Wall clock time and date at job start Sun Mar 7 2021 08:26:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34233 * 117.00271 * 2 1 4 4 O 1.20829 * 119.99612 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00190 * 180.02562 * 3 2 1 6 6 C 1.53004 * 109.47197 * 179.97438 * 5 3 2 7 7 C 1.52996 * 109.46847 * 179.97438 * 6 5 3 8 8 H 1.08997 * 112.85435 * 43.80513 * 7 6 5 9 9 C 1.53786 * 113.61039 * 174.99736 * 7 6 5 10 10 C 1.53781 * 87.07827 * 139.98196 * 9 7 6 11 11 H 1.09001 * 113.61418 * 219.93731 * 10 9 7 12 12 N 1.46499 * 113.61562 * 89.11795 * 10 9 7 13 13 C 1.34784 * 119.99971 * 156.52736 * 12 10 9 14 14 O 1.21274 * 119.99897 * 359.72827 * 13 12 10 15 15 C 1.50695 * 119.99635 * 179.97438 * 13 12 10 16 16 O 1.42906 * 109.47045 * 180.02562 * 15 13 12 17 17 C 1.35892 * 117.00297 * 179.97438 * 16 15 13 18 18 C 1.38749 * 120.02707 * 179.97438 * 17 16 15 19 19 C 1.50700 * 119.97432 * 359.96450 * 18 17 16 20 20 O 1.42897 * 109.46608 * 284.99279 * 19 18 17 21 21 Si 1.86302 * 109.47008 * 164.99730 * 19 18 17 22 22 C 1.38198 * 120.05384 * 179.97438 * 18 17 16 23 23 C 1.38160 * 120.10801 * 359.97438 * 22 18 17 24 24 C 1.38787 * 120.05708 * 0.02562 * 23 22 18 25 25 O 1.35898 * 120.03026 * 180.02562 * 24 23 22 26 26 C 1.42895 * 116.99969 * 0.02562 * 25 24 23 27 27 C 1.38618 * 119.94407 * 359.75044 * 24 23 22 28 28 C 1.53783 * 87.17424 * 334.52344 * 10 9 7 29 29 H 1.09005 * 109.47037 * 300.00663 * 1 2 3 30 30 H 1.09002 * 109.46471 * 60.00159 * 1 2 3 31 31 H 1.08993 * 109.47312 * 180.02562 * 1 2 3 32 32 H 1.08998 * 109.47275 * 59.99178 * 5 3 2 33 33 H 1.08999 * 109.47009 * 299.99638 * 5 3 2 34 34 H 1.08998 * 109.46889 * 59.99742 * 6 5 3 35 35 H 1.08999 * 109.47128 * 299.99911 * 6 5 3 36 36 H 1.09000 * 113.61315 * 25.43505 * 9 7 6 37 37 H 1.08993 * 113.69020 * 254.53792 * 9 7 6 38 38 H 0.96999 * 119.99984 * 336.52584 * 12 10 9 39 39 H 1.09005 * 109.47403 * 300.00056 * 15 13 12 40 40 H 1.09002 * 109.47422 * 60.00295 * 15 13 12 41 41 H 1.08994 * 109.47279 * 44.99096 * 19 18 17 42 42 H 0.96698 * 114.00821 * 299.99902 * 20 19 18 43 43 H 1.48502 * 110.00330 * 58.67827 * 21 19 18 44 44 H 1.48501 * 109.99717 * 179.97438 * 21 19 18 45 45 H 1.07997 * 119.94748 * 180.02562 * 22 18 17 46 46 H 1.07997 * 119.97035 * 180.02562 * 23 22 18 47 47 H 1.09000 * 109.47671 * 179.97438 * 26 25 24 48 48 H 1.09004 * 109.47026 * 300.00019 * 26 25 24 49 49 H 1.09004 * 109.47023 * 59.99568 * 26 25 24 50 50 H 1.07997 * 120.05382 * 180.25202 * 27 24 23 51 51 H 1.09008 * 113.61277 * 140.02039 * 28 10 9 52 52 H 1.08992 * 113.61683 * 270.92887 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 6 4.0002 2.7421 -0.0011 7 6 5.5281 2.8220 -0.0011 8 1 5.9888 2.1200 -0.6960 9 6 6.0698 4.2560 -0.1244 10 6 7.1384 3.8570 0.9069 11 1 7.3510 4.6360 1.6391 12 7 8.3507 3.2933 0.3079 13 6 9.5178 3.3367 0.9807 14 8 9.5654 3.8468 2.0799 15 6 10.7646 2.7563 0.3646 16 8 11.8622 2.9219 1.2647 17 6 13.0697 2.4487 0.8589 18 6 14.1783 2.5768 1.6833 19 6 14.0431 3.2418 3.0289 20 8 13.9309 4.6554 2.8523 21 14 15.5458 2.8625 4.0628 22 6 15.4065 2.0953 1.2714 23 6 15.5335 1.4849 0.0385 24 6 14.4276 1.3543 -0.7898 25 8 14.5531 0.7533 -2.0022 26 6 15.8527 0.2788 -2.3596 27 6 13.1936 1.8323 -0.3770 28 6 6.1476 2.7936 1.4091 29 1 -0.3633 0.5140 0.8900 30 1 -0.3632 0.5138 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 3.9558 0.7808 -0.8907 33 1 3.9564 0.7806 0.8892 34 1 3.6108 3.2364 0.8889 35 1 3.6102 3.2360 -0.8911 36 1 5.3776 5.0168 0.2362 37 1 6.4776 4.4870 -1.1085 38 1 8.3134 2.8888 -0.5730 39 1 10.6129 1.6947 0.1687 40 1 10.9810 3.2712 -0.5714 41 1 13.1519 2.8666 3.5317 42 1 14.6906 5.0582 2.4101 43 1 16.7709 3.3409 3.3731 44 1 15.4250 3.5132 5.3921 45 1 16.2682 2.1956 1.9146 46 1 16.4942 1.1091 -0.2810 47 1 15.8134 -0.1784 -3.3483 48 1 16.5534 1.1137 -2.3726 49 1 16.1826 -0.4610 -1.6303 50 1 12.3311 1.7280 -1.0184 51 1 6.6179 1.8432 1.6618 52 1 5.4765 3.1553 2.1881 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17523010_4974312.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:26:13 Heat of formation + Delta-G solvation = -170.979157 kcal Electronic energy + Delta-G solvation = -34129.308123 eV Core-core repulsion = 29255.671333 eV Total energy + Delta-G solvation = -4873.636790 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -41.87650 -41.57527 -41.19835 -40.14459 -39.36803 -38.31504 -37.63664 -37.00195 -35.16733 -33.36529 -32.29523 -31.40072 -29.67310 -28.91364 -28.33914 -26.84183 -26.54529 -26.12801 -24.00317 -23.17293 -22.49602 -21.92826 -21.54949 -20.31756 -19.93102 -18.66028 -18.57954 -18.12423 -17.82352 -17.69153 -17.55006 -17.49893 -17.21484 -16.85714 -16.65508 -16.48530 -16.05296 -15.99551 -15.64030 -15.49886 -15.18150 -15.10686 -14.92700 -14.55802 -14.48049 -14.39622 -14.11546 -13.75441 -13.55713 -13.41006 -13.36613 -13.32791 -13.13105 -13.03162 -12.65852 -12.46598 -12.29952 -12.13712 -12.03252 -11.88048 -11.83403 -11.65596 -11.65215 -11.62425 -11.29620 -11.09368 -11.02466 -10.51236 -10.14654 -9.69494 -9.09976 -4.92868 0.20621 0.31294 1.15399 1.31998 1.40727 1.42975 1.55858 1.78339 1.96671 2.25557 2.56020 2.58570 3.48658 3.50075 3.52670 3.53745 3.72740 3.72791 3.80895 3.85027 3.87951 3.95384 4.05686 4.07306 4.17744 4.20793 4.24819 4.28104 4.31537 4.35380 4.41113 4.43567 4.47304 4.54824 4.60238 4.66616 4.69846 4.76293 4.80260 4.81905 4.87240 4.91442 5.02771 5.04661 5.12517 5.23427 5.24213 5.28437 5.31305 5.41344 5.47618 5.62618 6.13904 6.36523 6.45076 6.57545 6.69246 7.11863 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.368 6.368 3 C 0.454 3.546 4 O -0.546 6.546 5 C -0.108 4.108 6 C -0.096 4.096 7 C -0.093 4.093 8 H 0.118 0.882 9 C -0.132 4.132 10 C 0.110 3.890 11 H 0.073 0.927 12 N -0.690 5.690 13 C 0.515 3.485 14 O -0.570 6.570 15 C 0.035 3.965 16 O -0.304 6.304 17 C 0.177 3.823 18 C -0.196 4.196 19 C -0.078 4.078 20 O -0.550 6.550 21 Si 0.781 3.219 22 C -0.041 4.041 23 C -0.238 4.238 24 C 0.165 3.835 25 O -0.329 6.329 26 C 0.016 3.984 27 C -0.251 4.251 28 C -0.147 4.147 29 H 0.058 0.942 30 H 0.060 0.940 31 H 0.128 0.872 32 H 0.132 0.868 33 H 0.122 0.878 34 H 0.059 0.941 35 H 0.068 0.932 36 H 0.094 0.906 37 H 0.089 0.911 38 H 0.421 0.579 39 H 0.127 0.873 40 H 0.120 0.880 41 H 0.097 0.903 42 H 0.381 0.619 43 H -0.263 1.263 44 H -0.309 1.309 45 H 0.155 0.845 46 H 0.157 0.843 47 H 0.117 0.883 48 H 0.066 0.934 49 H 0.070 0.930 50 H 0.155 0.845 51 H 0.073 0.927 52 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.201 -8.150 -7.327 11.417 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.285 6.285 3 C 0.299 3.701 4 O -0.437 6.437 5 C -0.145 4.145 6 C -0.134 4.134 7 C -0.112 4.112 8 H 0.136 0.864 9 C -0.170 4.170 10 C 0.004 3.996 11 H 0.091 0.909 12 N -0.344 5.344 13 C 0.302 3.698 14 O -0.448 6.448 15 C -0.043 4.043 16 O -0.216 6.216 17 C 0.131 3.869 18 C -0.197 4.197 19 C -0.185 4.185 20 O -0.358 6.358 21 Si 0.685 3.315 22 C -0.059 4.059 23 C -0.257 4.257 24 C 0.119 3.881 25 O -0.243 6.243 26 C -0.078 4.078 27 C -0.270 4.270 28 C -0.186 4.186 29 H 0.077 0.923 30 H 0.079 0.921 31 H 0.146 0.854 32 H 0.150 0.850 33 H 0.140 0.860 34 H 0.078 0.922 35 H 0.087 0.913 36 H 0.113 0.887 37 H 0.108 0.892 38 H 0.260 0.740 39 H 0.145 0.855 40 H 0.138 0.862 41 H 0.115 0.885 42 H 0.230 0.770 43 H -0.188 1.188 44 H -0.237 1.237 45 H 0.172 0.828 46 H 0.174 0.826 47 H 0.135 0.865 48 H 0.085 0.915 49 H 0.089 0.911 50 H 0.172 0.828 51 H 0.092 0.908 52 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 2.906 -7.231 -5.820 9.727 hybrid contribution -0.519 1.178 -0.860 1.548 sum 2.387 -6.053 -6.680 9.326 Atomic orbital electron populations 1.23485 0.75303 1.05490 1.02280 1.86515 1.24637 1.33560 1.83751 1.24667 0.93727 0.80777 0.70905 1.90678 1.68449 1.37507 1.47037 1.21561 0.84656 1.00404 1.07865 1.21367 0.95132 0.93854 1.03029 1.22628 0.93780 0.97546 0.97201 0.86378 1.23325 0.96421 0.97699 0.99575 1.21866 0.83726 0.96798 0.97165 0.90851 1.45313 1.06575 1.60754 1.21776 1.20493 0.85247 0.78836 0.85263 1.90780 1.86154 1.45546 1.22293 1.22742 0.83648 1.04400 0.93461 1.86223 1.15315 1.76001 1.44050 1.18578 0.84699 0.91706 0.91933 1.19604 0.92479 1.09032 0.98619 1.25157 1.13285 0.81813 0.98270 1.86651 1.46962 1.20401 1.81746 0.94129 0.72910 0.90006 0.74468 1.20941 0.95742 0.93546 0.95650 1.21397 0.99498 1.08573 0.96189 1.18870 0.93600 0.90820 0.84855 1.86053 1.34963 1.71588 1.31652 1.23403 0.81634 0.99805 1.02973 1.20558 0.98662 1.09983 0.97800 1.23570 0.97825 0.99486 0.97714 0.92328 0.92122 0.85413 0.85042 0.85998 0.92203 0.91335 0.88736 0.89231 0.74025 0.85545 0.86234 0.88463 0.77026 1.18842 1.23728 0.82761 0.82552 0.86523 0.91524 0.91104 0.82759 0.90833 0.89407 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.37 -0.86 10.57 -51.44 -0.54 -1.41 16 3 C 0.45 1.33 7.96 71.23 0.57 1.90 16 4 O -0.55 -5.54 15.73 21.95 0.35 -5.19 16 5 C -0.11 0.59 5.80 29.85 0.17 0.76 16 6 C -0.10 0.41 4.34 30.59 0.13 0.54 16 7 C -0.09 0.72 3.54 -10.17 -0.04 0.68 16 8 H 0.12 -1.43 8.13 -2.39 -0.02 -1.45 16 9 C -0.13 0.76 7.38 31.12 0.23 0.99 16 10 C 0.11 -0.13 4.30 45.52 0.20 0.07 16 11 H 0.07 0.41 7.50 -2.39 -0.02 0.39 16 12 N -0.69 2.38 5.26 -440.04 -2.32 0.06 16 13 C 0.52 2.28 7.91 87.65 0.69 2.97 16 14 O -0.57 -9.58 16.12 16.02 0.26 -9.32 16 15 C 0.04 -0.03 5.22 71.23 0.37 0.34 16 16 O -0.30 -2.46 8.99 -73.30 -0.66 -3.12 16 17 C 0.18 0.92 6.66 22.49 0.15 1.07 16 18 C -0.20 -0.82 5.27 -19.75 -0.10 -0.93 16 19 C -0.08 -0.48 2.37 71.24 0.17 -0.31 16 20 O -0.55 -5.62 12.88 -148.98 -1.92 -7.54 16 21 Si 0.78 0.60 30.24 68.60 2.07 2.67 16 22 C -0.04 0.02 8.65 22.24 0.19 0.21 16 23 C -0.24 0.32 9.04 22.38 0.20 0.52 16 24 C 0.16 0.18 6.68 22.49 0.15 0.33 16 25 O -0.33 -0.02 10.49 -92.40 -0.97 -0.99 16 26 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 27 C -0.25 -0.37 8.97 22.46 0.20 -0.17 16 28 C -0.15 0.53 7.45 31.21 0.23 0.76 16 29 H 0.06 0.01 8.13 -2.38 -0.02 -0.01 16 30 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 31 H 0.13 -0.83 8.14 -2.39 -0.02 -0.85 16 32 H 0.13 -1.35 8.14 -2.39 -0.02 -1.37 16 33 H 0.12 -0.99 8.14 -2.39 -0.02 -1.01 16 34 H 0.06 -0.04 7.80 -2.39 -0.02 -0.06 16 35 H 0.07 -0.16 8.10 -2.39 -0.02 -0.17 16 36 H 0.09 -0.41 8.10 -2.39 -0.02 -0.43 16 37 H 0.09 -0.72 8.14 -2.39 -0.02 -0.73 16 38 H 0.42 -4.80 8.70 -92.71 -0.81 -5.61 16 39 H 0.13 -0.95 7.65 -2.38 -0.02 -0.97 16 40 H 0.12 -0.74 7.67 -2.39 -0.02 -0.76 16 41 H 0.10 0.90 7.82 -2.39 -0.02 0.88 16 42 H 0.38 1.02 8.70 -74.06 -0.64 0.37 16 43 H -0.26 -0.26 6.68 99.48 0.66 0.41 16 44 H -0.31 -2.87 7.11 99.48 0.71 -2.16 16 45 H 0.16 -0.69 4.85 -2.91 -0.01 -0.70 16 46 H 0.16 -1.01 6.29 -2.91 -0.02 -1.03 16 47 H 0.12 -1.16 8.14 -2.39 -0.02 -1.18 16 48 H 0.07 -0.56 7.66 -2.39 -0.02 -0.58 16 49 H 0.07 -0.64 7.66 -2.39 -0.02 -0.66 16 50 H 0.15 -0.50 6.30 -2.91 -0.02 -0.52 16 51 H 0.07 -0.23 8.14 -2.38 -0.02 -0.25 16 52 H 0.09 -0.19 7.90 -2.39 -0.02 -0.21 16 Total: 0.00 -33.22 431.95 1.61 -31.61 By element: Atomic # 1 Polarization: -18.20 SS G_CDS: -0.49 Total: -18.69 kcal Atomic # 6 Polarization: 6.08 SS G_CDS: 5.83 Total: 11.91 kcal Atomic # 7 Polarization: 2.38 SS G_CDS: -2.32 Total: 0.06 kcal Atomic # 8 Polarization: -24.07 SS G_CDS: -3.49 Total: -27.56 kcal Atomic # 14 Polarization: 0.60 SS G_CDS: 2.07 Total: 2.67 kcal Total: -33.22 1.61 -31.61 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17523010_4974312.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -139.372 kcal (2) G-P(sol) polarization free energy of solvation -33.217 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -172.589 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.610 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.607 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.979 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds