Wall clock time and date at job start Sun Mar 7 2021 08:26:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34236 * 116.99868 * 2 1 4 4 O 1.20832 * 119.99765 * 359.97438 * 3 2 1 5 5 C 1.50700 * 120.00062 * 179.97438 * 3 2 1 6 6 C 1.52993 * 109.46851 * 179.97438 * 5 3 2 7 7 C 1.53003 * 109.46877 * 179.97438 * 6 5 3 8 8 H 1.09001 * 112.85085 * 316.19792 * 7 6 5 9 9 C 1.53784 * 113.68850 * 87.46646 * 7 6 5 10 10 C 1.53786 * 87.08246 * 139.99332 * 9 7 6 11 11 H 1.08996 * 113.69249 * 220.01220 * 10 9 7 12 12 N 1.46500 * 113.61791 * 89.11242 * 10 9 7 13 13 C 1.34772 * 119.99984 * 107.50063 * 12 10 9 14 14 O 1.21288 * 119.99878 * 0.02562 * 13 12 10 15 15 C 1.50702 * 120.00028 * 180.02562 * 13 12 10 16 16 O 1.42900 * 109.47196 * 180.02562 * 15 13 12 17 17 C 1.35988 * 117.00304 * 179.97438 * 16 15 13 18 18 C 1.39155 * 120.07714 * 180.02562 * 17 16 15 19 19 O 1.35994 * 120.07069 * 0.25048 * 18 17 16 20 20 C 1.42902 * 116.99966 * 179.72412 * 19 18 17 21 21 C 1.38565 * 119.85574 * 179.97438 * 18 17 16 22 22 C 1.38238 * 119.99937 * 359.97438 * 21 18 17 23 23 C 1.50704 * 119.92536 * 180.02562 * 22 21 18 24 24 O 1.42898 * 109.47030 * 64.99830 * 23 22 21 25 25 Si 1.86302 * 109.46775 * 184.99821 * 23 22 21 26 26 C 1.38258 * 120.14613 * 0.02562 * 22 21 18 27 27 C 1.38237 * 120.14715 * 359.95354 * 26 22 21 28 28 C 1.53784 * 113.61515 * 185.00006 * 7 6 5 29 29 H 1.08998 * 109.47654 * 299.99936 * 1 2 3 30 30 H 1.09009 * 109.47274 * 60.00327 * 1 2 3 31 31 H 1.09003 * 109.47286 * 180.02562 * 1 2 3 32 32 H 1.09001 * 109.46562 * 59.99931 * 5 3 2 33 33 H 1.08995 * 109.47004 * 299.99838 * 5 3 2 34 34 H 1.09001 * 109.47490 * 60.00626 * 6 5 3 35 35 H 1.09002 * 109.47404 * 299.99412 * 6 5 3 36 36 H 1.09001 * 113.61788 * 25.44467 * 9 7 6 37 37 H 1.09003 * 113.61222 * 254.53892 * 9 7 6 38 38 H 0.97000 * 119.99725 * 287.50964 * 12 10 9 39 39 H 1.08995 * 109.47265 * 60.00372 * 15 13 12 40 40 H 1.08999 * 109.47043 * 300.00451 * 15 13 12 41 41 H 1.08998 * 109.47006 * 60.00304 * 20 19 18 42 42 H 1.09001 * 109.46956 * 180.02562 * 20 19 18 43 43 H 1.08998 * 109.46920 * 300.00344 * 20 19 18 44 44 H 1.08000 * 119.99484 * 179.97438 * 21 18 17 45 45 H 1.09000 * 109.47100 * 304.99225 * 23 22 21 46 46 H 0.96698 * 114.00153 * 60.00148 * 24 23 22 47 47 H 1.48498 * 110.00043 * 58.68027 * 25 23 22 48 48 H 1.48506 * 109.99687 * 179.97438 * 25 23 22 49 49 H 1.07997 * 119.91985 * 179.97438 * 26 22 21 50 50 H 1.07993 * 120.00036 * 179.97438 * 27 26 22 51 51 H 1.08998 * 113.61407 * 105.38503 * 28 7 6 52 52 H 1.08999 * 113.61324 * 334.48296 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 6 4.0000 2.7422 -0.0002 7 6 5.5279 2.8223 0.0011 8 1 5.9880 2.1211 0.6973 9 6 6.1493 2.7914 -1.4053 10 6 7.1404 3.8557 -0.9051 11 1 7.3547 4.6335 -1.6380 12 7 8.3513 3.2929 -0.3023 13 6 9.5260 3.3625 -0.9593 14 8 9.5807 3.8915 -2.0493 15 6 10.7714 2.7831 -0.3394 16 8 11.8784 2.9799 -1.2215 17 6 13.0870 2.5123 -0.8094 18 6 14.2084 2.6701 -1.6180 19 8 14.0991 3.2969 -2.8199 20 6 15.2931 3.4283 -3.5940 21 6 15.4378 2.1924 -1.1933 22 6 15.5484 1.5611 0.0315 23 6 16.8864 1.0426 0.4921 24 8 17.7806 2.1399 0.6881 25 14 16.6757 0.1189 2.0962 26 6 14.4342 1.4043 0.8350 27 6 13.2049 1.8789 0.4174 28 6 6.0695 4.2564 0.1232 29 1 -0.3634 0.5138 0.8899 30 1 -0.3634 0.5138 -0.8901 31 1 -0.3634 -1.0277 0.0005 32 1 3.9563 0.7807 -0.8892 33 1 3.9556 0.7811 0.8908 34 1 3.6099 3.2369 0.8894 35 1 3.6107 3.2357 -0.8907 36 1 5.4798 3.1512 -2.1866 37 1 6.6193 1.8399 -1.6542 38 1 8.3074 2.8701 0.5696 39 1 10.6290 1.7163 -0.1671 40 1 10.9704 3.2810 0.6095 41 1 15.6936 2.4390 -3.8150 42 1 15.0665 3.9455 -4.5264 43 1 16.0299 4.0011 -3.0309 44 1 16.3096 2.3133 -1.8192 45 1 17.2953 0.3710 -0.2629 46 1 17.4798 2.7793 1.3482 47 1 15.7233 -1.0057 1.9134 48 1 17.9882 -0.3981 2.5607 49 1 14.5247 0.9101 1.7910 50 1 12.3360 1.7548 1.0467 51 1 6.4748 4.4877 1.1082 52 1 5.3781 5.0167 -0.2402 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17523010_60476.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:26:22 Heat of formation + Delta-G solvation = -168.639821 kcal Electronic energy + Delta-G solvation = -33765.642158 eV Core-core repulsion = 28892.106809 eV Total energy + Delta-G solvation = -4873.535349 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -41.84395 -41.54511 -41.18095 -39.92713 -39.01284 -38.76832 -37.54891 -36.92604 -35.15751 -33.41919 -32.01950 -31.46593 -29.79320 -28.99104 -28.42262 -26.98292 -26.70598 -26.17839 -23.87806 -23.25657 -22.56914 -21.89172 -21.56673 -20.41391 -19.77401 -18.59681 -18.53809 -18.32581 -17.88614 -17.66687 -17.55304 -17.50038 -17.19090 -16.92268 -16.60728 -16.15042 -16.10920 -15.83250 -15.68836 -15.63711 -15.37453 -15.10564 -14.96172 -14.61425 -14.41222 -14.25549 -14.12122 -13.75021 -13.69804 -13.60041 -13.53244 -13.40767 -13.09411 -12.76676 -12.63540 -12.52102 -12.30050 -12.18549 -12.11818 -12.03864 -11.98927 -11.78630 -11.76606 -11.63888 -11.37505 -11.21072 -10.88575 -10.47608 -10.16178 -9.80169 -8.86166 -5.07707 0.16421 0.28705 1.21291 1.25360 1.41280 1.48528 1.59954 1.72341 1.93965 2.31378 2.50949 2.56058 3.34080 3.36361 3.40858 3.44719 3.62262 3.62821 3.70096 3.72831 3.75440 3.78581 3.90999 3.92390 4.02371 4.11482 4.12278 4.15400 4.23572 4.24633 4.28828 4.33067 4.33192 4.41206 4.47794 4.55400 4.59027 4.62295 4.65003 4.65439 4.73931 4.75669 4.88546 4.97725 4.98687 5.07089 5.08492 5.17510 5.35948 5.41046 5.49348 5.54877 5.95718 6.31885 6.53346 6.54346 6.74437 7.10447 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.362 6.362 3 C 0.457 3.543 4 O -0.507 6.507 5 C -0.113 4.113 6 C -0.100 4.100 7 C -0.112 4.112 8 H 0.093 0.907 9 C -0.149 4.149 10 C 0.120 3.880 11 H 0.106 0.894 12 N -0.711 5.711 13 C 0.518 3.482 14 O -0.507 6.507 15 C 0.039 3.961 16 O -0.277 6.277 17 C 0.104 3.896 18 C 0.107 3.893 19 O -0.302 6.302 20 C 0.025 3.975 21 C -0.146 4.146 22 C -0.115 4.115 23 C -0.066 4.066 24 O -0.540 6.540 25 Si 0.689 3.311 26 C -0.112 4.112 27 C -0.169 4.169 28 C -0.139 4.139 29 H 0.063 0.937 30 H 0.064 0.936 31 H 0.103 0.897 32 H 0.106 0.894 33 H 0.106 0.894 34 H 0.075 0.925 35 H 0.076 0.924 36 H 0.094 0.906 37 H 0.073 0.927 38 H 0.402 0.598 39 H 0.094 0.906 40 H 0.095 0.905 41 H 0.055 0.945 42 H 0.103 0.897 43 H 0.057 0.943 44 H 0.140 0.860 45 H 0.113 0.887 46 H 0.379 0.621 47 H -0.257 1.257 48 H -0.255 1.255 49 H 0.132 0.868 50 H 0.140 0.860 51 H 0.076 0.924 52 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.971 -2.420 5.880 6.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.300 3.700 4 O -0.395 6.395 5 C -0.150 4.150 6 C -0.137 4.137 7 C -0.130 4.130 8 H 0.111 0.889 9 C -0.188 4.188 10 C 0.015 3.985 11 H 0.124 0.876 12 N -0.365 5.365 13 C 0.302 3.698 14 O -0.380 6.380 15 C -0.040 4.040 16 O -0.189 6.189 17 C 0.058 3.942 18 C 0.061 3.939 19 O -0.215 6.215 20 C -0.070 4.070 21 C -0.165 4.165 22 C -0.116 4.116 23 C -0.177 4.177 24 O -0.346 6.346 25 Si 0.590 3.410 26 C -0.130 4.130 27 C -0.188 4.188 28 C -0.177 4.177 29 H 0.082 0.918 30 H 0.082 0.918 31 H 0.121 0.879 32 H 0.125 0.875 33 H 0.124 0.876 34 H 0.094 0.906 35 H 0.095 0.905 36 H 0.113 0.887 37 H 0.092 0.908 38 H 0.237 0.763 39 H 0.112 0.888 40 H 0.113 0.887 41 H 0.074 0.926 42 H 0.122 0.878 43 H 0.076 0.924 44 H 0.158 0.842 45 H 0.130 0.870 46 H 0.227 0.773 47 H -0.182 1.182 48 H -0.180 1.180 49 H 0.150 0.850 50 H 0.157 0.843 51 H 0.095 0.905 52 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -0.935 -2.630 4.735 5.496 hybrid contribution -0.122 -0.443 -0.028 0.460 sum -1.057 -3.073 4.707 5.719 Atomic orbital electron populations 1.23303 0.75960 1.03949 1.02701 1.86511 1.23788 1.33567 1.84025 1.23924 0.92427 0.81350 0.72251 1.90697 1.67357 1.36357 1.45047 1.21437 0.87221 1.00386 1.05996 1.21433 0.94426 0.93689 1.04167 1.22647 0.94790 0.97605 0.97962 0.88882 1.23555 0.98227 1.00074 0.96900 1.21850 0.83167 0.96840 0.96669 0.87634 1.45468 1.07223 1.61214 1.22571 1.20028 0.84012 0.79873 0.85844 1.90806 1.85369 1.41929 1.19850 1.22471 0.85449 1.02146 0.93935 1.86279 1.13540 1.75671 1.43416 1.18276 0.84154 0.98600 0.93133 1.18285 0.91584 0.97208 0.86795 1.86251 1.34782 1.72940 1.27495 1.23135 0.86568 1.01730 0.95599 1.20940 0.95763 1.01899 0.97896 1.20039 0.95704 1.00884 0.94979 1.25037 0.88428 0.94398 1.09821 1.86503 1.46477 1.36961 1.64623 0.94760 0.81266 0.82876 0.82056 1.20662 0.91852 1.01126 0.99379 1.20989 0.99371 1.02986 0.95476 1.23373 0.97413 0.97230 0.99729 0.91776 0.91761 0.87906 0.87533 0.87600 0.90590 0.90526 0.88722 0.90834 0.76334 0.88795 0.88685 0.92623 0.87845 0.92413 0.84223 0.86981 0.77321 1.18188 1.17975 0.85030 0.84269 0.90544 0.88235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.39 10.57 -39.27 -0.41 -0.81 16 3 C 0.46 0.54 7.96 36.01 0.29 0.82 16 4 O -0.51 -2.17 15.73 -18.75 -0.30 -2.46 16 5 C -0.11 0.27 5.80 -27.89 -0.16 0.11 16 6 C -0.10 0.23 4.34 -26.73 -0.12 0.11 16 7 C -0.11 0.41 3.52 -89.80 -0.32 0.09 16 8 H 0.09 -0.46 8.13 -51.93 -0.42 -0.88 16 9 C -0.15 0.34 7.43 -25.91 -0.19 0.14 16 10 C 0.12 -0.17 4.32 -67.11 -0.29 -0.46 16 11 H 0.11 0.09 7.46 -51.93 -0.39 -0.29 16 12 N -0.71 1.56 5.26 -53.01 -0.28 1.28 16 13 C 0.52 0.66 7.91 -10.99 -0.09 0.58 16 14 O -0.51 -3.41 16.10 -14.36 -0.23 -3.64 16 15 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 16 O -0.28 -1.01 9.45 -47.33 -0.45 -1.46 16 17 C 0.10 0.25 6.70 -39.12 -0.26 -0.01 16 18 C 0.11 0.35 6.70 -39.12 -0.26 0.08 16 19 O -0.30 -1.31 10.28 -34.22 -0.35 -1.66 16 20 C 0.02 0.01 9.81 101.05 0.99 1.00 16 21 C -0.15 -0.21 8.67 -39.46 -0.34 -0.55 16 22 C -0.12 -0.02 5.35 -104.61 -0.56 -0.58 16 23 C -0.07 0.03 2.80 36.01 0.10 0.13 16 24 O -0.54 0.01 12.83 -35.23 -0.45 -0.44 16 25 Si 0.69 -1.08 29.79 -169.99 -5.06 -6.14 16 26 C -0.11 0.11 8.66 -39.57 -0.34 -0.23 16 27 C -0.17 0.11 9.04 -39.46 -0.36 -0.25 16 28 C -0.14 0.44 7.39 -25.91 -0.19 0.25 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.06 -0.03 8.13 -51.92 -0.42 -0.46 16 31 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 32 H 0.11 -0.37 8.14 -51.93 -0.42 -0.80 16 33 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 34 H 0.08 -0.11 8.10 -51.93 -0.42 -0.53 16 35 H 0.08 -0.08 7.81 -51.93 -0.41 -0.49 16 36 H 0.09 -0.19 7.90 -51.93 -0.41 -0.60 16 37 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.40 -2.22 8.70 -40.82 -0.36 -2.58 16 39 H 0.09 -0.36 7.66 -51.93 -0.40 -0.76 16 40 H 0.10 -0.38 7.66 -51.93 -0.40 -0.78 16 41 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 42 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.06 -0.04 7.67 -51.93 -0.40 -0.44 16 44 H 0.14 0.07 6.30 -52.49 -0.33 -0.26 16 45 H 0.11 -0.01 7.96 -51.93 -0.41 -0.42 16 46 H 0.38 -1.46 8.70 45.56 0.40 -1.06 16 47 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 48 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 49 H 0.13 -0.45 4.89 -52.49 -0.26 -0.70 16 50 H 0.14 -0.55 6.30 -52.49 -0.33 -0.88 16 51 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 52 H 0.10 -0.29 8.10 -51.93 -0.42 -0.71 16 LS Contribution 432.55 15.07 6.52 6.52 Total: 0.00 -13.33 432.55 -9.79 -23.12 By element: Atomic # 1 Polarization: -8.82 SS G_CDS: -7.93 Total: -16.75 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: -0.85 Total: 2.44 kcal Atomic # 7 Polarization: 1.56 SS G_CDS: -0.28 Total: 1.28 kcal Atomic # 8 Polarization: -8.27 SS G_CDS: -2.19 Total: -10.46 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.06 Total: -6.14 kcal Total LS contribution 6.52 Total: 6.52 kcal Total: -13.33 -9.79 -23.12 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17523010_60476.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.520 kcal (2) G-P(sol) polarization free energy of solvation -13.327 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -158.847 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.793 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.120 kcal (6) G-S(sol) free energy of system = (1) + (5) -168.640 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds