C -0.14 0.42 7.44 -25.92 -0.19 0.23 16 16 C -0.11 0.52 3.27 -89.81 -0.29 0.23 16 17 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 18 C 0.10 -0.42 3.40 -68.21 -0.23 -0.65 16 19 N -0.72 2.62 6.14 -59.10 -0.36 2.26 16 20 C 0.70 -0.13 9.00 -87.71 -0.79 -0.92 16 21 O -0.54 -2.26 18.04 5.33 0.10 -2.16 16 22 N -0.68 1.06 5.70 -15.71 -0.09 0.98 16 23 C 0.53 -0.68 8.14 -10.56 -0.09 -0.77 16 24 O -0.46 -0.89 18.02 5.59 0.10 -0.79 16 25 C -0.14 0.73 7.26 -25.92 -0.19 0.54 16 26 C -0.09 0.07 9.41 -39.11 -0.37 -0.30 16 27 C -0.12 0.04 8.65 -39.65 -0.34 -0.30 16 28 H 0.38 -1.23 8.74 45.56 0.40 -0.84 16 29 H 0.08 -0.18 7.96 -51.93 -0.41 -0.60 16 30 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 31 H -0.25 -0.37 7.04 56.52 0.40 0.02 16 32 H 0.13 -0.05 8.06 -52.49 -0.42 -0.48 16 33 H 0.13 -0.20 8.06 -52.49 -0.42 -0.63 16 34 H 0.14 0.07 7.52 -52.49 -0.39 -0.32 16 35 H 0.13 -0.47 6.07 -52.49 -0.32 -0.79 16 36 H 0.40 -1.89 8.68 -40.82 -0.35 -2.25 16 37 H 0.10 -0.38 8.00 -51.93 -0.42 -0.79 16 38 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 39 H 0.13 -0.76 8.01 -51.93 -0.42 -1.18 16 40 H 0.44 -2.36 8.96 -40.82 -0.37 -2.73 16 41 H 0.43 -1.17 8.96 -40.82 -0.37 -1.54 16 42 H 0.08 -0.45 8.14 -51.93 -0.42 -0.88 16 43 H 0.10 -0.66 8.10 -51.93 -0.42 -1.09 16 44 H 0.13 -0.42 6.17 -52.48 -0.32 -0.75 16 45 H 0.13 -0.26 4.84 -52.49 -0.25 -0.52 16 LS Contribution 386.84 15.07 5.83 5.83 Total: 0.00 -12.67 386.84 -10.93 -23.60 By element: Atomic # 1 Polarization: -11.61 SS G_CDS: -5.35 Total: -16.96 kcal Atomic # 6 Polarization: 0.89 SS G_CDS: -5.43 Total: -4.54 kcal Atomic # 7 Polarization: 5.26 SS G_CDS: -0.74 Total: 4.53 kcal Atomic # 8 Polarization: -6.17 SS G_CDS: -0.17 Total: -6.34 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.07 Total: -6.12 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -12.67 -10.93 -23.60 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_12360594.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.108 kcal (2) G-P(sol) polarization free energy of solvation -12.667 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.775 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.934 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.601 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.709 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds