Wall clock time and date at job start Sun Mar 7 2021 08:21:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33811 * 122.45501 * 2 1 4 4 C 1.50697 * 124.52252 * 0.02562 * 3 2 1 5 5 O 1.42902 * 109.47303 * 246.67336 * 4 3 2 6 6 Si 1.86296 * 109.47322 * 126.67086 * 4 3 2 7 7 S 1.70616 * 110.95605 * 179.78778 * 3 2 1 8 8 C 1.75831 * 91.56285 * 0.30510 * 7 3 2 9 9 C 1.46585 * 125.45792 * 179.97438 * 8 7 3 10 10 O 1.21701 * 119.99881 * 179.69523 * 9 8 7 11 11 N 1.34782 * 119.99573 * 359.69026 * 9 8 7 12 12 C 1.46504 * 119.99373 * 179.97438 * 11 9 8 13 13 H 1.09006 * 112.85066 * 23.81185 * 12 11 9 14 14 C 1.53780 * 113.61198 * 154.99993 * 12 11 9 15 15 C 1.53784 * 87.07800 * 89.20162 * 14 12 11 16 16 H 1.09003 * 113.61141 * 270.88020 * 15 14 12 17 17 C 1.52996 * 113.61146 * 139.98247 * 15 14 12 18 18 N 1.47312 * 110.60265 * 294.17175 * 17 15 14 19 19 C 1.34530 * 106.62165 * 241.47931 * 18 17 15 20 20 O 1.21537 * 123.76976 * 180.02562 * 19 18 17 21 21 N 1.33789 * 112.45573 * 359.97438 * 19 18 17 22 22 C 1.34774 * 111.64829 * 0.02562 * 21 19 18 23 23 O 1.21226 * 127.15974 * 179.97438 * 22 21 19 24 24 C 1.53769 * 113.69244 * 252.53467 * 12 11 9 25 25 C 1.36645 * 109.08202 * 359.69751 * 8 7 3 26 26 H 1.09002 * 109.47150 * 275.07976 * 1 2 3 27 27 H 1.08999 * 109.46699 * 35.07271 * 1 2 3 28 28 H 1.08993 * 109.47543 * 155.07105 * 1 2 3 29 29 H 1.09003 * 109.47016 * 6.67201 * 4 3 2 30 30 H 0.96694 * 113.99707 * 299.99458 * 5 4 3 31 31 H 1.48497 * 110.00102 * 58.68167 * 6 4 3 32 32 H 1.48502 * 110.00473 * 180.02562 * 6 4 3 33 33 H 0.96996 * 120.00304 * 0.02562 * 11 9 8 34 34 H 1.09000 * 113.61538 * 203.75149 * 14 12 11 35 35 H 1.09004 * 113.61646 * 334.65763 * 14 12 11 36 36 H 1.09002 * 110.53850 * 57.17229 * 17 15 14 37 37 H 0.96999 * 126.68676 * 61.44776 * 18 17 15 38 38 H 0.97002 * 124.17867 * 180.02562 * 21 19 18 39 39 H 1.09003 * 113.61980 * 25.42687 * 24 12 11 40 40 H 1.09004 * 113.61542 * 156.32686 * 24 12 11 41 41 H 1.08001 * 123.35258 * 180.20466 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1291 0.0000 4 6 1.6357 2.5161 0.0006 5 8 1.9399 3.1634 -1.2366 6 14 2.3588 3.4975 1.4093 7 16 3.8970 0.7890 0.0059 8 6 3.5936 -0.9429 -0.0010 9 6 4.6230 -1.9865 -0.0006 10 8 4.2999 -3.1599 0.0000 11 7 5.9272 -1.6465 -0.0009 12 6 6.9560 -2.6896 0.0001 13 1 6.5989 -3.6367 -0.4046 14 6 8.2977 -2.2320 -0.5958 15 6 8.6832 -1.7788 0.8223 16 1 8.3904 -0.7533 1.0477 17 6 10.1392 -2.0761 1.1861 18 7 10.3708 -3.5294 1.2516 19 6 10.7474 -3.8026 2.5139 20 8 11.0182 -4.9186 2.9116 21 7 10.7914 -2.7082 3.2823 22 6 10.4448 -1.6028 2.5934 23 8 10.3889 -0.4666 3.0122 24 6 7.6907 -2.8315 1.3434 25 6 2.2445 -1.1602 -0.0005 26 1 -0.3633 0.0910 1.0236 27 1 -0.3633 0.8411 -0.5905 28 1 -0.3634 -0.9318 -0.4331 29 1 0.5542 2.4512 0.1204 30 1 2.8868 3.2559 -1.4096 31 1 3.8360 3.5663 1.2748 32 1 1.7851 4.8672 1.4213 33 1 6.1847 -0.7114 -0.0010 34 1 8.9096 -3.0509 -0.9739 35 1 8.2026 -1.4104 -1.3059 36 1 10.8153 -1.6096 0.4696 37 1 10.2708 -4.1655 0.5262 38 1 11.0417 -2.7100 4.2194 39 1 7.1057 -2.4942 2.1990 40 1 8.1367 -3.8145 1.4955 41 1 1.8017 -2.1452 -0.0009 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17522896_6739946.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:21:58 Heat of formation + Delta-G solvation = -46.020040 kcal Electronic energy + Delta-G solvation = -28292.472071 eV Core-core repulsion = 24074.541681 eV Total energy + Delta-G solvation = -4217.930390 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.097 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -43.66991 -41.38386 -40.16241 -39.72831 -39.28826 -37.74385 -37.14570 -35.20948 -34.05172 -32.45818 -29.96471 -29.89817 -27.11750 -27.07820 -25.27427 -24.35758 -23.81733 -22.70333 -22.07776 -20.71202 -20.21026 -19.60991 -19.35835 -18.24065 -17.94833 -17.78269 -17.59180 -17.26118 -16.96311 -16.77394 -16.25867 -16.19220 -15.91646 -15.72165 -15.50451 -15.43765 -15.20960 -14.92312 -14.78017 -14.43585 -14.09254 -13.84975 -13.55879 -13.49831 -13.24921 -13.10395 -12.78516 -12.51721 -12.37996 -12.36552 -11.94520 -11.85553 -11.74893 -11.49819 -11.30808 -11.21344 -11.01867 -10.66886 -10.33871 -9.78095 -9.54770 -5.14328 -0.72208 0.20984 0.43316 0.61914 0.99734 1.20324 1.27201 1.40393 1.78982 1.82145 1.88130 1.93332 2.06291 2.70138 3.06791 3.11201 3.14342 3.31409 3.41639 3.46790 3.60831 3.83384 3.90348 4.01289 4.11713 4.14764 4.35700 4.35953 4.36750 4.38839 4.53276 4.61503 4.62967 4.71453 4.74006 4.82214 4.89865 4.90718 5.19413 5.29835 5.30216 5.55960 5.75574 6.12406 6.20523 6.21812 6.97579 6.99586 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C -0.093 4.093 3 C -0.225 4.225 4 C -0.042 4.042 5 O -0.522 6.522 6 Si 0.672 3.328 7 S 0.185 5.815 8 C -0.260 4.260 9 C 0.597 3.403 10 O -0.520 6.520 11 N -0.712 5.712 12 C 0.125 3.875 13 H 0.112 0.888 14 C -0.135 4.135 15 C -0.118 4.118 16 H 0.116 0.884 17 C 0.102 3.898 18 N -0.720 5.720 19 C 0.705 3.295 20 O -0.538 6.538 21 N -0.680 5.680 22 C 0.530 3.470 23 O -0.463 6.463 24 C -0.151 4.151 25 C -0.041 4.041 26 H 0.078 0.922 27 H 0.072 0.928 28 H 0.072 0.928 29 H 0.131 0.869 30 H 0.374 0.626 31 H -0.243 1.243 32 H -0.240 1.240 33 H 0.399 0.601 34 H 0.101 0.899 35 H 0.085 0.915 36 H 0.135 0.865 37 H 0.442 0.558 38 H 0.435 0.565 39 H 0.077 0.923 40 H 0.101 0.899 41 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.124 3.161 -1.401 3.460 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C -0.106 4.106 3 C -0.345 4.345 4 C -0.154 4.154 5 O -0.328 6.328 6 Si 0.570 3.430 7 S 0.454 5.546 8 C -0.380 4.380 9 C 0.384 3.616 10 O -0.397 6.397 11 N -0.363 5.363 12 C 0.020 3.980 13 H 0.130 0.870 14 C -0.173 4.173 15 C -0.137 4.137 16 H 0.134 0.866 17 C -0.007 4.007 18 N -0.386 5.386 19 C 0.404 3.596 20 O -0.411 6.411 21 N -0.351 5.351 22 C 0.315 3.685 23 O -0.331 6.331 24 C -0.189 4.189 25 C -0.075 4.075 26 H 0.097 0.903 27 H 0.091 0.909 28 H 0.091 0.909 29 H 0.149 0.851 30 H 0.222 0.778 31 H -0.167 1.167 32 H -0.163 1.163 33 H 0.234 0.766 34 H 0.120 0.880 35 H 0.104 0.896 36 H 0.152 0.848 37 H 0.287 0.713 38 H 0.277 0.723 39 H 0.096 0.904 40 H 0.119 0.881 41 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 0.908 3.995 -0.840 4.182 hybrid contribution -0.441 -0.582 -0.886 1.148 sum 0.467 3.413 -1.726 3.853 Atomic orbital electron populations 1.20633 0.88834 1.03571 1.03014 1.18688 0.98253 0.90656 1.02981 1.24381 0.98323 1.00851 1.10914 1.24591 1.05731 0.89833 0.95254 1.86681 1.29396 1.79632 1.37065 0.94688 0.81045 0.81877 0.85388 1.82890 1.03664 0.98813 1.69255 1.24419 0.97970 0.96493 1.19150 1.16908 0.81448 0.87444 0.75838 1.90873 1.81466 1.18108 1.49216 1.45509 1.05073 1.09679 1.76043 1.21759 0.86910 0.92604 0.96776 0.86959 1.23380 0.95888 1.02504 0.95569 1.22987 0.91007 1.01564 0.98163 0.86635 1.21977 0.99925 0.82282 0.96526 1.45548 1.72490 1.08900 1.11663 1.15837 0.77996 0.83974 0.81814 1.91109 1.53485 1.20907 1.75583 1.44350 1.65312 1.09226 1.16207 1.20762 0.74946 0.84552 0.88247 1.90880 1.48521 1.18529 1.75202 1.23586 0.96986 0.99938 0.98425 1.20734 0.90842 1.00168 0.95725 0.90340 0.90888 0.90866 0.85127 0.77819 1.16665 1.16336 0.76621 0.88037 0.89645 0.84757 0.71262 0.72282 0.90383 0.88096 0.82473 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.21 9.48 36.01 0.34 0.55 16 2 C -0.09 0.04 5.78 -106.45 -0.62 -0.58 16 3 C -0.23 0.19 4.83 -35.86 -0.17 0.01 16 4 C -0.04 0.06 2.77 36.00 0.10 0.16 16 5 O -0.52 -0.04 12.88 -35.23 -0.45 -0.49 16 6 Si 0.67 -1.31 32.12 -169.99 -5.46 -6.77 16 7 S 0.18 -0.28 20.82 -107.50 -2.24 -2.51 16 8 C -0.26 -0.15 6.45 -36.79 -0.24 -0.39 16 9 C 0.60 0.97 7.78 -12.89 -0.10 0.87 16 10 O -0.52 -2.72 16.44 5.19 0.09 -2.63 16 11 N -0.71 1.11 5.26 -54.35 -0.29 0.82 16 12 C 0.12 -0.31 4.32 -67.12 -0.29 -0.60 16 13 H 0.11 -0.10 7.46 -51.93 -0.39 -0.49 16 14 C -0.14 0.73 7.32 -25.92 -0.19 0.54 16 15 C -0.12 0.55 3.52 -89.81 -0.32 0.23 16 16 H 0.12 -0.53 8.14 -51.93 -0.42 -0.96 16 17 C 0.10 -0.45 3.70 -68.20 -0.25 -0.70 16 18 N -0.72 2.72 4.45 -59.19 -0.26 2.46 16 19 C 0.70 -0.17 8.92 -88.02 -0.78 -0.96 16 20 O -0.54 -2.24 18.04 5.33 0.10 -2.15 16 21 N -0.68 1.06 5.70 -15.79 -0.09 0.97 16 22 C 0.53 -0.76 8.14 -10.55 -0.09 -0.85 16 23 O -0.46 -0.81 18.02 5.60 0.10 -0.71 16 24 C -0.15 0.42 7.27 -25.93 -0.19 0.24 16 25 C -0.04 -0.02 9.78 -40.44 -0.40 -0.42 16 26 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 27 H 0.07 -0.15 6.99 -51.93 -0.36 -0.52 16 28 H 0.07 -0.17 8.10 -51.93 -0.42 -0.59 16 29 H 0.13 -0.30 6.25 -51.93 -0.32 -0.62 16 30 H 0.37 -1.02 8.70 45.56 0.40 -0.62 16 31 H -0.24 0.15 7.11 56.52 0.40 0.56 16 32 H -0.24 -0.21 7.11 56.52 0.40 0.19 16 33 H 0.40 -1.40 7.82 -40.82 -0.32 -1.71 16 34 H 0.10 -0.68 7.69 -51.93 -0.40 -1.08 16 35 H 0.08 -0.49 8.14 -51.93 -0.42 -0.92 16 36 H 0.14 -0.85 8.14 -51.93 -0.42 -1.28 16 37 H 0.44 -2.43 8.65 -40.82 -0.35 -2.79 16 38 H 0.43 -1.14 8.96 -40.82 -0.37 -1.50 16 39 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 40 H 0.10 -0.26 6.71 -51.93 -0.35 -0.61 16 41 H 0.16 0.06 8.06 -52.49 -0.42 -0.36 16 LS Contribution 364.12 15.07 5.49 5.49 Total: 0.00 -11.09 364.12 -10.83 -21.92 By element: Atomic # 1 Polarization: -9.88 SS G_CDS: -4.62 Total: -14.50 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: -3.19 Total: -1.89 kcal Atomic # 7 Polarization: 4.89 SS G_CDS: -0.64 Total: 4.25 kcal Atomic # 8 Polarization: -5.81 SS G_CDS: -0.17 Total: -5.98 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.46 Total: -6.77 kcal Atomic # 16 Polarization: -0.28 SS G_CDS: -2.24 Total: -2.51 kcal Total LS contribution 5.49 Total: 5.49 kcal Total: -11.09 -10.83 -21.92 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_6739946.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.099 kcal (2) G-P(sol) polarization free energy of solvation -11.092 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.191 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.829 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.921 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.020 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds