Wall clock time and date at job start Sun Mar 7 2021 08:25:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34235 * 116.99811 * 2 1 4 4 O 1.20828 * 119.99855 * 359.97438 * 3 2 1 5 5 C 1.50699 * 119.99822 * 179.97438 * 3 2 1 6 6 C 1.52999 * 109.46876 * 179.97438 * 5 3 2 7 7 C 1.53003 * 109.47006 * 180.02562 * 6 5 3 8 8 H 1.08997 * 112.91098 * 43.75002 * 7 6 5 9 9 C 1.53781 * 113.61480 * 175.00187 * 7 6 5 10 10 C 1.53786 * 87.17350 * 139.93948 * 9 7 6 11 11 H 1.09000 * 113.61138 * 220.06261 * 10 9 7 12 12 N 1.46496 * 113.61518 * 89.15486 * 10 9 7 13 13 C 1.34779 * 119.99390 * 154.99856 * 12 10 9 14 14 O 1.21277 * 120.00682 * 0.02562 * 13 12 10 15 15 C 1.50703 * 119.99369 * 180.02562 * 13 12 10 16 16 O 1.42900 * 109.46859 * 180.02562 * 15 13 12 17 17 C 1.35903 * 117.00134 * 180.02562 * 16 15 13 18 18 C 1.38707 * 120.05756 * 180.02562 * 17 16 15 19 19 N 1.48001 * 120.02788 * 359.94974 * 18 17 16 20 20 O 1.21803 * 120.00242 * 180.02562 * 19 18 17 21 21 O 1.21798 * 119.99835 * 0.02562 * 19 18 17 22 22 C 1.38174 * 119.94302 * 179.97438 * 18 17 16 23 23 C 1.38236 * 120.05276 * 0.02562 * 22 18 17 24 24 C 1.50709 * 119.93936 * 179.97438 * 23 22 18 25 25 O 1.42902 * 109.47087 * 300.00315 * 24 23 22 26 26 Si 1.86297 * 109.46974 * 180.02562 * 24 23 22 27 27 C 1.38288 * 120.11883 * 359.97438 * 23 22 18 28 28 C 1.38123 * 120.05186 * 359.74645 * 27 23 22 29 29 C 1.53782 * 113.61259 * 272.50022 * 7 6 5 30 30 H 1.09003 * 109.47451 * 300.00386 * 1 2 3 31 31 H 1.09008 * 109.47102 * 60.00075 * 1 2 3 32 32 H 1.08999 * 109.47365 * 179.97438 * 1 2 3 33 33 H 1.09002 * 109.46877 * 60.00572 * 5 3 2 34 34 H 1.09000 * 109.47660 * 300.00052 * 5 3 2 35 35 H 1.08994 * 109.47087 * 60.00564 * 6 5 3 36 36 H 1.09002 * 109.47640 * 299.99955 * 6 5 3 37 37 H 1.09002 * 113.61445 * 254.52948 * 9 7 6 38 38 H 1.09002 * 113.61408 * 25.34678 * 9 7 6 39 39 H 0.97001 * 120.00117 * 335.00621 * 12 10 9 40 40 H 1.09002 * 109.47174 * 300.00130 * 15 13 12 41 41 H 1.09002 * 109.47481 * 60.00351 * 15 13 12 42 42 H 1.07999 * 119.96692 * 179.97438 * 22 18 17 43 43 H 1.08999 * 109.47181 * 60.00100 * 24 23 22 44 44 H 0.96706 * 113.99758 * 180.02562 * 25 24 23 45 45 H 1.48505 * 110.00116 * 60.00284 * 26 24 23 46 46 H 1.48503 * 110.00174 * 181.32099 * 26 24 23 47 47 H 1.07997 * 119.97281 * 179.97438 * 27 23 22 48 48 H 1.08003 * 120.03214 * 180.27804 * 28 27 23 49 49 H 1.08997 * 113.61668 * 334.56352 * 29 7 6 50 50 H 1.08998 * 113.61674 * 105.38861 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0000 2.7422 -0.0002 7 6 5.5279 2.8223 -0.0002 8 1 5.9897 2.1199 -0.6941 9 6 6.0696 4.2562 -0.1238 10 6 7.1386 3.8600 0.9083 11 1 7.3485 4.6394 1.6408 12 7 8.3520 3.2978 0.3101 13 6 9.5249 3.3714 0.9700 14 8 9.5758 3.9025 2.0592 15 6 10.7732 2.7936 0.3544 16 8 11.8772 2.9935 1.2395 17 6 13.0871 2.5281 0.8316 18 6 14.2019 2.6877 1.6415 19 7 14.0752 3.3663 2.9506 20 8 15.0545 3.5066 3.6612 21 8 12.9917 3.7844 3.3174 22 6 15.4308 2.2131 1.2247 23 6 15.5499 1.5801 0.0015 24 6 16.8916 1.0639 -0.4508 25 8 17.8172 2.1497 -0.5314 26 14 16.7186 0.2703 -2.1273 27 6 14.4401 1.4197 -0.8078 28 6 13.2083 1.8872 -0.3932 29 6 6.1463 2.7939 1.4075 30 1 -0.3634 0.5139 0.8900 31 1 -0.3634 0.5139 -0.8901 32 1 -0.3634 -1.0276 -0.0005 33 1 3.9563 0.7807 -0.8892 34 1 3.9557 0.7810 0.8908 35 1 3.6100 3.2368 0.8893 36 1 3.6107 3.2358 -0.8906 37 1 6.4771 4.4857 -1.1083 38 1 5.3767 5.0172 0.2354 39 1 8.3113 2.8728 -0.5609 40 1 10.6336 1.7262 0.1836 41 1 10.9737 3.2903 -0.5949 42 1 16.2991 2.3375 1.8547 43 1 17.2574 0.3271 0.2644 44 1 18.7038 1.8903 -0.8176 45 1 16.2209 1.2651 -3.1113 46 1 18.0284 -0.2711 -2.5707 47 1 14.5359 0.9252 -1.7631 48 1 12.3409 1.7578 -1.0235 49 1 5.4750 3.1550 2.1866 50 1 6.6145 1.8424 1.6597 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17523010_4549638.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:25:54 Heat of formation + Delta-G solvation = -128.393764 kcal Electronic energy + Delta-G solvation = -35821.345678 eV Core-core repulsion = 30592.758905 eV Total energy + Delta-G solvation = -5228.586773 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.160 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -42.98841 -41.82544 -41.51837 -41.13468 -39.96295 -39.06944 -37.68675 -37.55464 -37.09627 -35.20975 -33.61708 -33.33749 -32.45325 -30.16345 -29.05744 -27.56792 -27.06059 -26.80996 -26.54546 -24.25936 -23.39023 -22.70091 -22.05744 -21.59727 -20.52509 -20.29953 -19.44401 -19.06612 -18.81238 -18.62179 -18.41149 -18.28746 -17.68908 -17.64781 -17.53914 -17.46672 -16.99988 -16.63703 -16.18756 -16.03907 -15.85653 -15.66144 -15.37157 -15.25661 -14.86878 -14.50577 -14.42234 -14.33039 -14.16834 -13.96077 -13.84981 -13.59803 -13.48518 -13.21132 -13.12231 -12.88306 -12.77888 -12.49273 -12.30377 -12.17143 -12.08411 -12.06097 -11.79682 -11.78463 -11.70698 -11.66012 -11.39594 -11.23685 -10.98406 -10.89752 -10.81074 -10.21200 -9.86102 -5.24741 -1.09214 -0.34048 0.41513 0.56366 0.98418 1.08038 1.20117 1.33965 1.39302 1.70338 1.71087 1.94908 2.18257 2.87907 3.05894 3.10521 3.31141 3.33626 3.40490 3.42820 3.55370 3.56972 3.59714 3.60523 3.70453 3.73804 3.75287 4.00285 4.05787 4.10241 4.14434 4.18099 4.22675 4.30441 4.30799 4.39052 4.45907 4.57563 4.60239 4.63282 4.71032 4.73024 4.74050 4.85603 4.94931 4.95544 5.04449 5.14820 5.39058 5.42714 5.49777 5.73501 6.18429 6.24034 6.73260 6.97084 7.02465 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.362 6.362 3 C 0.457 3.543 4 O -0.507 6.507 5 C -0.113 4.113 6 C -0.100 4.100 7 C -0.112 4.112 8 H 0.093 0.907 9 C -0.139 4.139 10 C 0.120 3.880 11 H 0.107 0.893 12 N -0.710 5.710 13 C 0.516 3.484 14 O -0.493 6.493 15 C 0.031 3.969 16 O -0.253 6.253 17 C 0.200 3.800 18 C -0.075 4.075 19 N 0.029 4.971 20 O -0.178 6.178 21 O -0.118 6.118 22 C 0.010 3.990 23 C -0.110 4.110 24 C -0.074 4.074 25 O -0.535 6.535 26 Si 0.684 3.316 27 C -0.022 4.022 28 C -0.209 4.209 29 C -0.148 4.148 30 H 0.064 0.936 31 H 0.063 0.937 32 H 0.103 0.897 33 H 0.105 0.895 34 H 0.107 0.893 35 H 0.076 0.924 36 H 0.075 0.925 37 H 0.075 0.925 38 H 0.100 0.900 39 H 0.402 0.598 40 H 0.103 0.897 41 H 0.102 0.898 42 H 0.163 0.837 43 H 0.085 0.915 44 H 0.386 0.614 45 H -0.251 1.251 46 H -0.255 1.255 47 H 0.150 0.850 48 H 0.158 0.842 49 H 0.095 0.905 50 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.234 -8.589 -9.242 12.677 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.300 3.700 4 O -0.394 6.394 5 C -0.150 4.150 6 C -0.137 4.137 7 C -0.130 4.130 8 H 0.111 0.889 9 C -0.177 4.177 10 C 0.015 3.985 11 H 0.125 0.875 12 N -0.364 5.364 13 C 0.299 3.701 14 O -0.365 6.365 15 C -0.048 4.048 16 O -0.163 6.163 17 C 0.150 3.850 18 C -0.160 4.160 19 N 0.549 4.451 20 O -0.387 6.387 21 O -0.342 6.342 22 C -0.009 4.009 23 C -0.111 4.111 24 C -0.183 4.183 25 O -0.343 6.343 26 Si 0.584 3.416 27 C -0.040 4.040 28 C -0.228 4.228 29 C -0.187 4.187 30 H 0.083 0.917 31 H 0.082 0.918 32 H 0.121 0.879 33 H 0.124 0.876 34 H 0.125 0.875 35 H 0.095 0.905 36 H 0.094 0.906 37 H 0.094 0.906 38 H 0.118 0.882 39 H 0.236 0.764 40 H 0.121 0.879 41 H 0.120 0.880 42 H 0.181 0.819 43 H 0.103 0.897 44 H 0.234 0.766 45 H -0.176 1.176 46 H -0.179 1.179 47 H 0.167 0.833 48 H 0.175 0.825 49 H 0.113 0.887 50 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -1.621 -7.772 -9.482 12.367 hybrid contribution 0.776 0.361 -0.180 0.875 sum -0.845 -7.412 -9.663 12.207 Atomic orbital electron populations 1.23305 0.75946 1.03955 1.02709 1.86509 1.23797 1.33560 1.84026 1.23919 0.92427 0.81357 0.72270 1.90698 1.67355 1.36359 1.45022 1.21435 0.87240 1.00366 1.05979 1.21435 0.94408 0.93710 1.04193 1.22644 0.94826 0.97567 0.97965 0.88908 1.23373 0.97438 0.97279 0.99655 1.21900 0.82957 0.96914 0.96723 0.87464 1.45438 1.07161 1.61206 1.22629 1.19820 0.83850 0.80372 0.86029 1.90871 1.85097 1.41085 1.19426 1.22725 0.85293 1.02930 0.93821 1.86502 1.13232 1.73291 1.43243 1.18675 0.84563 0.90256 0.91526 1.20551 0.95002 1.12246 0.88193 1.43323 1.00823 0.99245 1.01683 1.94552 1.29676 1.62348 1.52090 1.94695 1.14022 1.49054 1.76403 1.20798 0.95015 0.89662 0.95380 1.19143 0.94693 1.03074 0.94201 1.24774 0.88531 0.93201 1.11823 1.86588 1.24142 1.33487 1.90088 0.95267 0.86571 0.84808 0.74971 1.21191 0.91261 0.93240 0.98292 1.21236 1.00254 1.05279 0.95992 1.23583 0.98214 1.00023 0.96879 0.91749 0.91783 0.87898 0.87631 0.87510 0.90490 0.90608 0.90601 0.88193 0.76381 0.87922 0.88029 0.81948 0.89714 0.76561 1.17570 1.17920 0.83329 0.82493 0.88670 0.90799 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.29 10.57 -39.27 -0.41 -0.71 16 3 C 0.46 0.41 7.96 36.01 0.29 0.70 16 4 O -0.51 -2.06 15.73 -18.75 -0.29 -2.35 16 5 C -0.11 0.32 5.80 -27.88 -0.16 0.15 16 6 C -0.10 0.26 4.34 -26.73 -0.12 0.15 16 7 C -0.11 0.47 3.53 -89.80 -0.32 0.15 16 8 H 0.09 -0.52 8.13 -51.93 -0.42 -0.94 16 9 C -0.14 0.50 7.38 -25.92 -0.19 0.31 16 10 C 0.12 -0.24 4.33 -67.02 -0.29 -0.53 16 11 H 0.11 0.05 7.47 -51.93 -0.39 -0.34 16 12 N -0.71 2.20 5.27 -52.92 -0.28 1.92 16 13 C 0.52 0.11 7.91 -10.98 -0.09 0.02 16 14 O -0.49 -2.96 16.10 -14.35 -0.23 -3.19 16 15 C 0.03 -0.09 5.22 36.01 0.19 0.10 16 16 O -0.25 -0.55 7.68 -49.79 -0.38 -0.93 16 17 C 0.20 0.19 6.67 -39.22 -0.26 -0.08 16 18 C -0.08 -0.24 6.87 -79.81 -0.55 -0.79 16 19 N 0.03 0.20 4.45 34.03 0.15 0.35 16 20 O -0.18 -1.34 18.45 -29.46 -0.54 -1.88 16 21 O -0.12 -1.03 17.24 -36.49 -0.63 -1.66 16 22 C 0.01 0.01 9.11 -39.61 -0.36 -0.35 16 23 C -0.11 0.13 5.42 -104.60 -0.57 -0.44 16 24 C -0.07 0.19 2.81 36.01 0.10 0.29 16 25 O -0.53 0.42 12.74 -35.23 -0.45 -0.03 16 26 Si 0.68 -2.59 29.78 -169.99 -5.06 -7.65 16 27 C -0.02 0.07 8.66 -39.61 -0.34 -0.27 16 28 C -0.21 0.64 9.04 -39.43 -0.36 0.28 16 29 C -0.15 0.41 7.44 -25.82 -0.19 0.22 16 30 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 31 H 0.06 -0.05 8.13 -51.92 -0.42 -0.48 16 32 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 33 H 0.11 -0.48 8.14 -51.93 -0.42 -0.90 16 34 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 35 H 0.08 -0.10 7.80 -51.93 -0.41 -0.51 16 36 H 0.08 -0.13 8.10 -51.93 -0.42 -0.55 16 37 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 38 H 0.10 -0.32 8.10 -51.93 -0.42 -0.74 16 39 H 0.40 -2.64 8.70 -40.82 -0.36 -3.00 16 40 H 0.10 -0.65 7.65 -51.93 -0.40 -1.05 16 41 H 0.10 -0.60 7.67 -51.93 -0.40 -1.00 16 42 H 0.16 0.16 7.61 -52.49 -0.40 -0.24 16 43 H 0.08 -0.35 7.96 -51.93 -0.41 -0.77 16 44 H 0.39 -1.80 8.74 45.56 0.40 -1.40 16 45 H -0.25 0.25 7.11 56.52 0.40 0.65 16 46 H -0.25 0.33 7.11 56.52 0.40 0.73 16 47 H 0.15 -0.89 4.87 -52.49 -0.26 -1.15 16 48 H 0.16 -1.09 6.30 -52.48 -0.33 -1.42 16 49 H 0.09 -0.23 7.90 -51.93 -0.41 -0.64 16 50 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 LS Contribution 429.26 15.07 6.47 6.47 Total: 0.00 -15.25 429.26 -10.59 -25.84 By element: Atomic # 1 Polarization: -10.35 SS G_CDS: -6.77 Total: -17.13 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: -2.15 Total: 0.95 kcal Atomic # 7 Polarization: 2.40 SS G_CDS: -0.13 Total: 2.27 kcal Atomic # 8 Polarization: -7.81 SS G_CDS: -2.95 Total: -10.76 kcal Atomic # 14 Polarization: -2.59 SS G_CDS: -5.06 Total: -7.65 kcal Total LS contribution 6.47 Total: 6.47 kcal Total: -15.25 -10.59 -25.84 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17523010_4549638.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.553 kcal (2) G-P(sol) polarization free energy of solvation -15.250 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.803 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.591 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.841 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.394 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds