Wall clock time and date at job start Sun Mar 7 2021 08:21:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86296 * 109.47302 * 2 1 4 4 C 1.50706 * 109.46700 * 119.99776 * 2 1 3 5 5 C 1.38244 * 119.97449 * 245.01979 * 4 2 1 6 6 C 1.38280 * 120.11226 * 180.02562 * 5 4 2 7 7 C 1.38127 * 120.05697 * 359.67551 * 6 5 4 8 8 C 1.38749 * 119.93989 * 0.60151 * 7 6 5 9 9 O 1.35901 * 120.05424 * 179.69787 * 8 7 6 10 10 C 1.42904 * 116.99936 * 359.72306 * 9 8 7 11 11 C 1.50703 * 109.46869 * 180.02562 * 10 9 8 12 12 O 1.21280 * 120.00323 * 0.02562 * 11 10 9 13 13 N 1.34778 * 119.99817 * 179.97438 * 11 10 9 14 14 C 1.46499 * 119.99940 * 180.02562 * 13 11 10 15 15 H 1.09004 * 112.91032 * 23.75105 * 14 13 11 16 16 C 1.53784 * 113.61434 * 155.00095 * 14 13 11 17 17 C 1.53787 * 87.07923 * 89.11404 * 16 14 13 18 18 H 1.09000 * 113.61529 * 270.88430 * 17 16 14 19 19 C 1.53005 * 113.61178 * 140.06478 * 17 16 14 20 20 N 1.47307 * 110.59798 * 180.02562 * 19 17 16 21 21 C 1.34525 * 106.61989 * 118.52731 * 20 19 17 22 22 O 1.21540 * 123.77081 * 179.97438 * 21 20 19 23 23 N 1.33796 * 112.45708 * 359.97438 * 21 20 19 24 24 C 1.34764 * 111.64371 * 0.02562 * 23 21 20 25 25 O 1.21231 * 127.15875 * 180.02562 * 24 23 21 26 26 C 1.53779 * 113.61357 * 252.49697 * 14 13 11 27 27 C 1.38170 * 119.97190 * 64.99960 * 4 2 1 28 28 H 0.96700 * 113.99550 * 59.99689 * 1 2 3 29 29 H 1.09001 * 109.47164 * 239.99300 * 2 1 3 30 30 H 1.48498 * 110.00134 * 298.67656 * 3 2 1 31 31 H 1.48504 * 110.00337 * 59.99911 * 3 2 1 32 32 H 1.07999 * 119.94154 * 359.97438 * 5 4 2 33 33 H 1.08000 * 119.97079 * 179.97438 * 6 5 4 34 34 H 1.07998 * 120.03061 * 180.32001 * 7 6 5 35 35 H 1.08994 * 109.46996 * 60.00100 * 10 9 8 36 36 H 1.08990 * 109.47179 * 299.99909 * 10 9 8 37 37 H 0.97000 * 119.99785 * 0.02562 * 13 11 10 38 38 H 1.09004 * 113.61451 * 334.56890 * 16 14 13 39 39 H 1.08994 * 113.61477 * 203.66192 * 16 14 13 40 40 H 1.09001 * 110.53074 * 57.17011 * 19 17 16 41 41 H 0.97003 * 126.69113 * 298.49167 * 20 19 17 42 42 H 0.96993 * 124.17407 * 179.97438 * 23 21 20 43 43 H 1.09006 * 113.61307 * 156.33848 * 26 14 13 44 44 H 1.08999 * 113.69146 * 25.44334 * 26 14 13 45 45 H 1.08004 * 120.02791 * 0.04115 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 2.6383 -0.0116 2.1913 6 6 3.1009 -0.6607 3.3212 7 6 2.8517 -2.0081 3.4959 8 6 2.1474 -2.7129 2.5304 9 8 1.9062 -4.0399 2.6970 10 6 2.4125 -4.6469 3.8876 11 6 2.0515 -6.1100 3.8980 12 8 1.4232 -6.5862 2.9765 13 7 2.4280 -6.8895 4.9311 14 6 2.0776 -8.3120 4.9410 15 1 1.8985 -8.7119 3.9429 16 6 3.0275 -9.1744 5.7888 17 6 2.1009 -8.8831 6.9812 18 1 2.3680 -7.9810 7.5315 19 6 1.8775 -10.0912 7.8932 20 7 0.9827 -9.7396 9.0092 21 6 -0.1024 -10.5265 8.8949 22 8 -1.0444 -10.4939 9.6622 23 7 -0.0287 -11.3490 7.8422 24 6 1.1207 -11.1804 7.1592 25 8 1.4754 -11.7754 6.1643 26 6 0.9768 -8.6682 5.9540 27 6 1.6844 -2.0595 1.3978 28 1 -0.3932 0.4418 -0.7650 29 1 1.7924 -0.5139 -0.8899 30 1 1.5881 2.4585 -1.2243 31 1 1.5616 2.4679 1.2085 32 1 2.8303 1.0429 2.0587 33 1 3.6533 -0.1127 4.0701 34 1 3.2088 -2.5134 4.3810 35 1 1.9756 -4.1582 4.7584 36 1 3.4967 -4.5403 3.9169 37 1 2.9309 -6.5087 5.6679 38 1 4.0250 -8.7483 5.8968 39 1 3.0439 -10.2239 5.4949 40 1 2.8290 -10.4682 8.2682 41 1 1.1445 -9.0713 9.6934 42 1 -0.7172 -11.9882 7.6010 43 1 0.4327 -9.5793 5.7051 44 1 0.3179 -7.8343 6.1961 45 1 1.1323 -2.6051 0.6468 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17522896_4860298.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:21:20 Heat of formation + Delta-G solvation = -75.857670 kcal Electronic energy + Delta-G solvation = -31223.131654 eV Core-core repulsion = 26596.072969 eV Total energy + Delta-G solvation = -4627.058686 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.140 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -43.72161 -41.65483 -41.03688 -39.98181 -39.35320 -38.67116 -37.37650 -37.22727 -35.18504 -34.24126 -32.61251 -31.71618 -30.04551 -28.87099 -27.08432 -26.80871 -25.35753 -23.89419 -23.66412 -23.19003 -22.48617 -21.64858 -20.40033 -19.54949 -19.21963 -18.53879 -18.50847 -18.11170 -17.86891 -17.50728 -17.46141 -17.15777 -16.99740 -16.86199 -16.57628 -15.89477 -15.80755 -15.76727 -15.50979 -15.49015 -15.12690 -14.95635 -14.61946 -14.55874 -14.08106 -13.85153 -13.74590 -13.61378 -13.41474 -13.27082 -12.97521 -12.50265 -12.34619 -12.19046 -12.00440 -11.87646 -11.76863 -11.67116 -11.50822 -11.32141 -10.98161 -10.64217 -10.53731 -10.29646 -9.91451 -9.26425 -4.97775 0.20117 0.41489 0.41630 1.22062 1.26078 1.36591 1.38875 1.58588 1.88159 1.91342 1.93699 2.46024 2.62468 2.72111 3.06016 3.07843 3.31857 3.36597 3.38099 3.51544 3.69491 3.75947 3.76568 3.84738 3.86510 3.93828 4.03273 4.16395 4.20192 4.23023 4.35928 4.46002 4.50673 4.58769 4.62152 4.64803 4.68929 4.81704 4.90747 4.97072 5.22317 5.31709 5.35002 5.46864 5.56882 5.63852 5.75239 6.15787 6.20476 6.33357 6.42876 6.99490 6.99930 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.079 4.079 3 Si 0.689 3.311 4 C -0.033 4.033 5 C -0.151 4.151 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.128 3.872 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.518 3.482 12 O -0.506 6.506 13 N -0.712 5.712 14 C 0.127 3.873 15 H 0.111 0.889 16 C -0.139 4.139 17 C -0.113 4.113 18 H 0.114 0.886 19 C 0.100 3.900 20 N -0.721 5.721 21 C 0.704 3.296 22 O -0.539 6.539 23 N -0.681 5.681 24 C 0.530 3.470 25 O -0.459 6.459 26 C -0.153 4.153 27 C -0.119 4.119 28 H 0.381 0.619 29 H 0.079 0.921 30 H -0.261 1.261 31 H -0.255 1.255 32 H 0.130 0.870 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.095 0.905 36 H 0.096 0.904 37 H 0.403 0.597 38 H 0.085 0.915 39 H 0.115 0.885 40 H 0.133 0.867 41 H 0.442 0.558 42 H 0.435 0.565 43 H 0.090 0.910 44 H 0.080 0.920 45 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.340 2.911 3.150 9.378 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.189 4.189 3 Si 0.590 3.410 4 C -0.033 4.033 5 C -0.169 4.169 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.083 3.917 9 O -0.201 6.201 10 C -0.037 4.037 11 C 0.303 3.697 12 O -0.379 6.379 13 N -0.365 5.365 14 C 0.021 3.979 15 H 0.129 0.871 16 C -0.178 4.178 17 C -0.132 4.132 18 H 0.132 0.868 19 C -0.009 4.009 20 N -0.386 5.386 21 C 0.403 3.597 22 O -0.412 6.412 23 N -0.352 5.352 24 C 0.315 3.685 25 O -0.328 6.328 26 C -0.191 4.191 27 C -0.138 4.138 28 H 0.229 0.771 29 H 0.097 0.903 30 H -0.186 1.186 31 H -0.180 1.180 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.148 0.852 35 H 0.113 0.887 36 H 0.114 0.886 37 H 0.237 0.763 38 H 0.103 0.897 39 H 0.133 0.867 40 H 0.151 0.849 41 H 0.287 0.713 42 H 0.278 0.722 43 H 0.109 0.891 44 H 0.099 0.901 45 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 7.393 2.689 2.748 8.333 hybrid contribution -1.028 0.026 0.413 1.109 sum 6.365 2.715 3.161 7.607 Atomic orbital electron populations 1.86604 1.17559 1.80216 1.49783 1.24866 0.84698 1.11176 0.98133 0.94964 0.91598 0.74259 0.80190 1.19029 0.96760 0.92723 0.94792 1.20931 1.01413 0.99832 0.94719 1.20877 0.97692 0.93584 0.96910 1.21276 1.04858 0.96080 1.00246 1.18990 0.95540 0.82360 0.94809 1.86170 1.73836 1.20141 1.39943 1.22439 1.00750 0.91631 0.88924 1.20072 0.79695 0.87535 0.82397 1.90805 1.37602 1.74576 1.34928 1.45463 1.58475 1.09177 1.23427 1.21731 0.95329 0.80101 1.00706 0.87066 1.23507 0.98115 1.02513 0.93617 1.22919 0.98961 0.96838 0.94521 0.86817 1.22116 0.96007 0.95015 0.87755 1.45524 1.19347 1.42443 1.31312 1.15861 0.83446 0.79393 0.81004 1.91104 1.34354 1.70728 1.45030 1.44364 1.22909 1.39519 1.28403 1.20697 0.81565 0.82929 0.83281 1.90880 1.70752 1.49149 1.22039 1.23599 0.96815 1.03028 0.95697 1.20252 1.02488 0.93723 0.97314 0.77120 0.90296 1.18631 1.17955 0.85278 0.84988 0.85218 0.88738 0.88581 0.76278 0.89668 0.86707 0.84939 0.71289 0.72243 0.89146 0.90140 0.84753 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.99 12.81 -35.23 -0.45 -1.44 16 2 C -0.08 -0.03 2.79 36.01 0.10 0.07 16 3 Si 0.69 -0.62 29.85 -169.99 -5.07 -5.70 16 4 C -0.03 -0.06 5.38 -104.64 -0.56 -0.62 16 5 C -0.15 -0.06 8.67 -39.56 -0.34 -0.40 16 6 C -0.07 0.04 10.04 -39.61 -0.40 -0.36 16 7 C -0.21 0.06 9.04 -39.43 -0.36 -0.30 16 8 C 0.13 0.28 6.69 -39.22 -0.26 0.02 16 9 O -0.29 -0.85 9.67 -39.34 -0.38 -1.23 16 10 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 11 C 0.52 0.33 7.91 -10.98 -0.09 0.24 16 12 O -0.51 -3.07 16.10 -14.35 -0.23 -3.30 16 13 N -0.71 2.18 5.26 -53.01 -0.28 1.90 16 14 C 0.13 -0.26 4.32 -67.12 -0.29 -0.55 16 15 H 0.11 0.07 7.47 -51.93 -0.39 -0.31 16 16 C -0.14 0.61 7.22 -25.91 -0.19 0.43 16 17 C -0.11 0.59 3.83 -89.80 -0.34 0.24 16 18 H 0.11 -0.83 8.14 -51.93 -0.42 -1.25 16 19 C 0.10 -0.46 3.83 -68.20 -0.26 -0.72 16 20 N -0.72 2.69 6.24 -59.19 -0.37 2.33 16 21 C 0.70 -0.05 8.99 -88.02 -0.79 -0.84 16 22 O -0.54 -2.37 18.04 5.33 0.10 -2.28 16 23 N -0.68 1.04 5.70 -15.79 -0.09 0.95 16 24 C 0.53 -0.89 5.93 -10.56 -0.06 -0.95 16 25 O -0.46 -0.44 16.21 5.60 0.09 -0.35 16 26 C -0.15 0.36 7.15 -25.92 -0.19 0.18 16 27 C -0.12 -0.35 9.62 -39.43 -0.38 -0.73 16 28 H 0.38 -0.87 8.74 45.56 0.40 -0.47 16 29 H 0.08 -0.09 7.96 -51.93 -0.41 -0.51 16 30 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 31 H -0.25 -0.52 7.05 56.52 0.40 -0.13 16 32 H 0.13 -0.17 4.86 -52.49 -0.26 -0.42 16 33 H 0.13 -0.41 8.06 -52.49 -0.42 -0.84 16 34 H 0.13 -0.43 6.30 -52.49 -0.33 -0.76 16 35 H 0.09 -0.37 7.65 -51.93 -0.40 -0.77 16 36 H 0.10 -0.41 7.67 -51.93 -0.40 -0.81 16 37 H 0.40 -2.68 8.70 -40.82 -0.36 -3.03 16 38 H 0.08 -0.50 8.14 -51.93 -0.42 -0.92 16 39 H 0.11 -0.34 6.46 -51.93 -0.34 -0.68 16 40 H 0.13 -0.87 8.14 -51.93 -0.42 -1.29 16 41 H 0.44 -2.49 8.96 -40.82 -0.37 -2.86 16 42 H 0.43 -1.11 8.96 -40.82 -0.37 -1.48 16 43 H 0.09 -0.09 6.15 -51.93 -0.32 -0.41 16 44 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.13 0.44 8.06 -52.48 -0.42 0.02 16 LS Contribution 379.26 15.07 5.72 5.72 Total: 0.00 -14.44 379.26 -10.46 -24.90 By element: Atomic # 1 Polarization: -12.09 SS G_CDS: -5.26 Total: -17.35 kcal Atomic # 6 Polarization: 0.07 SS G_CDS: -4.22 Total: -4.15 kcal Atomic # 7 Polarization: 5.92 SS G_CDS: -0.74 Total: 5.18 kcal Atomic # 8 Polarization: -7.72 SS G_CDS: -0.88 Total: -8.60 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.07 Total: -5.70 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -14.44 -10.46 -24.90 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_4860298.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.956 kcal (2) G-P(sol) polarization free energy of solvation -14.443 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.399 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.459 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.902 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.858 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds