Wall clock time and date at job start Sun Mar 7 2021 08:18:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86295 * 109.47297 * 2 1 4 4 C 1.50703 * 109.46965 * 240.00234 * 2 1 3 5 5 C 1.37814 * 119.93927 * 255.32594 * 4 2 1 6 6 C 1.39672 * 119.87681 * 180.29797 * 5 4 2 7 7 C 1.47730 * 120.11552 * 179.67374 * 6 5 4 8 8 O 1.21563 * 120.00145 * 359.72435 * 7 6 5 9 9 N 1.34777 * 119.99572 * 179.72130 * 7 6 5 10 10 C 1.46499 * 119.99665 * 179.72382 * 9 7 6 11 11 H 1.09002 * 112.85201 * 24.08188 * 10 9 7 12 12 C 1.53784 * 113.61491 * 155.28109 * 10 9 7 13 13 C 1.53777 * 87.08172 * 89.11442 * 12 10 9 14 14 H 1.08996 * 113.61378 * 270.80012 * 13 12 10 15 15 C 1.53000 * 113.61078 * 139.98329 * 13 12 10 16 16 N 1.47310 * 110.60022 * 296.46789 * 15 13 12 17 17 C 1.34875 * 106.43927 * 241.52272 * 16 15 13 18 18 O 1.21538 * 123.72748 * 179.97438 * 17 16 15 19 19 N 1.33791 * 112.49871 * 359.86536 * 17 16 15 20 20 C 1.34766 * 111.64799 * 0.08545 * 19 17 16 21 21 O 1.21228 * 127.15987 * 180.02562 * 20 19 17 22 22 C 1.53777 * 87.08146 * 25.43581 * 13 12 10 23 23 C 1.39631 * 119.76537 * 359.39516 * 6 5 4 24 24 C 1.37854 * 119.87873 * 0.28403 * 23 6 5 25 25 C 1.38636 * 120.11904 * 0.02562 * 24 23 6 26 26 F 1.35097 * 119.88174 * 179.97438 * 25 24 23 27 27 H 0.96703 * 113.99652 * 299.99309 * 1 2 3 28 28 H 1.09005 * 109.47384 * 120.00344 * 2 1 3 29 29 H 1.48498 * 110.00117 * 300.00209 * 3 2 1 30 30 H 1.48506 * 109.99808 * 61.32061 * 3 2 1 31 31 H 1.08000 * 120.06594 * 359.97438 * 5 4 2 32 32 H 0.97001 * 120.00485 * 0.02562 * 9 7 6 33 33 H 1.08999 * 113.61037 * 203.66621 * 12 10 9 34 34 H 1.09001 * 113.61313 * 334.56329 * 12 10 9 35 35 H 1.08998 * 110.54024 * 59.29942 * 15 13 12 36 36 H 0.96993 * 126.69323 * 61.44189 * 16 15 13 37 37 H 0.96995 * 124.17264 * 180.02562 * 19 17 16 38 38 H 1.08999 * 113.61239 * 220.01646 * 22 13 12 39 39 H 1.08999 * 113.61926 * 89.11880 * 22 13 12 40 40 H 1.07998 * 120.05858 * 180.29609 * 23 6 5 41 41 H 1.07997 * 119.93987 * 179.97438 * 24 23 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4458 -1.9847 -1.1272 6 6 2.9167 -2.6395 -2.2675 7 6 3.4759 -4.0027 -2.1617 8 8 3.5314 -4.5547 -1.0800 9 7 3.9244 -4.6345 -3.2645 10 6 4.4845 -5.9841 -3.1587 11 1 4.1236 -6.5248 -2.2837 12 6 4.3936 -6.7929 -4.4635 13 6 5.7613 -6.1968 -4.8360 14 1 5.6935 -5.2516 -5.3746 15 6 6.7033 -7.1975 -5.5084 16 7 7.0342 -8.2978 -4.5865 17 6 8.3695 -8.2528 -4.4021 18 8 8.9790 -9.0272 -3.6908 19 7 8.9484 -7.2627 -5.0911 20 6 8.0454 -6.5550 -5.7981 21 8 8.2614 -5.6028 -6.5167 22 6 6.0123 -6.0321 -3.3278 23 6 2.8517 -2.0032 -3.5088 24 6 2.3290 -0.7310 -3.6018 25 6 1.8689 -0.0831 -2.4658 26 9 1.3581 1.1638 -2.5624 27 1 -0.3933 0.4416 0.7651 28 1 1.7924 -0.5139 0.8900 29 1 1.5615 2.4679 -1.2084 30 1 1.5879 2.4585 1.2243 31 1 2.4896 -2.4742 -0.1655 32 1 3.8805 -4.1940 -4.1276 33 1 4.4145 -7.8719 -4.3106 34 1 3.5844 -6.4730 -5.1200 35 1 6.2582 -7.5856 -6.4245 36 1 6.4130 -8.9285 -4.1902 37 1 9.9003 -7.0767 -5.0820 38 1 6.5099 -5.0979 -3.0675 39 1 6.4758 -6.9030 -2.8646 40 1 3.2100 -2.5070 -4.3943 41 1 2.2787 -0.2378 -4.5613 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17522896_12496548.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:18:39 Heat of formation + Delta-G solvation = -77.560000 kcal Electronic energy + Delta-G solvation = -30160.741438 eV Core-core repulsion = 25538.374770 eV Total energy + Delta-G solvation = -4622.366669 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.116 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -50.33068 -43.65319 -41.64603 -40.38860 -39.71957 -39.13559 -37.77277 -37.15214 -35.26294 -34.19009 -32.94882 -31.93561 -29.80002 -27.11428 -27.06007 -25.88688 -24.60290 -23.83123 -23.44368 -22.69408 -21.67134 -20.63237 -19.36889 -19.06505 -18.89607 -18.63199 -18.18028 -17.93042 -17.82959 -17.27811 -17.00120 -16.89841 -16.70990 -16.29541 -16.10416 -15.74507 -15.63193 -15.44834 -15.35015 -15.13695 -15.03927 -14.76928 -14.64233 -14.12876 -13.88030 -13.80582 -13.60567 -13.33621 -12.92466 -12.73584 -12.38278 -12.33553 -11.93641 -11.74587 -11.50094 -11.34295 -11.30955 -11.12086 -10.80650 -10.66062 -10.32221 -10.18823 -9.84929 -4.97653 -0.54660 -0.07660 0.43216 1.18952 1.26665 1.52909 1.58731 1.82904 1.87648 1.93530 1.99077 2.46508 2.70521 2.97022 3.07455 3.10246 3.15294 3.31529 3.42106 3.47231 3.51663 3.59412 3.79765 3.85318 3.89852 4.04739 4.14051 4.15750 4.36473 4.37252 4.49804 4.56824 4.63700 4.68525 4.72273 4.77598 4.82126 4.89537 4.92454 5.00219 5.31940 5.51819 5.56613 5.75151 6.21863 6.25194 6.32438 6.99293 7.01831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.075 4.075 3 Si 0.672 3.328 4 C -0.115 4.115 5 C -0.009 4.009 6 C -0.149 4.149 7 C 0.567 3.433 8 O -0.527 6.527 9 N -0.710 5.710 10 C 0.125 3.875 11 H 0.111 0.889 12 C -0.135 4.135 13 C -0.117 4.117 14 H 0.116 0.884 15 C 0.102 3.898 16 N -0.721 5.721 17 C 0.704 3.296 18 O -0.538 6.538 19 N -0.679 5.679 20 C 0.530 3.470 21 O -0.463 6.463 22 C -0.151 4.151 23 C -0.052 4.052 24 C -0.157 4.157 25 C 0.137 3.863 26 F -0.117 7.117 27 H 0.383 0.617 28 H 0.082 0.918 29 H -0.227 1.227 30 H -0.264 1.264 31 H 0.150 0.850 32 H 0.401 0.599 33 H 0.100 0.900 34 H 0.085 0.915 35 H 0.134 0.866 36 H 0.442 0.558 37 H 0.435 0.565 38 H 0.077 0.923 39 H 0.099 0.901 40 H 0.138 0.862 41 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.748 0.040 -3.176 3.263 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.184 4.184 3 Si 0.571 3.429 4 C -0.116 4.116 5 C -0.028 4.028 6 C -0.153 4.153 7 C 0.355 3.645 8 O -0.403 6.403 9 N -0.362 5.362 10 C 0.019 3.981 11 H 0.129 0.871 12 C -0.173 4.173 13 C -0.136 4.136 14 H 0.134 0.866 15 C -0.008 4.008 16 N -0.387 5.387 17 C 0.404 3.596 18 O -0.410 6.410 19 N -0.351 5.351 20 C 0.315 3.685 21 O -0.331 6.331 22 C -0.190 4.190 23 C -0.070 4.070 24 C -0.176 4.176 25 C 0.117 3.883 26 F -0.096 7.096 27 H 0.232 0.768 28 H 0.100 0.900 29 H -0.150 1.150 30 H -0.189 1.189 31 H 0.167 0.833 32 H 0.237 0.763 33 H 0.118 0.882 34 H 0.104 0.896 35 H 0.152 0.848 36 H 0.288 0.712 37 H 0.277 0.723 38 H 0.096 0.904 39 H 0.117 0.883 40 H 0.156 0.844 41 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -0.486 0.308 -2.982 3.037 hybrid contribution -1.024 0.063 0.137 1.035 sum -1.509 0.371 -2.845 3.242 Atomic orbital electron populations 1.86598 1.17211 1.80204 1.50066 1.24662 0.84955 1.11406 0.97333 0.95486 0.91488 0.74958 0.80923 1.19222 1.03619 0.95671 0.93055 1.21007 0.91554 0.91057 0.99143 1.19884 1.05648 0.95269 0.94456 1.18093 0.77181 0.85197 0.84050 1.90824 1.55477 1.66925 1.27086 1.45546 1.63395 1.16852 1.10453 1.21751 0.93545 0.83085 0.99719 0.87106 1.23368 0.96339 1.00801 0.96821 1.22980 0.95096 0.98709 0.96852 0.86585 1.21974 0.94653 0.88593 0.95549 1.45621 1.07213 1.34707 1.51201 1.15927 0.82840 0.80870 0.80007 1.91108 1.66384 1.42840 1.40681 1.44340 1.13498 1.31552 1.45662 1.20759 0.87296 0.82156 0.78252 1.90881 1.83312 1.24226 1.34728 1.23579 0.97165 1.03931 0.94285 1.21161 0.95427 0.93753 0.96700 1.21112 1.02172 0.96032 0.98296 1.17902 0.95571 0.80677 0.94139 1.91573 1.84256 1.37412 1.96320 0.76838 0.89984 1.15048 1.18922 0.83259 0.76264 0.88191 0.89631 0.84828 0.71242 0.72272 0.90387 0.88263 0.84403 0.83464 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.71 12.86 -35.23 -0.45 -1.17 16 2 C -0.07 0.00 2.79 36.01 0.10 0.10 16 3 Si 0.67 -0.26 30.77 -169.99 -5.23 -5.49 16 4 C -0.11 -0.08 4.80 -104.61 -0.50 -0.58 16 5 C -0.01 0.00 9.21 -39.20 -0.36 -0.36 16 6 C -0.15 0.08 5.87 -104.96 -0.62 -0.53 16 7 C 0.57 0.19 7.77 -12.38 -0.10 0.10 16 8 O -0.53 -2.20 15.94 5.31 0.08 -2.11 16 9 N -0.71 2.12 5.21 -53.99 -0.28 1.84 16 10 C 0.12 -0.41 4.32 -67.12 -0.29 -0.70 16 11 H 0.11 -0.16 7.47 -51.93 -0.39 -0.54 16 12 C -0.14 0.82 7.31 -25.92 -0.19 0.63 16 13 C -0.12 0.63 3.52 -89.81 -0.32 0.31 16 14 H 0.12 -0.66 8.14 -51.93 -0.42 -1.08 16 15 C 0.10 -0.49 3.69 -68.20 -0.25 -0.74 16 16 N -0.72 2.97 4.52 -59.09 -0.27 2.70 16 17 C 0.70 -0.38 8.87 -87.71 -0.78 -1.16 16 18 O -0.54 -2.11 18.04 5.33 0.10 -2.01 16 19 N -0.68 1.28 5.70 -15.70 -0.09 1.19 16 20 C 0.53 -0.98 8.13 -10.55 -0.09 -1.06 16 21 O -0.46 -0.62 18.02 5.60 0.10 -0.52 16 22 C -0.15 0.52 7.26 -25.92 -0.19 0.33 16 23 C -0.05 0.14 9.54 -39.20 -0.37 -0.24 16 24 C -0.16 0.24 10.01 -39.57 -0.40 -0.16 16 25 C 0.14 0.11 6.67 -39.27 -0.26 -0.15 16 26 F -0.12 -0.30 12.83 2.25 0.03 -0.27 16 27 H 0.38 -1.00 8.74 45.56 0.40 -0.60 16 28 H 0.08 -0.15 7.77 -51.93 -0.40 -0.56 16 29 H -0.23 -0.59 5.33 56.52 0.30 -0.29 16 30 H -0.26 -0.43 7.11 56.52 0.40 -0.02 16 31 H 0.15 0.04 7.59 -52.49 -0.40 -0.36 16 32 H 0.40 -2.26 6.73 -40.82 -0.27 -2.54 16 33 H 0.10 -0.71 7.51 -51.93 -0.39 -1.10 16 34 H 0.09 -0.56 8.14 -51.93 -0.42 -0.98 16 35 H 0.13 -0.90 8.14 -51.93 -0.42 -1.32 16 36 H 0.44 -2.56 8.50 -40.82 -0.35 -2.91 16 37 H 0.43 -1.27 8.96 -40.82 -0.37 -1.63 16 38 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 39 H 0.10 -0.29 6.73 -51.93 -0.35 -0.64 16 40 H 0.14 -0.84 6.40 -52.49 -0.34 -1.18 16 41 H 0.15 -0.51 8.06 -52.49 -0.42 -0.93 16 LS Contribution 353.13 15.07 5.32 5.32 Total: 0.00 -12.43 353.13 -9.56 -21.99 By element: Atomic # 1 Polarization: -13.00 SS G_CDS: -4.27 Total: -17.27 kcal Atomic # 6 Polarization: 0.39 SS G_CDS: -4.61 Total: -4.22 kcal Atomic # 7 Polarization: 6.37 SS G_CDS: -0.64 Total: 5.74 kcal Atomic # 8 Polarization: -5.63 SS G_CDS: -0.17 Total: -5.80 kcal Atomic # 9 Polarization: -0.30 SS G_CDS: 0.03 Total: -0.27 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.23 Total: -5.49 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -12.43 -9.56 -21.99 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_12496548.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.573 kcal (2) G-P(sol) polarization free energy of solvation -12.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.998 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.562 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.987 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.560 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds