Wall clock time and date at job start Sun Mar 7 2021 08:20:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86299 * 109.47508 * 2 1 4 4 C 1.50702 * 109.47032 * 120.00162 * 2 1 3 5 5 C 1.34848 * 125.89007 * 244.95402 * 4 2 1 6 6 C 1.40889 * 107.41937 * 179.80359 * 5 4 2 7 7 C 1.34847 * 107.41625 * 0.38444 * 6 5 4 8 8 C 1.50701 * 125.89382 * 179.88570 * 7 6 5 9 9 C 1.50703 * 109.47262 * 274.68655 * 8 7 6 10 10 O 1.21286 * 119.99513 * 0.02562 * 9 8 7 11 11 N 1.34769 * 120.00205 * 179.97438 * 9 8 7 12 12 C 1.46501 * 120.00014 * 179.97438 * 11 9 8 13 13 H 1.09004 * 112.85074 * 336.20143 * 12 11 9 14 14 C 1.53782 * 113.61142 * 107.50467 * 12 11 9 15 15 C 1.53962 * 87.11063 * 89.18830 * 14 12 11 16 16 H 1.08993 * 113.61598 * 270.84305 * 15 14 12 17 17 C 1.52999 * 113.66529 * 139.88900 * 15 14 12 18 18 N 1.47307 * 110.60026 * 82.54966 * 17 15 14 19 19 C 1.34536 * 106.61798 * 118.52332 * 18 17 15 20 20 O 1.21534 * 123.77028 * 179.97438 * 19 18 17 21 21 N 1.33788 * 112.45503 * 0.02562 * 19 18 17 22 22 C 1.34763 * 111.64881 * 359.97438 * 21 19 18 23 23 O 1.21233 * 127.16172 * 180.02562 * 22 21 19 24 24 C 1.53781 * 113.61619 * 205.00312 * 12 11 9 25 25 N 1.36340 * 125.89459 * 64.99731 * 4 2 1 26 26 H 0.96704 * 113.99361 * 300.00057 * 1 2 3 27 27 H 1.09000 * 109.46869 * 239.99610 * 2 1 3 28 28 H 1.48502 * 110.00081 * 178.68256 * 3 2 1 29 29 H 1.48496 * 109.99668 * 300.00309 * 3 2 1 30 30 H 1.08001 * 126.29261 * 0.02562 * 5 4 2 31 31 H 1.08005 * 126.29708 * 180.23488 * 6 5 4 32 32 H 1.08999 * 109.47362 * 154.68464 * 8 7 6 33 33 H 1.09003 * 109.47088 * 34.68486 * 8 7 6 34 34 H 0.97001 * 120.00013 * 0.02562 * 11 9 8 35 35 H 1.08997 * 113.61668 * 203.66381 * 14 12 11 36 36 H 1.08998 * 113.61674 * 334.48890 * 14 12 11 37 37 H 1.09007 * 110.53881 * 319.72104 * 17 15 14 38 38 H 0.96996 * 126.69432 * 298.56846 * 18 17 15 39 39 H 0.97007 * 124.17438 * 179.97438 * 21 19 18 40 40 H 1.09002 * 113.61445 * 25.43587 * 24 12 11 41 41 H 1.09002 * 113.61408 * 156.25317 * 24 12 11 42 42 H 0.97004 * 125.63204 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 2.6308 -0.1489 2.2373 6 6 2.8942 -1.1596 3.1829 7 6 2.3529 -2.3021 2.7138 8 6 2.3932 -3.6446 3.3973 9 6 3.6798 -4.3476 3.0485 10 8 4.4849 -3.8109 2.3172 11 7 3.9361 -5.5720 3.5499 12 6 5.1866 -6.2555 3.2102 13 1 5.6192 -5.9056 2.2729 14 6 6.1927 -6.3121 4.3719 15 6 5.5222 -7.6349 4.7854 16 1 4.6837 -7.5043 5.4694 17 6 6.5110 -8.7048 5.2528 18 7 6.8701 -8.4966 6.6662 19 6 6.4684 -9.5950 7.3311 20 8 6.6142 -9.7516 8.5275 21 7 5.8915 -10.4961 6.5279 22 6 5.8581 -10.0729 5.2489 23 8 5.4009 -10.6633 4.2939 24 6 5.0994 -7.7873 3.3147 25 7 1.7576 -2.0320 1.5174 26 1 -0.3932 0.4417 0.7651 27 1 1.7923 -0.5139 -0.8900 28 1 3.5347 1.7702 0.0321 29 1 1.5615 2.4678 -1.2084 30 1 2.9307 0.8862 2.3078 31 1 3.4328 -1.0417 4.1116 32 1 1.5481 -4.2473 3.0646 33 1 2.3369 -3.5046 4.4768 34 1 3.2923 -6.0010 4.1350 35 1 7.2268 -6.4309 4.0485 36 1 6.0660 -5.5099 5.0988 37 1 7.4028 -8.7014 4.6260 38 1 7.3099 -7.7190 7.0440 39 1 5.5406 -11.3489 6.8291 40 1 4.0892 -8.1767 3.1888 41 1 5.8337 -8.3092 2.7011 42 1 1.2882 -2.6739 0.9619 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17522896_14644196.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:20:11 Heat of formation + Delta-G solvation = -34.525009 kcal Electronic energy + Delta-G solvation = -27931.471003 eV Core-core repulsion = 23687.687057 eV Total energy + Delta-G solvation = -4243.783945 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.136 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -43.56939 -42.32572 -41.23023 -39.82168 -39.32496 -37.68219 -37.22733 -35.14984 -34.19922 -33.00279 -31.88120 -29.92628 -29.08765 -27.05185 -25.66247 -24.87215 -23.82647 -22.73942 -22.32028 -21.31162 -21.01291 -20.66589 -19.52901 -18.91411 -18.37588 -18.05216 -17.74079 -17.41085 -17.13505 -16.74949 -16.59597 -16.36741 -16.24248 -15.98787 -15.68673 -15.28079 -15.18385 -15.02306 -14.52951 -14.42181 -14.15620 -14.07621 -13.92241 -13.76657 -13.71509 -13.40917 -12.91710 -12.76508 -12.34185 -12.02595 -11.95029 -11.91012 -11.80470 -11.51768 -11.22711 -10.98397 -10.67025 -10.61222 -10.22305 -9.73720 -8.92762 -4.96745 0.41803 1.13083 1.24788 1.27136 1.52529 1.72875 1.85013 1.86542 1.94111 1.99139 2.19709 2.48462 2.63950 3.09653 3.30062 3.37676 3.45828 3.54113 3.55378 3.59953 3.82232 3.85727 3.96589 4.01766 4.16264 4.29892 4.40893 4.42027 4.44743 4.56565 4.62885 4.67436 4.72664 4.80269 4.86306 4.87794 5.29683 5.33058 5.38213 5.57543 5.74708 6.03421 6.17568 6.20684 6.30968 6.52564 6.63711 6.98876 7.11720 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.050 4.050 3 Si 0.719 3.281 4 C -0.010 4.010 5 C -0.187 4.187 6 C -0.173 4.173 7 C 0.035 3.965 8 C -0.072 4.072 9 C 0.514 3.486 10 O -0.519 6.519 11 N -0.717 5.717 12 C 0.121 3.879 13 H 0.109 0.891 14 C -0.141 4.141 15 C -0.116 4.116 16 H 0.103 0.897 17 C 0.102 3.898 18 N -0.720 5.720 19 C 0.703 3.297 20 O -0.540 6.540 21 N -0.681 5.681 22 C 0.528 3.472 23 O -0.459 6.459 24 C -0.132 4.132 25 N -0.535 5.535 26 H 0.381 0.619 27 H 0.109 0.891 28 H -0.255 1.255 29 H -0.256 1.256 30 H 0.142 0.858 31 H 0.136 0.864 32 H 0.100 0.900 33 H 0.118 0.882 34 H 0.401 0.599 35 H 0.098 0.902 36 H 0.080 0.920 37 H 0.132 0.868 38 H 0.443 0.557 39 H 0.434 0.566 40 H 0.082 0.918 41 H 0.105 0.895 42 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.899 0.829 2.035 2.904 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.160 4.160 3 Si 0.620 3.380 4 C -0.123 4.123 5 C -0.212 4.212 6 C -0.197 4.197 7 C -0.079 4.079 8 C -0.112 4.112 9 C 0.300 3.700 10 O -0.393 6.393 11 N -0.370 5.370 12 C 0.015 3.985 13 H 0.127 0.873 14 C -0.180 4.180 15 C -0.136 4.136 16 H 0.121 0.879 17 C -0.007 4.007 18 N -0.386 5.386 19 C 0.402 3.598 20 O -0.413 6.413 21 N -0.352 5.352 22 C 0.313 3.687 23 O -0.327 6.327 24 C -0.170 4.170 25 N -0.130 5.130 26 H 0.229 0.771 27 H 0.127 0.873 28 H -0.179 1.179 29 H -0.181 1.181 30 H 0.160 0.840 31 H 0.154 0.846 32 H 0.119 0.881 33 H 0.136 0.864 34 H 0.236 0.764 35 H 0.117 0.883 36 H 0.098 0.902 37 H 0.150 0.850 38 H 0.288 0.712 39 H 0.277 0.723 40 H 0.100 0.900 41 H 0.124 0.876 42 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges -0.961 1.072 0.485 1.519 hybrid contribution -0.338 -1.474 0.331 1.548 sum -1.299 -0.402 0.816 1.586 Atomic orbital electron populations 1.86484 1.17396 1.81800 1.49504 1.24834 0.84885 1.10731 0.95576 0.94154 0.81058 0.76300 0.86525 1.20834 1.07214 0.84502 0.99750 1.20648 1.05441 0.99620 0.95456 1.20586 1.05760 0.91865 1.01517 1.19449 1.04208 0.95258 0.88975 1.20127 0.96261 0.92255 1.02595 1.20642 0.88422 0.80941 0.79989 1.90781 1.48204 1.64852 1.35481 1.45686 1.21165 1.18391 1.51716 1.21789 0.85083 0.92325 0.99260 0.87345 1.23524 0.99639 0.96049 0.98751 1.22943 0.98105 0.94575 0.97936 0.87883 1.22191 1.00094 0.93402 0.85060 1.45540 1.64374 1.20709 1.07931 1.15883 0.78171 0.80839 0.84926 1.91102 1.59825 1.78869 1.11479 1.44362 1.57929 1.22405 1.10519 1.20787 0.77946 0.87570 0.82441 1.90880 1.43138 1.61828 1.36875 1.23334 1.03844 0.95323 0.94541 1.41797 1.44228 1.09159 1.17821 0.77112 0.87315 1.17914 1.18092 0.84048 0.84578 0.88141 0.86400 0.76416 0.88344 0.90163 0.85038 0.71236 0.72300 0.89977 0.87640 0.75121 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.14 12.88 -35.23 -0.45 -0.59 16 2 C -0.05 -0.02 3.08 36.01 0.11 0.09 16 3 Si 0.72 -0.46 30.60 -169.99 -5.20 -5.66 16 4 C -0.01 -0.01 6.50 -81.79 -0.53 -0.54 16 5 C -0.19 -0.27 9.37 -39.78 -0.37 -0.64 16 6 C -0.17 -0.28 10.76 -39.78 -0.43 -0.71 16 7 C 0.03 0.02 5.66 -81.79 -0.46 -0.44 16 8 C -0.07 0.19 6.24 -29.03 -0.18 0.01 16 9 C 0.51 -0.21 7.82 -10.99 -0.09 -0.29 16 10 O -0.52 -2.32 15.63 5.55 0.09 -2.24 16 11 N -0.72 2.36 5.26 -53.01 -0.28 2.08 16 12 C 0.12 -0.37 4.32 -67.12 -0.29 -0.66 16 13 H 0.11 -0.09 7.47 -51.93 -0.39 -0.48 16 14 C -0.14 0.65 7.45 -25.82 -0.19 0.45 16 15 C -0.12 0.58 3.37 -89.71 -0.30 0.28 16 16 H 0.10 -0.52 8.14 -51.93 -0.42 -0.95 16 17 C 0.10 -0.45 3.44 -68.21 -0.23 -0.68 16 18 N -0.72 2.59 6.24 -59.19 -0.37 2.22 16 19 C 0.70 -0.20 8.99 -88.01 -0.79 -0.99 16 20 O -0.54 -2.23 18.04 5.34 0.10 -2.14 16 21 N -0.68 1.26 5.70 -15.79 -0.09 1.17 16 22 C 0.53 -0.96 8.00 -10.56 -0.08 -1.05 16 23 O -0.46 -0.47 17.48 5.60 0.10 -0.37 16 24 C -0.13 0.55 6.64 -25.92 -0.17 0.37 16 25 N -0.54 -0.41 6.07 -5.44 -0.03 -0.45 16 26 H 0.38 -1.32 8.70 45.56 0.40 -0.93 16 27 H 0.11 0.10 7.96 -51.93 -0.41 -0.31 16 28 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 29 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 30 H 0.14 -0.06 6.24 -52.49 -0.33 -0.39 16 31 H 0.14 0.06 8.06 -52.48 -0.42 -0.37 16 32 H 0.10 -0.48 8.14 -51.93 -0.42 -0.90 16 33 H 0.12 -0.57 8.14 -51.93 -0.42 -0.99 16 34 H 0.40 -2.34 8.70 -40.82 -0.36 -2.70 16 35 H 0.10 -0.52 8.03 -51.93 -0.42 -0.94 16 36 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 37 H 0.13 -0.78 8.05 -51.92 -0.42 -1.20 16 38 H 0.44 -2.26 8.96 -40.82 -0.37 -2.62 16 39 H 0.43 -1.29 8.96 -40.82 -0.37 -1.66 16 40 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 41 H 0.11 -0.43 8.10 -51.93 -0.42 -0.85 16 42 H 0.41 -0.32 8.96 -40.82 -0.37 -0.69 16 LS Contribution 362.71 15.07 5.47 5.47 Total: 0.00 -13.18 362.71 -9.87 -23.06 By element: Atomic # 1 Polarization: -12.59 SS G_CDS: -5.18 Total: -17.76 kcal Atomic # 6 Polarization: -0.78 SS G_CDS: -4.02 Total: -4.80 kcal Atomic # 7 Polarization: 5.80 SS G_CDS: -0.77 Total: 5.03 kcal Atomic # 8 Polarization: -5.16 SS G_CDS: -0.17 Total: -5.33 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.20 Total: -5.66 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -13.18 -9.87 -23.06 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_14644196.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.468 kcal (2) G-P(sol) polarization free energy of solvation -13.183 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.650 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.875 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.525 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds