Wall clock time and date at job start Sun Mar 7 2021 08:20:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42889 * 1 3 3 Si 1.86307 * 109.47330 * 2 1 4 4 C 1.50701 * 109.47044 * 119.99785 * 2 1 3 5 5 C 1.38268 * 119.94550 * 65.00340 * 4 2 1 6 6 C 1.38138 * 120.05615 * 180.02562 * 5 4 2 7 7 C 1.38734 * 119.94757 * 359.97438 * 6 5 4 8 8 O 1.35899 * 120.06191 * 180.02562 * 7 6 5 9 9 C 1.42895 * 117.00337 * 180.02562 * 8 7 6 10 10 C 1.53003 * 109.47102 * 180.02562 * 9 8 7 11 11 C 1.50695 * 109.46978 * 179.97438 * 10 9 8 12 12 O 1.21276 * 120.00495 * 359.97438 * 11 10 9 13 13 N 1.34783 * 120.00151 * 179.97438 * 11 10 9 14 14 C 1.46499 * 120.00378 * 179.97438 * 13 11 10 15 15 H 1.08998 * 112.84635 * 336.19873 * 14 13 11 16 16 C 1.53782 * 113.68888 * 107.46446 * 14 13 11 17 17 C 1.53774 * 87.08337 * 89.12756 * 16 14 13 18 18 H 1.09005 * 113.69485 * 270.87335 * 17 16 14 19 19 C 1.52998 * 113.61698 * 139.97613 * 17 16 14 20 20 N 1.47319 * 110.59475 * 87.50551 * 19 17 16 21 21 C 1.34526 * 106.61635 * 241.47348 * 20 19 17 22 22 O 1.21543 * 123.76817 * 180.02562 * 21 20 19 23 23 N 1.33787 * 112.45950 * 0.26762 * 21 20 19 24 24 C 1.34769 * 111.64565 * 359.53813 * 23 21 20 25 25 O 1.21233 * 127.15754 * 180.14345 * 24 23 21 26 26 C 1.53780 * 113.61469 * 204.99841 * 14 13 11 27 27 C 1.38737 * 119.88783 * 0.28042 * 7 6 5 28 28 C 1.38151 * 119.94059 * 359.46853 * 27 7 6 29 29 H 0.96706 * 113.99997 * 60.00222 * 1 2 3 30 30 H 1.08995 * 109.47449 * 239.99462 * 2 1 3 31 31 H 1.48493 * 109.99863 * 59.99689 * 3 2 1 32 32 H 1.48499 * 109.99839 * 181.31882 * 3 2 1 33 33 H 1.07999 * 119.97033 * 359.97438 * 5 4 2 34 34 H 1.08003 * 120.03214 * 180.02562 * 6 5 4 35 35 H 1.08995 * 109.47650 * 59.99961 * 9 8 7 36 36 H 1.09004 * 109.47193 * 299.99928 * 9 8 7 37 37 H 1.08995 * 109.47274 * 59.99272 * 10 9 8 38 38 H 1.09004 * 109.46664 * 299.99794 * 10 9 8 39 39 H 0.97004 * 119.99490 * 359.97438 * 13 11 10 40 40 H 1.09000 * 113.61682 * 334.57877 * 16 14 13 41 41 H 1.09006 * 113.61349 * 203.67733 * 16 14 13 42 42 H 1.08993 * 110.65908 * 210.41696 * 19 17 16 43 43 H 0.96998 * 126.68994 * 61.45715 * 20 19 17 44 44 H 0.97006 * 124.18214 * 179.69195 * 23 21 20 45 45 H 1.08999 * 113.61416 * 156.24879 * 26 14 13 46 46 H 1.09002 * 113.61233 * 25.35151 * 26 14 13 47 47 H 1.07993 * 120.03106 * 179.72101 * 27 7 6 48 48 H 1.07998 * 119.97239 * 180.23543 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.6839 -2.0605 1.3973 6 6 2.1429 -2.7138 2.5246 7 6 2.8529 -2.0143 3.4896 8 8 3.3059 -2.6548 4.5993 9 6 4.0289 -1.8715 5.5509 10 6 4.4552 -2.7581 6.7227 11 6 5.2182 -1.9321 7.7259 12 8 5.4033 -0.7507 7.5235 13 7 5.6951 -2.5062 8.8483 14 6 6.4373 -1.7033 9.8233 15 1 6.8915 -0.8158 9.3827 16 6 5.6517 -1.4171 11.1140 17 6 6.2371 -2.7270 11.6675 18 1 5.6300 -3.6053 11.4480 19 6 6.6480 -2.6412 13.1388 20 7 5.5072 -2.9600 14.0148 21 6 5.2730 -1.8622 14.7562 22 8 4.3917 -1.7853 15.5897 23 7 6.1152 -0.8629 14.4700 24 6 6.9965 -1.2143 13.5129 25 8 7.8805 -0.5295 13.0444 26 6 7.4062 -2.5261 10.6888 27 6 3.0951 -0.6585 3.3225 28 6 2.6385 -0.0108 2.1909 29 1 -0.3933 0.4417 -0.7651 30 1 1.7923 -0.5139 -0.8899 31 1 1.5614 2.4679 1.2084 32 1 3.5346 1.7702 -0.0321 33 1 1.1308 -2.6045 0.6460 34 1 1.9499 -3.7685 2.6543 35 1 3.3924 -1.0660 5.9171 36 1 4.9137 -1.4478 5.0756 37 1 5.0918 -3.5633 6.3562 38 1 3.5707 -3.1820 7.1981 39 1 5.5468 -3.4510 9.0104 40 1 4.5701 -1.4438 10.9819 41 1 5.9926 -0.5280 11.6445 42 1 7.4863 -3.3070 13.3433 43 1 5.0199 -3.7980 14.0499 44 1 6.0955 0.0064 14.8999 45 1 8.2267 -1.9402 11.1030 46 1 7.7410 -3.4481 10.2133 47 1 3.6437 -0.1108 4.0744 48 1 2.8301 1.0437 2.0584 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17522896_4549602.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:20:32 Heat of formation + Delta-G solvation = -86.022671 kcal Electronic energy + Delta-G solvation = -32822.379343 eV Core-core repulsion = 28039.342251 eV Total energy + Delta-G solvation = -4783.037092 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.156 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -43.73135 -41.54779 -41.14326 -40.05079 -39.35100 -38.94436 -37.27357 -37.20677 -35.19441 -34.29531 -33.33110 -32.04022 -31.51806 -29.59161 -27.11289 -26.72031 -25.83783 -25.09556 -23.90929 -23.65083 -22.76775 -22.09877 -21.68042 -20.39777 -19.64137 -19.47428 -18.43410 -18.38012 -18.01343 -17.81179 -17.53703 -17.38183 -17.12195 -16.97712 -16.69389 -16.65863 -16.14245 -15.81888 -15.71408 -15.58087 -15.44853 -15.33706 -14.99879 -14.69989 -14.61488 -14.37753 -14.20310 -13.84155 -13.67802 -13.62563 -13.39979 -13.02903 -12.95926 -12.81202 -12.35568 -12.34623 -11.94098 -11.90740 -11.82971 -11.77724 -11.73937 -11.51908 -11.34691 -11.10554 -10.65507 -10.29689 -10.28859 -10.01154 -9.17002 -4.96231 0.30311 0.34180 0.40214 1.24910 1.30600 1.39483 1.56092 1.65466 1.86883 1.90028 1.99272 2.34471 2.65693 2.70653 3.05131 3.06786 3.36369 3.39444 3.44945 3.49697 3.71655 3.73860 3.75417 3.78947 3.85607 3.94022 4.00363 4.15335 4.21061 4.25775 4.33693 4.34813 4.42696 4.44581 4.51532 4.58990 4.59976 4.64884 4.66998 4.73130 4.81482 4.89039 4.95436 5.20118 5.29334 5.32142 5.52311 5.55792 5.71690 5.73899 6.18945 6.20229 6.34314 6.64567 6.97625 6.98234 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.065 4.065 3 Si 0.680 3.320 4 C -0.113 4.113 5 C -0.050 4.050 6 C -0.148 4.148 7 C 0.137 3.863 8 O -0.315 6.315 9 C 0.073 3.927 10 C -0.141 4.141 11 C 0.523 3.477 12 O -0.533 6.533 13 N -0.712 5.712 14 C 0.124 3.876 15 H 0.110 0.890 16 C -0.154 4.154 17 C -0.112 4.112 18 H 0.114 0.886 19 C 0.100 3.900 20 N -0.721 5.721 21 C 0.704 3.296 22 O -0.539 6.539 23 N -0.680 5.680 24 C 0.530 3.470 25 O -0.460 6.460 26 C -0.138 4.138 27 C -0.201 4.201 28 C -0.082 4.082 29 H 0.381 0.619 30 H 0.073 0.927 31 H -0.251 1.251 32 H -0.255 1.255 33 H 0.135 0.865 34 H 0.136 0.864 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.109 0.891 38 H 0.108 0.892 39 H 0.403 0.597 40 H 0.079 0.921 41 H 0.092 0.908 42 H 0.133 0.867 43 H 0.442 0.558 44 H 0.435 0.565 45 H 0.112 0.888 46 H 0.084 0.916 47 H 0.134 0.866 48 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.385 -4.912 -3.080 5.961 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.176 4.176 3 Si 0.581 3.419 4 C -0.114 4.114 5 C -0.068 4.068 6 C -0.167 4.167 7 C 0.092 3.908 8 O -0.229 6.229 9 C -0.003 4.003 10 C -0.180 4.180 11 C 0.310 3.690 12 O -0.409 6.409 13 N -0.364 5.364 14 C 0.019 3.981 15 H 0.128 0.872 16 C -0.193 4.193 17 C -0.132 4.132 18 H 0.132 0.868 19 C -0.009 4.009 20 N -0.387 5.387 21 C 0.403 3.597 22 O -0.412 6.412 23 N -0.352 5.352 24 C 0.316 3.684 25 O -0.329 6.329 26 C -0.176 4.176 27 C -0.219 4.219 28 C -0.099 4.099 29 H 0.229 0.771 30 H 0.091 0.909 31 H -0.176 1.176 32 H -0.180 1.180 33 H 0.153 0.847 34 H 0.154 0.846 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.127 0.873 38 H 0.127 0.873 39 H 0.238 0.762 40 H 0.097 0.903 41 H 0.110 0.890 42 H 0.150 0.850 43 H 0.287 0.713 44 H 0.278 0.722 45 H 0.130 0.870 46 H 0.103 0.897 47 H 0.152 0.848 48 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 2.114 -3.611 -2.032 4.652 hybrid contribution -0.144 -0.809 0.717 1.091 sum 1.970 -4.420 -1.315 5.015 Atomic orbital electron populations 1.86498 1.17342 1.81766 1.49654 1.24593 0.85589 1.10097 0.97346 0.95429 0.80803 0.78305 0.87344 1.19251 1.01525 0.94481 0.96118 1.20823 0.96219 0.93348 0.96436 1.20504 1.01620 1.00881 0.93695 1.18949 0.94268 0.90780 0.86800 1.85966 1.69164 1.38405 1.29320 1.22428 0.96452 0.93332 0.88089 1.21461 1.02220 0.99586 0.94778 1.20324 0.78847 0.88035 0.81825 1.90770 1.57450 1.16067 1.76591 1.45620 1.56865 1.13176 1.20735 1.21729 0.92597 0.95765 0.88037 0.87188 1.23642 1.01486 0.96945 0.97240 1.22908 0.99609 1.00412 0.90240 0.86808 1.22139 0.91362 0.95088 0.92316 1.45543 1.36144 1.16221 1.40744 1.15862 0.81442 0.80866 0.81542 1.91105 1.33221 1.81728 1.35158 1.44367 1.32822 1.18128 1.39870 1.20696 0.80452 0.89175 0.78085 1.90888 1.29491 1.58664 1.53851 1.23466 0.96958 1.01617 0.95596 1.21214 1.06399 0.94019 1.00308 1.20692 0.97319 0.98688 0.93248 0.77108 0.90876 1.17627 1.18018 0.84694 0.84603 0.90896 0.90863 0.87280 0.87345 0.76166 0.90256 0.88954 0.84960 0.71270 0.72248 0.86993 0.89713 0.84829 0.86233 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.39 12.81 -35.23 -0.45 -0.85 16 2 C -0.07 -0.04 2.79 36.01 0.10 0.06 16 3 Si 0.68 -0.21 29.85 -169.99 -5.07 -5.29 16 4 C -0.11 -0.34 5.39 -104.60 -0.56 -0.91 16 5 C -0.05 -0.12 9.68 -39.61 -0.38 -0.50 16 6 C -0.15 -0.35 9.99 -39.43 -0.39 -0.74 16 7 C 0.14 0.42 6.69 -39.21 -0.26 0.16 16 8 O -0.31 -0.65 10.14 -19.42 -0.20 -0.85 16 9 C 0.07 0.04 4.03 37.16 0.15 0.19 16 10 C -0.14 0.31 6.07 -27.88 -0.17 0.15 16 11 C 0.52 -0.16 7.83 -10.98 -0.09 -0.24 16 12 O -0.53 -2.19 15.58 5.56 0.09 -2.11 16 13 N -0.71 2.19 5.27 -53.02 -0.28 1.91 16 14 C 0.12 -0.26 4.32 -67.12 -0.29 -0.55 16 15 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 16 C -0.15 0.36 7.10 -25.92 -0.18 0.17 16 17 C -0.11 0.56 3.84 -89.81 -0.34 0.22 16 18 H 0.11 -0.78 8.14 -51.93 -0.42 -1.20 16 19 C 0.10 -0.44 3.82 -68.20 -0.26 -0.70 16 20 N -0.72 2.60 6.24 -59.19 -0.37 2.23 16 21 C 0.70 0.01 8.99 -88.02 -0.79 -0.78 16 22 O -0.54 -2.40 18.04 5.33 0.10 -2.30 16 23 N -0.68 1.00 5.70 -15.79 -0.09 0.91 16 24 C 0.53 -0.83 6.00 -10.56 -0.06 -0.89 16 25 O -0.46 -0.50 16.29 5.60 0.09 -0.41 16 26 C -0.14 0.60 7.24 -25.92 -0.19 0.41 16 27 C -0.20 -0.64 9.04 -39.43 -0.36 -0.99 16 28 C -0.08 -0.29 8.66 -39.60 -0.34 -0.63 16 29 H 0.38 -1.67 8.74 45.56 0.40 -1.27 16 30 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 31 H -0.25 -0.75 7.05 56.52 0.40 -0.35 16 32 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 33 H 0.14 0.08 8.06 -52.49 -0.42 -0.34 16 34 H 0.14 0.08 8.06 -52.48 -0.42 -0.34 16 35 H 0.07 0.08 7.61 -51.93 -0.40 -0.31 16 36 H 0.07 0.07 7.63 -51.93 -0.40 -0.33 16 37 H 0.11 -0.42 8.14 -51.93 -0.42 -0.85 16 38 H 0.11 -0.40 8.14 -51.93 -0.42 -0.83 16 39 H 0.40 -2.46 8.70 -40.82 -0.36 -2.82 16 40 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.09 -0.08 5.82 -51.93 -0.30 -0.38 16 42 H 0.13 -0.83 8.14 -51.93 -0.42 -1.26 16 43 H 0.44 -2.42 8.96 -40.82 -0.37 -2.79 16 44 H 0.43 -1.10 8.96 -40.82 -0.37 -1.46 16 45 H 0.11 -0.35 6.90 -51.93 -0.36 -0.71 16 46 H 0.08 -0.47 8.14 -51.93 -0.42 -0.90 16 47 H 0.13 0.27 6.30 -52.49 -0.33 -0.06 16 48 H 0.12 0.36 4.86 -52.49 -0.26 0.10 16 LS Contribution 400.42 15.07 6.03 6.03 Total: 0.00 -13.25 400.42 -10.69 -23.95 By element: Atomic # 1 Polarization: -11.52 SS G_CDS: -6.11 Total: -17.63 kcal Atomic # 6 Polarization: -1.16 SS G_CDS: -4.43 Total: -5.59 kcal Atomic # 7 Polarization: 5.78 SS G_CDS: -0.74 Total: 5.04 kcal Atomic # 8 Polarization: -6.14 SS G_CDS: -0.37 Total: -6.51 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: -5.07 Total: -5.29 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -13.25 -10.69 -23.95 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_4549602.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.077 kcal (2) G-P(sol) polarization free energy of solvation -13.254 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.331 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.691 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.946 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.023 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds