Wall clock time and date at job start Sun Mar 7 2021 07:04:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37870 * 126.45754 * 2 1 4 4 C 1.46678 * 126.23313 * 0.03977 * 3 2 1 5 5 O 1.21692 * 120.00113 * 359.96802 * 4 3 2 6 6 N 1.34784 * 119.99686 * 179.97438 * 4 3 2 7 7 C 1.46506 * 119.99513 * 180.02562 * 6 4 3 8 8 H 1.09003 * 112.84689 * 336.18739 * 7 6 4 9 9 C 1.53777 * 113.61645 * 107.50114 * 7 6 4 10 10 C 1.53782 * 87.08286 * 89.11162 * 9 7 6 11 11 H 1.08994 * 113.61402 * 270.88407 * 10 9 7 12 12 C 1.52993 * 113.68973 * 139.99273 * 10 9 7 13 13 N 1.46500 * 109.47436 * 87.46515 * 12 10 9 14 14 C 1.35309 * 125.87227 * 124.99804 * 13 12 10 15 15 C 1.35348 * 106.17946 * 180.02562 * 14 13 12 16 16 N 1.33775 * 106.49359 * 359.97438 * 15 14 13 17 17 N 1.28632 * 108.88542 * 359.73680 * 16 15 14 18 18 C 1.53777 * 87.08056 * 25.43254 * 10 9 7 19 19 N 1.37655 * 107.53439 * 180.02562 * 3 2 1 20 20 C 1.35537 * 108.64132 * 0.02562 * 19 3 2 21 21 C 1.50699 * 125.55998 * 179.97438 * 20 19 3 22 22 O 1.42901 * 109.47308 * 65.00214 * 21 20 19 23 23 Si 1.86306 * 109.46787 * 184.99971 * 21 20 19 24 24 C 1.35447 * 108.87313 * 359.97438 * 20 19 3 25 25 H 1.09000 * 109.46822 * 89.99630 * 1 2 3 26 26 H 1.08994 * 109.47466 * 209.99745 * 1 2 3 27 27 H 1.09000 * 109.47150 * 330.00367 * 1 2 3 28 28 H 0.96998 * 120.00408 * 359.97438 * 6 4 3 29 29 H 1.08995 * 113.61319 * 203.66500 * 9 7 6 30 30 H 1.08999 * 113.61292 * 334.56018 * 9 7 6 31 31 H 1.09004 * 109.47201 * 207.46352 * 12 10 9 32 32 H 1.09004 * 109.47484 * 327.46765 * 12 10 9 33 33 H 1.08004 * 126.91281 * 0.02562 * 14 13 12 34 34 H 1.07997 * 126.75707 * 180.02562 * 15 14 13 35 35 H 1.09001 * 113.61502 * 220.01709 * 18 10 9 36 36 H 1.08999 * 113.61329 * 89.11694 * 18 10 9 37 37 H 0.97000 * 125.68198 * 179.73388 * 19 3 2 38 38 H 1.09005 * 109.47406 * 304.99909 * 21 20 19 39 39 H 0.96696 * 114.00100 * 180.02562 * 22 21 20 40 40 H 1.48502 * 109.99602 * 178.68331 * 23 21 20 41 41 H 1.48498 * 110.00017 * 299.99908 * 23 21 20 42 42 H 1.07996 * 126.06698 * 179.97438 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8898 2.5092 0.0008 5 8 0.7026 2.7766 0.0010 6 7 2.8038 3.4999 0.0012 7 6 2.3678 4.8986 0.0026 8 1 1.3643 5.0295 -0.4024 9 6 2.5896 5.6117 1.3469 10 6 3.9856 5.9916 0.8255 11 1 4.7521 5.2498 1.0495 12 6 4.4117 7.4149 1.1903 13 7 5.0587 7.4093 2.5047 14 6 6.2925 7.8900 2.7831 15 6 6.4880 7.6834 4.1064 16 7 5.3785 7.0946 4.5668 17 7 4.5488 6.9516 3.5943 18 6 3.4036 5.8671 -0.5924 19 7 3.6284 0.6625 -0.0006 20 6 3.6217 -0.6929 -0.0015 21 6 4.8433 -1.5753 -0.0029 22 8 5.5637 -1.3936 1.2178 23 14 4.3219 -3.3573 -0.1569 24 6 2.3379 -1.1247 -0.0010 25 1 -0.3633 0.0001 -1.0277 26 1 -0.3634 -0.8899 0.5138 27 1 -0.3633 0.8900 0.5138 28 1 3.7500 3.2868 0.0014 29 1 1.9329 6.4679 1.5005 30 1 2.6118 4.9354 2.2014 31 1 5.1116 7.7877 0.4424 32 1 3.5339 8.0606 1.2203 33 1 6.9826 8.3467 2.0891 34 1 7.3664 7.9435 4.6783 35 1 4.0829 5.3971 -1.3036 36 1 2.9694 6.7933 -0.9690 37 1 4.4191 1.2243 -0.0044 38 1 5.4825 -1.3097 -0.8450 39 1 6.3642 -1.9316 1.2859 40 1 5.5190 -4.2355 -0.1915 41 1 3.4500 -3.7319 0.9853 42 1 2.0136 -2.1548 -0.0019 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567714_13940406.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:03 Heat of formation + Delta-G solvation = 109.452302 kcal Electronic energy + Delta-G solvation = -26133.641143 eV Core-core repulsion = 22312.501377 eV Total energy + Delta-G solvation = -3821.139767 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.148 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -44.17294 -42.56651 -41.16532 -39.31579 -37.92067 -35.87263 -34.39953 -33.33833 -31.95930 -31.72999 -29.71760 -28.14194 -26.98937 -26.94897 -24.86743 -23.56634 -22.83047 -22.39519 -21.54515 -20.56782 -20.31900 -19.48083 -18.75335 -18.65909 -17.45310 -17.13504 -16.83719 -16.38189 -16.19970 -15.94320 -15.77712 -15.50940 -15.23589 -15.03697 -14.84034 -14.76964 -14.16590 -14.04293 -13.94338 -13.68900 -13.49901 -13.25328 -13.24131 -13.05400 -12.69489 -12.49581 -12.40649 -11.98332 -11.96193 -11.81160 -11.51414 -11.03547 -11.00626 -10.72159 -10.33250 -10.22336 -9.78004 -9.12816 -5.00422 0.37183 0.64329 1.08963 1.31441 1.52200 1.56475 1.68088 1.87679 1.93746 2.12903 2.36378 3.02256 3.10259 3.16771 3.33253 3.43850 3.59184 3.67197 3.78884 3.79425 3.83935 4.01741 4.07400 4.11378 4.18928 4.28727 4.36901 4.39572 4.47661 4.61763 4.67075 4.76074 4.77999 4.88699 4.90467 4.96734 5.07072 5.21883 5.26463 5.37462 5.49476 5.58728 5.69717 5.93517 6.19359 6.26279 6.41947 7.13111 7.59253 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.061 4.061 3 C -0.057 4.057 4 C 0.595 3.405 5 O -0.517 6.517 6 N -0.717 5.717 7 C 0.122 3.878 8 H 0.112 0.888 9 C -0.138 4.138 10 C -0.126 4.126 11 H 0.095 0.905 12 C 0.123 3.877 13 N -0.291 5.291 14 C -0.054 4.054 15 C -0.052 4.052 16 N -0.273 5.273 17 N -0.078 5.078 18 C -0.134 4.134 19 N -0.526 5.526 20 C 0.074 3.926 21 C -0.062 4.062 22 O -0.541 6.541 23 Si 0.714 3.286 24 C -0.197 4.197 25 H 0.071 0.929 26 H 0.065 0.935 27 H 0.081 0.919 28 H 0.393 0.607 29 H 0.098 0.902 30 H 0.079 0.921 31 H 0.109 0.891 32 H 0.104 0.896 33 H 0.190 0.810 34 H 0.190 0.810 35 H 0.080 0.920 36 H 0.104 0.896 37 H 0.414 0.586 38 H 0.077 0.923 39 H 0.384 0.616 40 H -0.259 1.259 41 H -0.249 1.249 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.447 0.817 -7.640 9.418 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.069 4.069 3 C -0.170 4.170 4 C 0.384 3.616 5 O -0.393 6.393 6 N -0.368 5.368 7 C 0.017 3.983 8 H 0.130 0.870 9 C -0.177 4.177 10 C -0.145 4.145 11 H 0.114 0.886 12 C 0.002 3.998 13 N -0.085 5.085 14 C -0.205 4.205 15 C -0.209 4.209 16 N -0.139 5.139 17 N -0.058 5.058 18 C -0.173 4.173 19 N -0.122 5.122 20 C -0.043 4.043 21 C -0.171 4.171 22 O -0.349 6.349 23 Si 0.612 3.388 24 C -0.221 4.221 25 H 0.090 0.910 26 H 0.084 0.916 27 H 0.100 0.900 28 H 0.227 0.773 29 H 0.116 0.884 30 H 0.098 0.902 31 H 0.127 0.873 32 H 0.122 0.878 33 H 0.207 0.793 34 H 0.207 0.793 35 H 0.098 0.902 36 H 0.123 0.877 37 H 0.252 0.748 38 H 0.095 0.905 39 H 0.233 0.767 40 H -0.184 1.184 41 H -0.173 1.173 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 2.962 0.110 -6.523 7.165 hybrid contribution 3.284 1.096 0.085 3.463 sum 6.246 1.206 -6.438 9.050 Atomic orbital electron populations 1.20399 0.88714 1.03304 1.02618 1.19921 0.96085 0.90194 1.00713 1.20155 0.83469 0.93414 1.19942 1.16990 0.85796 0.82876 0.75951 1.90843 1.15803 1.83055 1.49550 1.45545 1.09134 1.05616 1.76545 1.21810 0.99733 0.79643 0.97105 0.86972 1.23484 0.94902 1.01277 0.98033 1.22939 0.98729 0.95147 0.97726 0.88645 1.22236 0.99534 0.99295 0.78704 1.47553 1.12058 1.38839 1.10031 1.23740 0.90053 1.07365 0.99353 1.23690 0.99968 1.04127 0.93078 1.75184 1.01118 1.15710 1.21905 1.78364 1.21563 1.17708 0.88172 1.23353 0.98218 1.00541 0.95188 1.41814 1.07117 1.06547 1.56758 1.19787 0.94994 0.82503 1.07043 1.24599 0.92957 1.10442 0.89137 1.86592 1.42071 1.68229 1.37961 0.94335 0.83109 0.71732 0.89606 1.20572 0.90598 0.99248 1.11718 0.91030 0.91588 0.90018 0.77329 0.88405 0.90192 0.87310 0.87792 0.79295 0.79334 0.90169 0.87714 0.74840 0.90530 0.76714 1.18410 1.17300 0.83136 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.21 9.83 36.00 0.35 0.14 16 2 C -0.06 -0.18 6.21 -104.16 -0.65 -0.82 16 3 C -0.06 -0.14 7.06 -81.98 -0.58 -0.72 16 4 C 0.60 1.65 7.79 -12.85 -0.10 1.55 16 5 O -0.52 -3.04 14.40 5.20 0.07 -2.97 16 6 N -0.72 0.45 5.26 -54.32 -0.29 0.17 16 7 C 0.12 -0.17 4.33 -67.12 -0.29 -0.46 16 8 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 9 C -0.14 0.15 7.43 -25.92 -0.19 -0.05 16 10 C -0.13 0.41 3.64 -89.81 -0.33 0.08 16 11 H 0.10 -0.23 8.14 -51.93 -0.42 -0.65 16 12 C 0.12 -0.45 6.29 -4.05 -0.03 -0.48 16 13 N -0.29 -0.05 3.44 -61.26 -0.21 -0.26 16 14 C -0.05 0.05 11.57 -17.05 -0.20 -0.15 16 15 C -0.05 -0.07 12.05 -17.74 -0.21 -0.28 16 16 N -0.27 -1.42 12.41 30.23 0.38 -1.04 16 17 N -0.08 -0.32 12.94 60.35 0.78 0.46 16 18 C -0.13 0.60 7.39 -25.92 -0.19 0.41 16 19 N -0.53 -0.15 5.99 -5.70 -0.03 -0.19 16 20 C 0.07 0.06 6.50 -81.95 -0.53 -0.47 16 21 C -0.06 0.08 3.07 36.01 0.11 0.19 16 22 O -0.54 -0.01 12.86 -35.23 -0.45 -0.47 16 23 Si 0.71 -1.31 30.56 -169.99 -5.19 -6.51 16 24 C -0.20 -0.31 9.27 -39.98 -0.37 -0.68 16 25 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 26 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 27 H 0.08 0.32 6.48 -51.93 -0.34 -0.01 16 28 H 0.39 -1.14 7.83 -40.82 -0.32 -1.46 16 29 H 0.10 -0.15 7.90 -51.93 -0.41 -0.56 16 30 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 31 H 0.11 -0.70 8.07 -51.93 -0.42 -1.12 16 32 H 0.10 -0.44 7.85 -51.93 -0.41 -0.85 16 33 H 0.19 -0.95 8.06 -52.48 -0.42 -1.38 16 34 H 0.19 -0.30 8.06 -52.49 -0.42 -0.73 16 35 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 36 H 0.10 -0.60 8.10 -51.93 -0.42 -1.02 16 37 H 0.41 -0.95 8.19 -40.82 -0.33 -1.29 16 38 H 0.08 -0.26 7.96 -51.93 -0.41 -0.67 16 39 H 0.38 -1.53 8.74 45.56 0.40 -1.13 16 40 H -0.26 0.03 7.11 56.52 0.40 0.43 16 41 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 42 H 0.15 -0.04 6.19 -52.49 -0.32 -0.37 16 LS Contribution 356.09 15.07 5.37 5.37 Total: 0.00 -11.82 356.09 -8.31 -20.14 By element: Atomic # 1 Polarization: -7.44 SS G_CDS: -5.53 Total: -12.97 kcal Atomic # 6 Polarization: 1.47 SS G_CDS: -3.20 Total: -1.73 kcal Atomic # 7 Polarization: -1.49 SS G_CDS: 0.63 Total: -0.86 kcal Atomic # 8 Polarization: -3.05 SS G_CDS: -0.38 Total: -3.43 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.19 Total: -6.51 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -11.82 -8.31 -20.14 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567714_13940406.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 129.590 kcal (2) G-P(sol) polarization free energy of solvation -11.823 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 117.767 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.138 kcal (6) G-S(sol) free energy of system = (1) + (5) 109.452 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds