Wall clock time and date at job start Sun Mar 7 2021 08:21:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35964 * 116.99806 * 2 1 4 4 C 1.39451 * 120.11833 * 180.02562 * 3 2 1 5 5 O 1.34776 * 133.24407 * 0.33488 * 4 3 2 6 6 C 1.34922 * 110.84199 * 180.12402 * 5 4 3 7 7 C 1.46995 * 125.13936 * 179.85253 * 6 5 4 8 8 O 1.21653 * 119.99908 * 179.69180 * 7 6 5 9 9 N 1.34769 * 120.00015 * 359.68531 * 7 6 5 10 10 C 1.46501 * 120.00014 * 179.97438 * 9 7 6 11 11 H 1.09004 * 112.85074 * 336.20143 * 10 9 7 12 12 C 1.53782 * 113.61142 * 107.50467 * 10 9 7 13 13 C 1.53962 * 87.11063 * 89.18830 * 12 10 9 14 14 H 1.08993 * 113.61598 * 270.84305 * 13 12 10 15 15 C 1.52999 * 113.66529 * 139.88900 * 13 12 10 16 16 N 1.47313 * 110.59829 * 196.72935 * 15 13 12 17 17 C 1.34529 * 106.61349 * 241.47540 * 16 15 13 18 18 O 1.21539 * 123.76898 * 179.97438 * 17 16 15 19 19 N 1.33786 * 112.46190 * 359.97438 * 17 16 15 20 20 C 1.34774 * 111.64478 * 0.02562 * 19 17 16 21 21 O 1.21232 * 127.15661 * 180.02562 * 20 19 17 22 22 C 1.53781 * 113.61619 * 205.00312 * 10 9 7 23 23 C 1.35810 * 109.72132 * 359.57873 * 6 5 4 24 24 C 1.40608 * 119.13494 * 180.02562 * 4 3 2 25 25 C 1.39784 * 120.12094 * 359.97438 * 24 4 3 26 26 C 1.50696 * 120.09124 * 179.97438 * 25 24 4 27 27 O 1.42902 * 109.47006 * 75.00317 * 26 25 24 28 28 Si 1.86305 * 109.47031 * 194.99769 * 26 25 24 29 29 C 1.36633 * 119.80920 * 359.97438 * 25 24 4 30 30 C 1.38256 * 120.12405 * 0.02562 * 3 2 1 31 31 H 1.09001 * 109.47040 * 179.97438 * 1 2 3 32 32 H 1.09001 * 109.46512 * 299.99916 * 1 2 3 33 33 H 1.09001 * 109.46861 * 59.99694 * 1 2 3 34 34 H 0.97001 * 120.00013 * 0.02562 * 9 7 6 35 35 H 1.08997 * 113.61668 * 203.66381 * 12 10 9 36 36 H 1.08998 * 113.61674 * 334.48890 * 12 10 9 37 37 H 1.09007 * 110.53881 * 319.72104 * 15 13 12 38 38 H 0.96992 * 126.69559 * 61.44649 * 16 15 13 39 39 H 0.97004 * 124.17936 * 180.02562 * 19 17 16 40 40 H 1.09002 * 113.61445 * 25.43587 * 22 10 9 41 41 H 1.09002 * 113.61408 * 156.25317 * 22 10 9 42 42 H 1.08004 * 126.96137 * 180.22313 * 23 6 5 43 43 H 1.08997 * 109.47403 * 314.99945 * 26 25 24 44 44 H 0.96699 * 114.00386 * 59.99337 * 27 26 25 45 45 H 1.48495 * 109.99651 * 58.67995 * 28 26 25 46 46 H 1.48492 * 109.99968 * 180.02562 * 28 26 25 47 47 H 1.08003 * 119.74578 * 179.97438 * 29 25 24 48 48 H 1.08006 * 119.66207 * 359.97438 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 3.4387 1.2874 -0.0005 5 8 4.4142 0.3573 -0.0069 6 6 5.6317 0.9386 -0.0015 7 6 6.9131 0.2184 -0.0029 8 8 7.9596 0.8388 -0.0033 9 7 6.9287 -1.1292 -0.0036 10 6 8.2058 -1.8470 -0.0055 11 1 9.0246 -1.2530 -0.4116 12 6 8.5367 -2.5189 1.3376 13 6 7.7823 -3.7555 0.8160 14 1 6.7162 -3.7442 1.0423 15 6 8.4538 -5.0821 1.1770 16 7 7.9302 -6.1734 0.3373 17 6 7.3549 -7.0583 1.1714 18 8 6.8198 -8.0852 0.8024 19 7 7.4376 -6.6816 2.4525 20 6 8.0796 -5.5039 2.5840 21 8 8.3104 -4.9067 3.6134 22 6 8.1164 -3.2617 -0.6016 23 6 5.4945 2.2898 -0.0007 24 6 4.0554 2.5510 0.0000 25 6 3.2765 3.7117 0.0006 26 6 3.9382 5.0656 0.0017 27 8 4.4610 5.3414 -1.2993 28 14 2.6863 6.3682 0.4568 29 6 1.9136 3.6151 0.0000 30 6 1.2958 2.3726 0.0005 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3632 0.5138 0.8900 33 1 -0.3633 0.5139 -0.8900 34 1 6.0943 -1.6239 -0.0035 35 1 9.6024 -2.6910 1.4889 36 1 8.0592 -2.0424 2.1937 37 1 9.5363 -5.0028 1.0757 38 1 7.9885 -6.2406 -0.6285 39 1 7.0797 -7.1930 3.1951 40 1 7.2983 -3.3857 -1.3112 41 1 9.0669 -3.6362 -0.9818 42 1 6.2874 3.0231 -0.0002 43 1 4.7503 5.0726 0.7287 44 1 3.7925 5.3511 -1.9979 45 1 2.1117 6.0750 1.7943 46 1 3.3262 7.7082 0.4609 47 1 1.3128 4.5126 0.0009 48 1 0.2174 2.3120 0.0005 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17522896_6672420.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:21:54 Heat of formation + Delta-G solvation = -72.868327 kcal Electronic energy + Delta-G solvation = -37422.095278 eV Core-core repulsion = 32220.031747 eV Total energy + Delta-G solvation = -5202.063531 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.140 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -43.71512 -43.52677 -41.37465 -40.67703 -39.76713 -39.37589 -39.10857 -37.19337 -37.03555 -35.20240 -34.16827 -33.60368 -31.94988 -31.05486 -29.68519 -28.70083 -27.03023 -26.45311 -25.84665 -24.56961 -23.98444 -23.77506 -22.68682 -22.18509 -21.71833 -20.70163 -19.88782 -19.45369 -19.03752 -18.61390 -18.02727 -17.84063 -17.81087 -17.68396 -17.34295 -17.03412 -16.92053 -16.70282 -16.53024 -16.25945 -16.20715 -15.87730 -15.82142 -15.64592 -15.40687 -15.15111 -14.78637 -14.65201 -14.43168 -14.28845 -14.09011 -13.79323 -13.63396 -13.61780 -13.48031 -13.37966 -12.85461 -12.58981 -12.41261 -12.35957 -12.11312 -11.94200 -11.92586 -11.73632 -11.49591 -11.47855 -11.25240 -10.98032 -10.65559 -10.48652 -10.34624 -9.81486 -9.02653 -5.10413 -0.63490 0.08089 0.46159 0.66149 1.18937 1.25432 1.28117 1.59812 1.82816 1.90239 1.93673 1.96585 1.98330 2.00934 2.37090 2.67832 3.07637 3.15993 3.31560 3.35837 3.38515 3.49705 3.50003 3.59426 3.68920 3.79312 3.83039 3.95562 4.01787 4.05134 4.06251 4.13991 4.18395 4.38320 4.41124 4.41995 4.42565 4.42925 4.55211 4.63439 4.77796 4.80785 4.84479 4.84529 4.91798 5.02683 5.18677 5.23093 5.31366 5.58619 5.60058 5.77905 6.10010 6.24504 6.25121 6.53731 6.85032 7.02122 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.150 3.850 4 C 0.047 3.953 5 O -0.174 6.174 6 C -0.026 4.026 7 C 0.607 3.393 8 O -0.505 6.505 9 N -0.702 5.702 10 C 0.120 3.880 11 H 0.115 0.885 12 C -0.137 4.137 13 C -0.116 4.116 14 H 0.102 0.898 15 C 0.103 3.897 16 N -0.720 5.720 17 C 0.703 3.297 18 O -0.540 6.540 19 N -0.681 5.681 20 C 0.527 3.473 21 O -0.458 6.458 22 C -0.136 4.136 23 C -0.101 4.101 24 C -0.083 4.083 25 C -0.098 4.098 26 C -0.066 4.066 27 O -0.535 6.535 28 Si 0.686 3.314 29 C -0.087 4.087 30 C -0.177 4.177 31 H 0.105 0.895 32 H 0.061 0.939 33 H 0.061 0.939 34 H 0.409 0.591 35 H 0.103 0.897 36 H 0.083 0.917 37 H 0.133 0.867 38 H 0.442 0.558 39 H 0.434 0.566 40 H 0.084 0.916 41 H 0.106 0.894 42 H 0.175 0.825 43 H 0.114 0.886 44 H 0.379 0.621 45 H -0.255 1.255 46 H -0.252 1.252 47 H 0.141 0.859 48 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.819 1.148 -3.346 5.978 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.002 4.002 5 O -0.076 6.076 6 C -0.076 4.076 7 C 0.393 3.607 8 O -0.381 6.381 9 N -0.353 5.353 10 C 0.014 3.986 11 H 0.133 0.867 12 C -0.176 4.176 13 C -0.136 4.136 14 H 0.120 0.880 15 C -0.007 4.007 16 N -0.385 5.385 17 C 0.402 3.598 18 O -0.413 6.413 19 N -0.353 5.353 20 C 0.312 3.688 21 O -0.326 6.326 22 C -0.174 4.174 23 C -0.122 4.122 24 C -0.084 4.084 25 C -0.099 4.099 26 C -0.177 4.177 27 O -0.341 6.341 28 Si 0.587 3.413 29 C -0.105 4.105 30 C -0.196 4.196 31 H 0.124 0.876 32 H 0.079 0.921 33 H 0.080 0.920 34 H 0.244 0.756 35 H 0.122 0.878 36 H 0.101 0.899 37 H 0.151 0.849 38 H 0.287 0.713 39 H 0.277 0.723 40 H 0.102 0.898 41 H 0.124 0.876 42 H 0.192 0.808 43 H 0.131 0.869 44 H 0.226 0.774 45 H -0.179 1.179 46 H -0.177 1.177 47 H 0.158 0.842 48 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -3.798 1.576 -2.118 4.626 hybrid contribution -0.452 -0.894 0.218 1.025 sum -4.251 0.682 -1.901 4.706 Atomic orbital electron populations 1.23199 0.77250 1.04797 1.01829 1.86174 1.22213 1.25662 1.88373 1.17735 0.86484 0.85913 0.99470 1.18779 0.87455 0.86942 1.06997 1.84042 1.12647 1.34735 1.76173 1.21907 0.83863 0.92575 1.09280 1.16576 0.85469 0.81993 0.76698 1.90931 1.30300 1.67363 1.49475 1.45551 1.09693 1.05642 1.74395 1.21890 0.86752 0.92689 0.97219 0.86680 1.23492 1.01817 0.94192 0.98108 1.22922 1.00944 0.91363 0.98380 0.87990 1.22171 1.01894 0.88900 0.87685 1.45519 1.61194 1.21920 1.09880 1.15873 0.79229 0.83586 0.81069 1.91100 1.47500 1.24620 1.78098 1.44369 1.56099 1.24344 1.10440 1.20793 0.76493 0.80254 0.91284 1.90888 1.51839 1.56909 1.32963 1.23368 1.03978 0.94491 0.95528 1.22762 0.94814 0.94320 1.00309 1.19407 0.92623 0.92086 1.04275 1.19497 0.92919 0.94467 1.03013 1.25063 1.05485 0.97748 0.89360 1.86543 1.38153 1.93338 1.16032 0.94997 0.83016 0.77838 0.85476 1.20398 0.93096 0.97279 0.99730 1.20986 1.00458 0.90515 1.07660 0.87637 0.92083 0.91998 0.75565 0.87835 0.89863 0.84946 0.71281 0.72315 0.89784 0.87573 0.80796 0.86852 0.77407 1.17941 1.17659 0.84164 0.83342 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.31 -0.31 10.50 -19.63 -0.21 -0.51 16 3 C 0.15 0.18 6.70 -39.12 -0.26 -0.08 16 4 C 0.05 0.13 7.35 -38.24 -0.28 -0.16 16 5 O -0.17 -0.47 10.28 2.67 0.03 -0.45 16 6 C -0.03 -0.07 7.07 -36.91 -0.26 -0.33 16 7 C 0.61 1.32 7.80 -12.72 -0.10 1.22 16 8 O -0.50 -2.52 16.42 5.23 0.09 -2.44 16 9 N -0.70 0.67 5.26 -54.22 -0.29 0.38 16 10 C 0.12 -0.30 4.32 -67.12 -0.29 -0.59 16 11 H 0.12 -0.16 7.46 -51.93 -0.39 -0.55 16 12 C -0.14 0.39 7.45 -25.82 -0.19 0.20 16 13 C -0.12 0.48 3.28 -89.71 -0.29 0.19 16 14 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 15 C 0.10 -0.40 3.39 -68.21 -0.23 -0.63 16 16 N -0.72 2.41 6.15 -59.19 -0.36 2.04 16 17 C 0.70 0.12 8.99 -88.02 -0.79 -0.67 16 18 O -0.54 -2.43 18.04 5.33 0.10 -2.33 16 19 N -0.68 0.79 5.70 -15.79 -0.09 0.70 16 20 C 0.53 -0.48 8.14 -10.55 -0.09 -0.57 16 21 O -0.46 -1.05 18.02 5.60 0.10 -0.95 16 22 C -0.14 0.69 7.29 -25.92 -0.19 0.50 16 23 C -0.10 -0.26 10.68 -37.23 -0.40 -0.66 16 24 C -0.08 -0.18 6.16 -105.21 -0.65 -0.83 16 25 C -0.10 -0.03 5.26 -104.63 -0.55 -0.58 16 26 C -0.07 0.02 2.71 36.00 0.10 0.12 16 27 O -0.54 -0.08 12.88 -35.23 -0.45 -0.53 16 28 Si 0.69 -1.13 29.93 -169.99 -5.09 -6.22 16 29 C -0.09 0.14 8.62 -39.97 -0.34 -0.21 16 30 C -0.18 0.23 9.03 -39.38 -0.36 -0.13 16 31 H 0.11 -0.45 8.14 -51.93 -0.42 -0.88 16 32 H 0.06 -0.26 7.66 -51.93 -0.40 -0.65 16 33 H 0.06 -0.27 7.66 -51.93 -0.40 -0.67 16 34 H 0.41 -0.92 8.42 -40.82 -0.34 -1.27 16 35 H 0.10 -0.40 8.03 -51.93 -0.42 -0.82 16 36 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.13 -0.76 8.05 -51.92 -0.42 -1.18 16 38 H 0.44 -2.26 8.96 -40.82 -0.37 -2.63 16 39 H 0.43 -0.99 8.96 -40.82 -0.37 -1.35 16 40 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 41 H 0.11 -0.70 8.10 -51.93 -0.42 -1.12 16 42 H 0.17 0.36 8.06 -52.48 -0.42 -0.07 16 43 H 0.11 0.05 7.96 -51.93 -0.41 -0.36 16 44 H 0.38 -1.48 8.70 45.56 0.40 -1.08 16 45 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 46 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 47 H 0.14 -0.63 5.07 -52.48 -0.27 -0.90 16 48 H 0.15 -0.61 6.26 -52.48 -0.33 -0.94 16 LS Contribution 413.39 15.07 6.23 6.23 Total: 0.00 -13.23 413.39 -9.57 -22.79 By element: Atomic # 1 Polarization: -11.00 SS G_CDS: -5.44 Total: -16.44 kcal Atomic # 6 Polarization: 1.91 SS G_CDS: -4.18 Total: -2.28 kcal Atomic # 7 Polarization: 3.86 SS G_CDS: -0.74 Total: 3.12 kcal Atomic # 8 Polarization: -6.86 SS G_CDS: -0.35 Total: -7.21 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.09 Total: -6.22 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -13.23 -9.57 -22.79 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_6672420.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.074 kcal (2) G-P(sol) polarization free energy of solvation -13.225 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.300 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.569 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.794 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.868 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds