Wall clock time and date at job start Sun Mar 7 2021 08:09:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34230 * 116.99447 * 2 1 4 4 O 1.20816 * 120.00581 * 0.02562 * 3 2 1 5 5 C 1.50700 * 119.99656 * 180.02562 * 3 2 1 6 6 C 1.55211 * 108.15472 * 80.00084 * 5 3 2 7 7 Si 1.90177 * 98.91436 * 141.87724 * 6 5 3 8 8 C 1.86293 * 111.97294 * 88.89230 * 7 6 5 9 9 C 1.86307 * 111.96934 * 215.24242 * 7 6 5 10 10 C 1.90185 * 96.36885 * 332.09511 * 7 6 5 11 11 N 1.45027 * 108.15504 * 206.38661 * 5 3 2 12 12 C 1.34770 * 120.85641 * 59.20469 * 11 5 3 13 13 O 1.21282 * 120.00881 * 0.02562 * 12 11 5 14 14 C 1.50707 * 119.99463 * 180.02562 * 12 11 5 15 15 N 1.46505 * 109.46760 * 180.02562 * 14 12 11 16 16 C 1.36832 * 125.06149 * 265.02083 * 15 14 12 17 17 C 1.34239 * 109.93835 * 179.97438 * 16 15 14 18 18 C 1.50697 * 126.49813 * 180.02562 * 17 16 15 19 19 O 1.42898 * 109.46981 * 104.97858 * 18 17 16 20 20 Si 1.86306 * 109.47488 * 344.97861 * 18 17 16 21 21 H 1.48495 * 109.46809 * 59.99606 * 20 18 17 22 22 H 1.48499 * 109.46958 * 180.02562 * 20 18 17 23 23 H 1.48503 * 109.46889 * 300.00051 * 20 18 17 24 24 C 1.46482 * 106.99818 * 0.02562 * 17 16 15 25 25 C 1.39595 * 134.03842 * 180.02562 * 24 17 16 26 26 C 1.36661 * 119.76729 * 179.97438 * 25 24 17 27 27 C 1.38793 * 120.52524 * 359.97438 * 26 25 24 28 28 C 1.37782 * 120.66858 * 0.02562 * 27 26 25 29 29 C 1.37688 * 125.06273 * 84.71899 * 15 14 12 30 30 H 1.08992 * 109.47344 * 59.99937 * 1 2 3 31 31 H 1.09002 * 109.46554 * 179.97438 * 1 2 3 32 32 H 1.08994 * 109.47076 * 299.99234 * 1 2 3 33 33 H 1.09004 * 108.00384 * 323.17811 * 5 3 2 34 34 H 1.09002 * 111.51680 * 259.32050 * 6 5 3 35 35 H 1.09003 * 111.51240 * 24.43775 * 6 5 3 36 36 H 1.09001 * 109.47366 * 59.99721 * 8 7 6 37 37 H 1.09002 * 109.47391 * 179.97438 * 8 7 6 38 38 H 1.08996 * 109.47322 * 299.99922 * 8 7 6 39 39 H 1.09002 * 109.47349 * 59.99666 * 9 7 6 40 40 H 1.08996 * 109.47248 * 179.97438 * 9 7 6 41 41 H 1.09002 * 109.47372 * 300.00060 * 9 7 6 42 42 H 1.09002 * 111.25475 * 271.06126 * 10 7 6 43 43 H 1.09002 * 111.32475 * 146.46336 * 10 7 6 44 44 H 1.08996 * 109.47038 * 299.99548 * 14 12 11 45 45 H 1.08993 * 109.47353 * 60.00014 * 14 12 11 46 46 H 1.07999 * 125.03105 * 359.96823 * 16 15 14 47 47 H 1.09008 * 109.47174 * 224.97935 * 18 17 16 48 48 H 0.96697 * 113.99896 * 299.99644 * 19 18 17 49 49 H 1.07999 * 120.11868 * 359.97438 * 25 24 17 50 50 H 1.07998 * 119.74114 * 180.02562 * 26 25 24 51 51 H 1.08010 * 119.66322 * 179.97438 * 27 26 25 52 52 H 1.08002 * 120.11159 * 179.97438 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2750 -0.0006 6 6 4.0620 1.0449 -1.4533 7 14 5.4948 2.2952 -1.4772 8 6 7.0922 1.5362 -0.8919 9 6 5.6865 3.1037 -3.1447 10 6 4.7584 3.4846 -0.1888 11 7 3.9531 2.5313 0.6120 12 6 3.5903 2.8245 1.8764 13 8 2.9321 2.0329 2.5176 14 6 4.0025 4.1361 2.4936 15 7 3.4891 4.2138 3.8636 16 6 2.3165 4.8159 4.2306 17 6 2.1427 4.7089 5.5574 18 6 0.9789 5.2391 6.3545 19 8 0.1227 4.1566 6.7249 20 14 0.0239 6.4609 5.3220 21 1 -0.4801 5.7874 4.0982 22 1 -1.1225 6.9837 6.1078 23 1 0.9137 7.5858 4.9371 24 6 3.2987 3.9791 6.0832 25 6 3.6864 3.5644 7.3586 26 6 4.8584 2.8810 7.5228 27 6 5.6666 2.5951 6.4313 28 6 5.3033 2.9950 5.1638 29 6 4.1118 3.6867 4.9727 30 1 -0.3633 0.5138 -0.8899 31 1 -0.3632 -1.0277 -0.0005 32 1 -0.3633 0.5137 0.8900 33 1 3.9464 0.4638 0.6204 34 1 4.4190 0.0251 -1.5970 35 1 3.2945 1.3025 -2.1831 36 1 7.3575 0.7018 -1.5413 37 1 7.8833 2.2855 -0.9224 38 1 6.9709 1.1769 0.1299 39 1 4.7683 3.6329 -3.3997 40 1 6.5158 3.8104 -3.1127 41 1 5.8873 2.3412 -3.8973 42 1 4.1270 4.2372 -0.6611 43 1 5.5389 3.9480 0.4147 44 1 5.0902 4.2044 2.5092 45 1 3.5952 4.9584 1.9054 46 1 1.6322 5.3050 3.5531 47 1 1.3489 5.7334 7.2528 48 1 -0.2439 3.6704 5.9737 49 1 3.0623 3.7829 8.2125 50 1 5.1577 2.5600 8.5096 51 1 6.5903 2.0545 6.5771 52 1 5.9392 2.7681 4.3209 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567684_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:09:05 Heat of formation + Delta-G solvation = -103.620455 kcal Electronic energy + Delta-G solvation = -35628.069130 eV Core-core repulsion = 31103.707941 eV Total energy + Delta-G solvation = -4524.361189 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 390.162 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.51256 -41.81553 -40.37905 -38.00448 -37.73260 -37.34274 -36.80282 -34.14271 -32.68060 -31.15363 -30.08997 -29.62272 -28.91706 -28.84305 -28.55994 -27.71901 -25.84264 -24.67898 -23.60644 -22.80764 -22.03352 -20.63189 -20.26872 -18.95167 -18.68357 -18.39436 -17.81145 -17.68902 -17.14799 -17.07708 -16.80449 -16.29467 -16.16953 -15.88403 -15.48429 -15.21024 -15.10867 -14.71110 -14.66569 -14.49770 -14.43499 -14.38036 -14.31020 -14.20479 -14.16303 -13.96912 -13.77626 -13.64626 -13.57557 -13.52448 -13.33773 -13.11992 -12.77808 -12.56568 -12.41373 -12.25802 -12.06143 -11.89361 -11.79941 -11.68772 -11.56560 -11.50434 -11.31246 -11.03486 -10.84445 -10.37525 -10.16466 -9.90653 -8.98155 -8.48974 0.31342 0.81207 0.84173 1.08770 1.27789 1.30186 1.35454 1.38451 1.51210 1.54224 1.59572 1.75846 1.80187 1.89272 2.00901 2.14249 3.09780 3.21129 3.46378 3.54079 3.69165 3.72370 3.79999 3.85405 3.89089 3.96538 4.11323 4.16065 4.22640 4.31639 4.34882 4.38382 4.40212 4.40860 4.41712 4.43816 4.49863 4.54140 4.63890 4.64236 4.68829 4.76126 4.85129 4.94272 5.02887 5.10262 5.17316 5.23846 5.29488 5.46701 5.68250 5.85053 5.88832 5.90919 5.94458 6.29474 6.40028 6.78426 6.79011 6.93386 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.356 6.356 3 C 0.459 3.541 4 O -0.503 6.503 5 C 0.157 3.843 6 C -0.397 4.397 7 Si 1.007 2.993 8 C -0.442 4.442 9 C -0.441 4.441 10 C -0.196 4.196 11 N -0.585 5.585 12 C 0.501 3.499 13 O -0.509 6.509 14 C 0.100 3.900 15 N -0.466 5.466 16 C 0.062 3.938 17 C -0.197 4.197 18 C -0.041 4.041 19 O -0.540 6.540 20 Si 0.942 3.058 21 H -0.254 1.254 22 H -0.250 1.250 23 H -0.250 1.250 24 C -0.084 4.084 25 C -0.064 4.064 26 C -0.147 4.147 27 C -0.096 4.096 28 C -0.129 4.129 29 C 0.109 3.891 30 H 0.062 0.938 31 H 0.103 0.897 32 H 0.063 0.937 33 H 0.109 0.891 34 H 0.112 0.888 35 H 0.096 0.904 36 H 0.079 0.921 37 H 0.078 0.922 38 H 0.074 0.926 39 H 0.076 0.924 40 H 0.077 0.923 41 H 0.078 0.922 42 H 0.088 0.912 43 H 0.097 0.903 44 H 0.119 0.881 45 H 0.123 0.877 46 H 0.164 0.836 47 H 0.114 0.886 48 H 0.375 0.625 49 H 0.124 0.876 50 H 0.123 0.877 51 H 0.125 0.875 52 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.731 0.727 -6.969 9.052 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.272 6.272 3 C 0.300 3.700 4 O -0.390 6.390 5 C 0.051 3.949 6 C -0.481 4.481 7 Si 1.202 2.798 8 C -0.552 4.552 9 C -0.551 4.551 10 C -0.363 4.363 11 N -0.321 5.321 12 C 0.287 3.713 13 O -0.383 6.383 14 C -0.026 4.026 15 N -0.149 5.149 16 C -0.063 4.063 17 C -0.204 4.204 18 C -0.153 4.153 19 O -0.345 6.345 20 Si 0.764 3.236 21 H -0.178 1.178 22 H -0.173 1.173 23 H -0.173 1.173 24 C -0.088 4.088 25 C -0.082 4.082 26 C -0.166 4.166 27 C -0.115 4.115 28 C -0.149 4.149 29 C 0.005 3.995 30 H 0.081 0.919 31 H 0.121 0.879 32 H 0.082 0.918 33 H 0.127 0.873 34 H 0.131 0.869 35 H 0.115 0.885 36 H 0.098 0.902 37 H 0.097 0.903 38 H 0.094 0.906 39 H 0.095 0.905 40 H 0.096 0.904 41 H 0.097 0.903 42 H 0.107 0.893 43 H 0.115 0.885 44 H 0.137 0.863 45 H 0.141 0.859 46 H 0.181 0.819 47 H 0.132 0.868 48 H 0.221 0.779 49 H 0.142 0.858 50 H 0.141 0.859 51 H 0.143 0.857 52 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 4.909 1.403 -6.797 8.501 hybrid contribution -0.380 -0.477 -0.404 0.732 sum 4.528 0.925 -7.202 8.557 Atomic orbital electron populations 1.23279 0.75970 1.03883 1.02529 1.86480 1.23690 1.33129 1.83894 1.24070 0.92246 0.81750 0.71948 1.90638 1.66853 1.36446 1.45071 1.20185 0.88034 0.88406 0.98229 1.26826 1.14808 1.13610 0.92881 0.80394 0.67155 0.65521 0.66743 1.25976 1.14893 1.07636 1.06664 1.25954 1.05503 1.07823 1.15835 1.27265 1.00213 1.01355 1.07471 1.47644 1.54151 1.17681 1.12598 1.21021 0.79901 0.89111 0.81230 1.90809 1.37031 1.49260 1.61200 1.21534 1.02104 0.96814 0.82169 1.43249 1.19078 1.48169 1.04444 1.21562 0.88907 1.00270 0.95581 1.20625 0.98762 1.08343 0.92710 1.24234 0.90999 0.95640 1.04395 1.86493 1.64547 1.47041 1.36408 0.85876 0.80219 0.78561 0.78939 1.17765 1.17326 1.17296 1.18909 0.94764 1.02329 0.92814 1.20314 0.96001 0.96618 0.95280 1.20667 0.95455 1.01516 0.98920 1.20813 0.99658 0.99442 0.91623 1.19941 0.94993 1.02151 0.97844 1.18185 0.95743 0.99929 0.85690 0.91946 0.87856 0.91841 0.87288 0.86905 0.88499 0.90183 0.90327 0.90642 0.90520 0.90362 0.90258 0.89348 0.88469 0.86295 0.85901 0.81868 0.86833 0.77855 0.85787 0.85921 0.85748 0.86796 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.06 10.56 101.05 1.07 1.13 16 2 O -0.36 -1.36 10.57 -39.26 -0.41 -1.77 16 3 C 0.46 1.90 5.56 36.01 0.20 2.10 16 4 O -0.50 -3.36 15.80 -19.69 -0.31 -3.67 16 5 C 0.16 0.06 2.53 -68.70 -0.17 -0.11 16 6 C -0.40 1.32 5.48 38.33 0.21 1.53 16 7 Si 1.01 -6.01 13.66 -169.99 -2.32 -8.33 16 8 C -0.44 2.32 8.65 101.05 0.87 3.20 16 9 C -0.44 2.35 8.65 101.05 0.87 3.23 16 10 C -0.20 0.83 5.48 60.82 0.33 1.16 16 11 N -0.58 0.06 2.52 -105.10 -0.27 -0.20 16 12 C 0.50 1.31 7.03 -10.98 -0.08 1.24 16 13 O -0.51 -3.67 15.46 5.54 0.09 -3.59 16 14 C 0.10 -0.01 5.23 -5.19 -0.03 -0.03 16 15 N -0.47 -1.43 2.27 -115.71 -0.26 -1.70 16 16 C 0.06 0.19 9.89 -16.73 -0.17 0.02 16 17 C -0.20 -0.73 5.57 -102.71 -0.57 -1.30 16 18 C -0.04 -0.09 3.06 36.00 0.11 0.02 16 19 O -0.54 -1.75 12.88 -35.23 -0.45 -2.21 16 20 Si 0.94 0.97 26.08 -169.99 -4.43 -3.46 16 21 H -0.25 -0.36 7.03 56.52 0.40 0.04 16 22 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 23 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 24 C -0.08 -0.42 6.35 -105.14 -0.67 -1.09 16 25 C -0.06 -0.26 10.05 -39.65 -0.40 -0.66 16 26 C -0.15 -0.43 9.97 -39.95 -0.40 -0.83 16 27 C -0.10 -0.24 10.01 -39.54 -0.40 -0.64 16 28 C -0.13 -0.40 10.00 -39.43 -0.39 -0.79 16 29 C 0.11 0.48 6.80 -83.99 -0.57 -0.09 16 30 H 0.06 0.07 8.13 -51.93 -0.42 -0.35 16 31 H 0.10 -0.10 8.14 -51.93 -0.42 -0.53 16 32 H 0.06 0.17 8.13 -51.93 -0.42 -0.25 16 33 H 0.11 0.04 8.14 -51.93 -0.42 -0.38 16 34 H 0.11 -0.54 8.06 -51.93 -0.42 -0.96 16 35 H 0.10 -0.28 7.76 -51.93 -0.40 -0.68 16 36 H 0.08 -0.42 7.96 -51.93 -0.41 -0.83 16 37 H 0.08 -0.43 7.96 -51.93 -0.41 -0.85 16 38 H 0.07 -0.33 7.96 -51.93 -0.41 -0.75 16 39 H 0.08 -0.36 7.96 -51.93 -0.41 -0.78 16 40 H 0.08 -0.43 7.96 -51.93 -0.41 -0.85 16 41 H 0.08 -0.41 7.96 -51.93 -0.41 -0.82 16 42 H 0.09 -0.39 8.05 -51.93 -0.42 -0.81 16 43 H 0.10 -0.63 7.08 -51.93 -0.37 -1.00 16 44 H 0.12 -0.36 7.58 -51.93 -0.39 -0.75 16 45 H 0.12 -0.30 8.10 -51.93 -0.42 -0.72 16 46 H 0.16 0.16 6.29 -52.49 -0.33 -0.17 16 47 H 0.11 0.15 7.96 -51.92 -0.41 -0.27 16 48 H 0.37 0.28 8.70 45.56 0.40 0.67 16 49 H 0.12 0.37 8.06 -52.49 -0.42 -0.06 16 50 H 0.12 0.11 8.06 -52.49 -0.42 -0.31 16 51 H 0.12 0.02 8.06 -52.48 -0.42 -0.40 16 52 H 0.11 0.11 8.06 -52.49 -0.42 -0.31 16 LS Contribution 433.53 15.07 6.53 6.53 Total: 0.00 -13.00 433.53 -9.45 -22.45 By element: Atomic # 1 Polarization: -4.71 SS G_CDS: -7.43 Total: -12.14 kcal Atomic # 6 Polarization: 8.26 SS G_CDS: -0.17 Total: 8.08 kcal Atomic # 7 Polarization: -1.37 SS G_CDS: -0.53 Total: -1.90 kcal Atomic # 8 Polarization: -10.15 SS G_CDS: -1.09 Total: -11.24 kcal Atomic # 14 Polarization: -5.03 SS G_CDS: -6.76 Total: -11.79 kcal Total LS contribution 6.53 Total: 6.53 kcal Total: -13.00 -9.45 -22.45 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567684_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.172 kcal (2) G-P(sol) polarization free energy of solvation -13.001 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.172 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.448 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.449 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.620 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds