Wall clock time and date at job start Sun Mar 7 2021 08:20:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47068 * 2 1 4 4 C 1.50700 * 109.47111 * 239.99436 * 2 1 3 5 5 C 1.38263 * 119.94880 * 300.00076 * 4 2 1 6 6 C 1.38142 * 120.05977 * 179.97438 * 5 4 2 7 7 C 1.38731 * 119.94054 * 359.97438 * 6 5 4 8 8 O 1.35901 * 120.05666 * 179.97438 * 7 6 5 9 9 C 1.42899 * 117.00383 * 180.02562 * 8 7 6 10 10 C 1.50695 * 109.47400 * 180.02562 * 9 8 7 11 11 O 1.21282 * 119.99917 * 359.97438 * 10 9 8 12 12 N 1.34772 * 120.00305 * 180.02562 * 10 9 8 13 13 C 1.46506 * 120.00033 * 179.97438 * 12 10 9 14 14 H 1.08992 * 112.90684 * 336.24748 * 13 12 10 15 15 C 1.54049 * 113.61276 * 107.61836 * 13 12 10 16 16 C 1.53781 * 87.08031 * 89.07129 * 15 13 12 17 17 H 1.09003 * 113.69043 * 270.86777 * 16 15 13 18 18 C 1.52991 * 113.61611 * 139.97702 * 16 15 13 19 19 N 1.47308 * 110.60143 * 196.67686 * 18 16 15 20 20 C 1.34534 * 106.61946 * 241.47319 * 19 18 16 21 21 O 1.21538 * 123.76806 * 180.02562 * 20 19 18 22 22 N 1.33783 * 112.45760 * 359.97438 * 20 19 18 23 23 C 1.34763 * 111.64621 * 0.02562 * 22 20 19 24 24 O 1.21237 * 127.16043 * 179.97438 * 23 22 20 25 25 C 1.53781 * 87.08070 * 25.42738 * 16 15 13 26 26 C 1.38735 * 119.89305 * 0.27903 * 7 6 5 27 27 C 1.38144 * 119.93739 * 359.46485 * 26 7 6 28 28 H 0.96701 * 113.99906 * 60.00068 * 1 2 3 29 29 H 1.09007 * 109.46955 * 120.00008 * 2 1 3 30 30 H 1.48499 * 110.00040 * 298.67803 * 3 2 1 31 31 H 1.48493 * 110.00575 * 60.00064 * 3 2 1 32 32 H 1.08002 * 119.97019 * 0.02690 * 5 4 2 33 33 H 1.07997 * 120.03003 * 179.97438 * 6 5 4 34 34 H 1.08997 * 109.47308 * 59.99850 * 9 8 7 35 35 H 1.09001 * 109.46756 * 299.99985 * 9 8 7 36 36 H 0.97002 * 120.00078 * 359.97438 * 12 10 9 37 37 H 1.09005 * 113.62125 * 334.52173 * 15 13 12 38 38 H 1.08996 * 113.68970 * 203.62749 * 15 13 12 39 39 H 1.09009 * 110.53789 * 319.67443 * 18 16 15 40 40 H 0.97005 * 126.69238 * 61.45030 * 19 18 16 41 41 H 0.97000 * 124.17761 * 180.02562 * 22 20 19 42 42 H 1.09002 * 113.61445 * 89.11830 * 25 16 15 43 43 H 1.09002 * 113.61408 * 219.93560 * 25 16 15 44 44 H 1.08000 * 120.03181 * 179.71826 * 26 7 6 45 45 H 1.08002 * 119.97153 * 180.27617 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 1.5967 -2.0343 -1.4480 6 6 2.0554 -2.6877 -2.5754 7 6 2.8522 -2.0143 -3.4899 8 8 3.3053 -2.6549 -4.5995 9 6 4.1213 -1.8996 -5.4970 10 6 4.5258 -2.7683 -6.6601 11 8 4.1525 -3.9209 -6.7147 12 7 5.3033 -2.2647 -7.6390 13 6 5.6970 -3.1094 -8.7694 14 1 5.6716 -4.1731 -8.5332 15 6 4.9826 -2.7504 -10.0862 16 6 6.1339 -1.7659 -10.3508 17 1 5.9614 -0.7702 -9.9420 18 6 6.5931 -1.7376 -11.8098 19 7 7.9170 -1.1018 -11.9244 20 6 7.7559 -0.0146 -12.7002 21 8 8.6588 0.7425 -12.9982 22 7 6.4910 0.1394 -13.1079 23 6 5.6937 -0.8388 -12.6351 24 8 4.5044 -0.9721 -12.8291 25 6 7.0012 -2.6602 -9.4492 26 6 3.1911 -0.6876 -3.2666 27 6 2.7253 -0.0372 -2.1404 28 1 -0.3933 0.4417 -0.7651 29 1 1.7924 -0.5139 0.8900 30 1 1.5879 2.4585 -1.2243 31 1 1.5616 2.4679 1.2084 32 1 0.9753 -2.5577 -0.7364 33 1 1.7941 -3.7218 -2.7447 34 1 5.0129 -1.5538 -4.9740 35 1 3.5591 -1.0408 -5.8637 36 1 5.6022 -1.3429 -7.5952 37 1 4.0175 -2.2649 -9.9412 38 1 4.9394 -3.5735 -10.7995 39 1 6.6121 -2.7456 -12.2244 40 1 8.7437 -1.4073 -11.5191 41 1 6.1856 0.8655 -13.6739 42 1 7.5108 -3.4594 -9.9874 43 1 7.6669 -2.1018 -8.7909 44 1 3.8150 -0.1625 -3.9748 45 1 2.9851 0.9969 -1.9683 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17522896_2989410.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:20:28 Heat of formation + Delta-G solvation = -80.948330 kcal Electronic energy + Delta-G solvation = -30943.645167 eV Core-core repulsion = 26316.365734 eV Total energy + Delta-G solvation = -4627.279433 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.140 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -43.59021 -41.72992 -41.11334 -39.90434 -39.59951 -38.86038 -37.28477 -37.18834 -35.22712 -34.23522 -32.45089 -31.80149 -30.31046 -29.14036 -27.07690 -26.31791 -25.33111 -24.10682 -23.83120 -22.76595 -22.58122 -21.95683 -20.77815 -19.60604 -19.51836 -18.55689 -18.30306 -18.08177 -17.83769 -17.55996 -17.38120 -17.02102 -16.90442 -16.59405 -16.45891 -16.21035 -15.93117 -15.86741 -15.62599 -15.42754 -15.24364 -15.03319 -14.70732 -14.36920 -14.33620 -13.91849 -13.78440 -13.74591 -13.49953 -13.41735 -12.91405 -12.40777 -12.29178 -12.20869 -12.14901 -11.98572 -11.79431 -11.66660 -11.53303 -11.30826 -11.03681 -10.71049 -10.61696 -10.34253 -10.08492 -9.27287 -5.00379 0.24096 0.25540 0.40643 1.22159 1.26079 1.28753 1.34154 1.55416 1.84746 1.91137 1.93745 2.40959 2.60988 2.62036 3.02194 3.25456 3.28380 3.32086 3.35999 3.44652 3.62012 3.62779 3.67388 3.80104 3.81050 3.82046 3.95572 4.12920 4.22107 4.32114 4.36970 4.39017 4.49795 4.51427 4.57447 4.61933 4.74794 4.79233 4.86502 4.90818 5.10166 5.20091 5.25962 5.46002 5.54477 5.63024 5.72516 6.09996 6.19489 6.26351 6.39097 6.94547 6.96697 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.070 4.070 3 Si 0.682 3.318 4 C -0.155 4.155 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.520 3.480 11 O -0.507 6.507 12 N -0.712 5.712 13 C 0.123 3.877 14 H 0.113 0.887 15 C -0.138 4.138 16 C -0.115 4.115 17 H 0.101 0.899 18 C 0.102 3.898 19 N -0.720 5.720 20 C 0.703 3.297 21 O -0.540 6.540 22 N -0.681 5.681 23 C 0.527 3.473 24 O -0.458 6.458 25 C -0.136 4.136 26 C -0.206 4.206 27 C -0.075 4.075 28 H 0.376 0.624 29 H 0.118 0.882 30 H -0.261 1.261 31 H -0.257 1.257 32 H 0.135 0.865 33 H 0.136 0.864 34 H 0.097 0.903 35 H 0.095 0.905 36 H 0.403 0.597 37 H 0.082 0.918 38 H 0.102 0.898 39 H 0.133 0.867 40 H 0.442 0.558 41 H 0.434 0.566 42 H 0.105 0.895 43 H 0.083 0.917 44 H 0.131 0.869 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.621 1.208 0.308 4.786 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.180 4.180 3 Si 0.583 3.417 4 C -0.155 4.155 5 C -0.069 4.069 6 C -0.163 4.163 7 C 0.088 3.912 8 O -0.200 6.200 9 C -0.039 4.039 10 C 0.304 3.696 11 O -0.380 6.380 12 N -0.366 5.366 13 C 0.018 3.982 14 H 0.131 0.869 15 C -0.177 4.177 16 C -0.135 4.135 17 H 0.119 0.881 18 C -0.007 4.007 19 N -0.385 5.385 20 C 0.402 3.598 21 O -0.413 6.413 22 N -0.353 5.353 23 C 0.312 3.688 24 O -0.326 6.326 25 C -0.174 4.174 26 C -0.225 4.225 27 C -0.093 4.093 28 H 0.223 0.777 29 H 0.136 0.864 30 H -0.186 1.186 31 H -0.182 1.182 32 H 0.153 0.847 33 H 0.154 0.846 34 H 0.115 0.885 35 H 0.113 0.887 36 H 0.237 0.763 37 H 0.100 0.900 38 H 0.120 0.880 39 H 0.150 0.850 40 H 0.287 0.713 41 H 0.277 0.723 42 H 0.123 0.877 43 H 0.101 0.899 44 H 0.149 0.851 45 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 4.017 0.938 0.548 4.162 hybrid contribution -0.581 0.831 -0.803 1.294 sum 3.437 1.769 -0.256 3.874 Atomic orbital electron populations 1.86602 1.17808 1.79909 1.49341 1.24959 0.83879 1.10754 0.98419 0.95134 0.91678 0.74633 0.80234 1.20207 1.01842 0.95489 0.98006 1.20867 0.96755 0.93421 0.95849 1.20538 1.00394 1.01298 0.94115 1.19072 0.94329 0.91078 0.86674 1.86171 1.64300 1.38551 1.30997 1.22456 0.96536 0.94481 0.90415 1.20036 0.78573 0.88085 0.82868 1.90801 1.52554 1.17543 1.77080 1.45464 1.52896 1.15708 1.22529 1.21863 0.94683 0.96704 0.84996 0.86942 1.23509 0.97976 0.98990 0.97223 1.22877 0.98613 1.00535 0.91448 0.88055 1.22182 0.82252 0.99085 0.97208 1.45526 1.11266 1.27532 1.54218 1.15877 0.82484 0.82179 0.79240 1.91104 1.42258 1.47085 1.60824 1.44370 1.10434 1.29840 1.50608 1.20795 0.87358 0.81617 0.79077 1.90893 1.12375 1.72181 1.57143 1.23370 0.96347 0.99715 0.97938 1.21163 1.06249 0.94199 1.00895 1.20788 0.96100 0.99219 0.93161 0.77662 0.86407 1.18592 1.18239 0.84720 0.84601 0.88535 0.88690 0.76261 0.89959 0.87971 0.84982 0.71282 0.72297 0.87711 0.89866 0.85075 0.85252 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.55 12.77 -35.23 -0.45 -1.00 16 2 C -0.07 0.04 2.82 36.01 0.10 0.14 16 3 Si 0.68 -0.94 29.78 -169.99 -5.06 -6.00 16 4 C -0.15 0.03 5.39 -104.60 -0.56 -0.53 16 5 C -0.05 -0.02 9.60 -39.61 -0.38 -0.40 16 6 C -0.14 -0.17 9.99 -39.43 -0.39 -0.56 16 7 C 0.13 0.13 6.69 -39.22 -0.26 -0.13 16 8 O -0.29 -0.53 9.67 -39.34 -0.38 -0.91 16 9 C 0.04 -0.09 5.22 36.00 0.19 0.10 16 10 C 0.52 -0.15 7.91 -10.99 -0.09 -0.24 16 11 O -0.51 -2.44 16.10 -14.35 -0.23 -2.67 16 12 N -0.71 2.73 5.26 -52.88 -0.28 2.45 16 13 C 0.12 -0.47 4.34 -66.97 -0.29 -0.76 16 14 H 0.11 -0.21 7.47 -51.93 -0.39 -0.60 16 15 C -0.14 0.55 7.45 -25.78 -0.19 0.36 16 16 C -0.12 0.64 3.26 -89.81 -0.29 0.35 16 17 H 0.10 -0.56 8.14 -51.93 -0.42 -0.98 16 18 C 0.10 -0.49 3.38 -68.21 -0.23 -0.72 16 19 N -0.72 3.10 6.15 -59.19 -0.36 2.74 16 20 C 0.70 -0.51 8.99 -88.02 -0.79 -1.31 16 21 O -0.54 -1.99 18.04 5.33 0.10 -1.90 16 22 N -0.68 1.40 5.70 -15.79 -0.09 1.31 16 23 C 0.53 -0.97 8.14 -10.55 -0.09 -1.06 16 24 O -0.46 -0.66 18.02 5.59 0.10 -0.56 16 25 C -0.14 0.88 7.29 -25.92 -0.19 0.69 16 26 C -0.21 0.22 9.04 -39.43 -0.36 -0.14 16 27 C -0.08 0.08 8.66 -39.60 -0.34 -0.26 16 28 H 0.38 -0.64 8.70 45.56 0.40 -0.24 16 29 H 0.12 -0.14 7.96 -51.93 -0.41 -0.56 16 30 H -0.26 -0.13 7.11 56.52 0.40 0.27 16 31 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 32 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 33 H 0.14 0.10 8.06 -52.49 -0.42 -0.32 16 34 H 0.10 -0.48 7.65 -51.93 -0.40 -0.87 16 35 H 0.10 -0.43 7.67 -51.93 -0.40 -0.83 16 36 H 0.40 -2.73 8.70 -40.82 -0.36 -3.09 16 37 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 38 H 0.10 -0.46 8.03 -51.93 -0.42 -0.87 16 39 H 0.13 -0.86 8.05 -51.92 -0.42 -1.27 16 40 H 0.44 -2.68 8.96 -40.82 -0.37 -3.04 16 41 H 0.43 -1.34 8.96 -40.82 -0.37 -1.71 16 42 H 0.10 -0.78 8.10 -51.93 -0.42 -1.20 16 43 H 0.08 -0.57 8.14 -51.93 -0.42 -1.00 16 44 H 0.13 -0.51 6.30 -52.49 -0.33 -0.84 16 45 H 0.13 -0.39 4.87 -52.49 -0.26 -0.64 16 LS Contribution 385.88 15.07 5.82 5.82 Total: 0.00 -13.77 385.88 -10.46 -24.23 By element: Atomic # 1 Polarization: -13.57 SS G_CDS: -5.44 Total: -19.01 kcal Atomic # 6 Polarization: -0.32 SS G_CDS: -4.17 Total: -4.49 kcal Atomic # 7 Polarization: 7.23 SS G_CDS: -0.73 Total: 6.50 kcal Atomic # 8 Polarization: -6.17 SS G_CDS: -0.86 Total: -7.03 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.06 Total: -6.00 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -13.77 -10.46 -24.23 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_2989410.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.721 kcal (2) G-P(sol) polarization free energy of solvation -13.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.492 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.456 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.227 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.948 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds