Wall clock time and date at job start Sun Mar 7 2021 07:04:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86300 * 109.47419 * 2 1 4 4 C 1.50703 * 109.47483 * 239.99907 * 2 1 3 5 5 C 1.38262 * 119.94363 * 300.00829 * 4 2 1 6 6 C 1.38145 * 120.05942 * 179.97438 * 5 4 2 7 7 C 1.38732 * 119.94244 * 359.97438 * 6 5 4 8 8 O 1.35896 * 120.05873 * 180.02562 * 7 6 5 9 9 C 1.42905 * 117.00039 * 179.97438 * 8 7 6 10 10 C 1.50699 * 109.46972 * 180.02562 * 9 8 7 11 11 O 1.21282 * 120.00041 * 0.02562 * 10 9 8 12 12 N 1.34779 * 120.00037 * 180.02562 * 10 9 8 13 13 C 1.46500 * 120.00169 * 180.02562 * 12 10 9 14 14 H 1.09005 * 112.84790 * 334.66860 * 13 12 10 15 15 C 1.53785 * 113.61395 * 105.85632 * 13 12 10 16 16 C 1.54056 * 86.98219 * 89.16453 * 15 13 12 17 17 H 1.09000 * 113.68862 * 270.87496 * 16 15 13 18 18 C 1.52999 * 113.61931 * 139.97788 * 16 15 13 19 19 N 1.46496 * 109.47182 * 87.50788 * 18 16 15 20 20 C 1.35311 * 125.87245 * 124.71084 * 19 18 16 21 21 C 1.35353 * 106.17846 * 179.90056 * 20 19 18 22 22 N 1.33777 * 106.49383 * 0.36201 * 21 20 19 23 23 N 1.28632 * 108.88504 * 359.76225 * 22 21 20 24 24 C 1.53772 * 113.61622 * 203.46775 * 13 12 10 25 25 C 1.38738 * 119.88718 * 0.27269 * 7 6 5 26 26 C 1.38148 * 119.94048 * 359.47662 * 25 7 6 27 27 H 0.96701 * 113.99302 * 60.00025 * 1 2 3 28 28 H 1.09003 * 109.46779 * 120.00343 * 2 1 3 29 29 H 1.48500 * 109.99961 * 298.67940 * 3 2 1 30 30 H 1.48506 * 109.99773 * 59.99912 * 3 2 1 31 31 H 1.08009 * 119.97583 * 359.96692 * 5 4 2 32 32 H 1.07999 * 120.03439 * 180.02562 * 6 5 4 33 33 H 1.09000 * 109.47187 * 300.00222 * 9 8 7 34 34 H 1.09001 * 109.46558 * 60.00270 * 9 8 7 35 35 H 0.96996 * 119.99844 * 359.97438 * 12 10 9 36 36 H 1.08998 * 113.61672 * 203.66296 * 15 13 12 37 37 H 1.09001 * 113.61836 * 334.57634 * 15 13 12 38 38 H 1.09001 * 109.47216 * 207.50447 * 18 16 15 39 39 H 1.09001 * 109.47355 * 327.50521 * 18 16 15 40 40 H 1.07997 * 126.91231 * 0.02562 * 20 19 18 41 41 H 1.07991 * 126.75311 * 180.12221 * 21 20 19 42 42 H 1.09006 * 113.61353 * 25.43058 * 24 13 12 43 43 H 1.08999 * 113.61864 * 156.33229 * 24 13 12 44 44 H 1.07995 * 120.02746 * 179.71906 * 25 7 6 45 45 H 1.08004 * 119.97067 * 180.22662 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.5966 -2.0341 -1.4482 6 6 2.0554 -2.6875 -2.5755 7 6 2.8524 -2.0142 -3.4900 8 8 3.3046 -2.6545 -4.6000 9 6 4.1199 -1.8988 -5.4980 10 6 4.5236 -2.7672 -6.6616 11 8 4.1495 -3.9196 -6.7168 12 7 5.3003 -2.2632 -7.6410 13 6 5.6923 -3.1072 -8.7725 14 1 5.6926 -4.1695 -8.5280 15 6 4.9465 -2.7755 -10.0759 16 6 6.0740 -1.7673 -10.3687 17 1 5.8880 -0.7725 -9.9639 18 6 6.5065 -1.7403 -11.8360 19 7 5.6638 -0.7980 -12.5763 20 6 6.1032 0.2457 -13.3170 21 6 4.9977 0.8421 -13.8212 22 7 3.9495 0.1481 -13.3637 23 7 4.3778 -0.8172 -12.6293 24 6 6.9758 -2.6366 -9.4765 25 6 3.1912 -0.6875 -3.2666 26 6 2.7255 -0.0371 -2.1403 27 1 -0.3932 0.4417 -0.7651 28 1 1.7923 -0.5139 0.8900 29 1 1.5880 2.4585 -1.2243 30 1 1.5615 2.4679 1.2085 31 1 0.9759 -2.5579 -0.7362 32 1 1.7933 -3.7213 -2.7454 33 1 3.5575 -1.0398 -5.8640 34 1 5.0119 -1.5533 -4.9754 35 1 5.5992 -1.3415 -7.5971 36 1 4.9093 -3.6057 -10.7812 37 1 3.9737 -2.3104 -9.9162 38 1 7.5480 -1.4257 -11.9022 39 1 6.4001 -2.7369 -12.2646 40 1 7.1295 0.5419 -13.4757 41 1 4.9676 1.7101 -14.4631 42 1 7.6402 -2.0596 -8.8332 43 1 7.4924 -3.4290 -10.0182 44 1 3.8152 -0.1625 -3.9746 45 1 2.9859 0.9967 -1.9678 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567714_2989410.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:21 Heat of formation + Delta-G solvation = 63.832758 kcal Electronic energy + Delta-G solvation = -28458.623256 eV Core-core repulsion = 24254.022856 eV Total energy + Delta-G solvation = -4204.600400 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -44.19013 -41.74189 -41.14905 -39.81279 -38.86071 -37.21992 -35.87561 -34.29837 -32.42972 -31.97304 -31.77928 -30.32319 -29.09570 -27.01078 -26.28536 -25.00344 -24.02710 -23.57317 -22.58863 -22.41113 -21.92359 -20.63036 -19.56847 -18.84708 -18.44369 -18.18033 -17.56767 -17.41906 -17.17606 -16.87202 -16.44458 -16.17650 -16.10433 -15.83375 -15.65999 -15.56893 -15.34697 -15.18537 -14.87967 -14.67822 -14.32793 -14.14111 -13.77445 -13.74258 -13.57459 -13.45132 -13.22721 -12.73677 -12.53053 -12.27106 -12.19187 -12.13247 -11.99729 -11.84507 -11.64893 -11.54554 -11.05815 -10.99152 -10.59968 -10.34926 -10.28382 -10.06365 -9.24992 -4.99151 0.26285 0.27634 0.62490 1.27542 1.29130 1.32964 1.38863 1.56959 1.66250 1.95025 2.44745 2.63148 2.98660 3.13366 3.30284 3.33879 3.37699 3.42469 3.55203 3.64557 3.69591 3.75687 3.81241 3.83225 3.83988 3.84642 4.05183 4.09843 4.24124 4.27234 4.36170 4.41284 4.44534 4.51896 4.55672 4.63314 4.64650 4.73951 4.84467 4.92130 4.92870 5.12378 5.20281 5.22351 5.32464 5.47937 5.56907 5.65335 6.14197 6.29576 6.40789 6.99217 7.57320 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.070 4.070 3 Si 0.682 3.318 4 C -0.155 4.155 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.519 3.481 11 O -0.507 6.507 12 N -0.712 5.712 13 C 0.121 3.879 14 H 0.110 0.890 15 C -0.138 4.138 16 C -0.126 4.126 17 H 0.098 0.902 18 C 0.123 3.877 19 N -0.291 5.291 20 C -0.054 4.054 21 C -0.052 4.052 22 N -0.273 5.273 23 N -0.079 5.079 24 C -0.133 4.133 25 C -0.207 4.207 26 C -0.075 4.075 27 H 0.376 0.624 28 H 0.118 0.882 29 H -0.261 1.261 30 H -0.257 1.257 31 H 0.135 0.865 32 H 0.136 0.864 33 H 0.095 0.905 34 H 0.097 0.903 35 H 0.402 0.598 36 H 0.097 0.903 37 H 0.080 0.920 38 H 0.109 0.891 39 H 0.104 0.896 40 H 0.190 0.810 41 H 0.190 0.810 42 H 0.082 0.918 43 H 0.104 0.896 44 H 0.131 0.869 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.867 3.750 -1.182 10.622 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.180 4.180 3 Si 0.583 3.417 4 C -0.156 4.156 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.089 3.911 8 O -0.200 6.200 9 C -0.038 4.038 10 C 0.304 3.696 11 O -0.380 6.380 12 N -0.365 5.365 13 C 0.016 3.984 14 H 0.128 0.872 15 C -0.177 4.177 16 C -0.145 4.145 17 H 0.116 0.884 18 C 0.002 3.998 19 N -0.085 5.085 20 C -0.205 4.205 21 C -0.209 4.209 22 N -0.139 5.139 23 N -0.059 5.059 24 C -0.172 4.172 25 C -0.225 4.225 26 C -0.093 4.093 27 H 0.223 0.777 28 H 0.136 0.864 29 H -0.186 1.186 30 H -0.182 1.182 31 H 0.153 0.847 32 H 0.154 0.846 33 H 0.113 0.887 34 H 0.114 0.886 35 H 0.237 0.763 36 H 0.116 0.884 37 H 0.099 0.901 38 H 0.127 0.873 39 H 0.122 0.878 40 H 0.207 0.793 41 H 0.207 0.793 42 H 0.101 0.899 43 H 0.123 0.877 44 H 0.149 0.851 45 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 8.151 2.471 -0.248 8.522 hybrid contribution 0.392 1.188 -1.071 1.647 sum 8.543 3.660 -1.319 9.387 Atomic orbital electron populations 1.86600 1.17806 1.79910 1.49343 1.24958 0.83884 1.10746 0.98408 0.95152 0.91669 0.74648 0.80231 1.20203 1.01863 0.95492 0.98015 1.20866 0.96751 0.93421 0.95848 1.20541 1.00377 1.01309 0.94128 1.19079 0.94310 0.91085 0.86662 1.86173 1.64346 1.38553 1.30926 1.22456 0.96509 0.94489 0.90393 1.20031 0.78593 0.88082 0.82886 1.90798 1.52494 1.17585 1.77160 1.45459 1.52960 1.15681 1.22446 1.21825 0.94883 0.96493 0.85177 0.87230 1.23534 0.98526 0.98775 0.96855 1.23004 0.98628 1.00256 0.92622 0.88374 1.22239 0.93392 0.92822 0.91374 1.47549 1.06624 1.21244 1.33059 1.23745 1.02552 0.92957 1.01199 1.23692 0.88347 1.03622 1.05200 1.75183 1.26893 1.02735 1.09115 1.78359 0.91632 1.18189 1.17692 1.23337 0.96174 0.99886 0.97782 1.21164 1.06266 0.94199 1.00891 1.20783 0.96115 0.99203 0.93161 0.77651 0.86418 1.18585 1.18237 0.84718 0.84602 0.88706 0.88564 0.76334 0.88432 0.90136 0.87271 0.87826 0.79279 0.79335 0.89943 0.87732 0.85095 0.85258 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.71 12.77 -35.23 -0.45 -1.16 16 2 C -0.07 0.02 2.82 36.01 0.10 0.12 16 3 Si 0.68 -0.77 29.78 -169.99 -5.06 -5.83 16 4 C -0.16 -0.03 5.39 -104.60 -0.56 -0.59 16 5 C -0.05 -0.04 9.60 -39.61 -0.38 -0.42 16 6 C -0.14 -0.24 9.99 -39.43 -0.39 -0.63 16 7 C 0.13 0.21 6.69 -39.21 -0.26 -0.06 16 8 O -0.29 -0.73 9.67 -39.33 -0.38 -1.11 16 9 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 10 C 0.52 0.39 7.91 -10.99 -0.09 0.31 16 11 O -0.51 -2.97 16.12 -14.35 -0.23 -3.21 16 12 N -0.71 1.87 5.26 -53.02 -0.28 1.59 16 13 C 0.12 -0.30 4.29 -67.12 -0.29 -0.59 16 14 H 0.11 -0.07 7.50 -51.93 -0.39 -0.45 16 15 C -0.14 0.28 7.45 -25.77 -0.19 0.09 16 16 C -0.13 0.54 3.65 -89.66 -0.33 0.21 16 17 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 18 C 0.12 -0.54 6.29 -4.04 -0.03 -0.57 16 19 N -0.29 0.17 3.44 -61.27 -0.21 -0.04 16 20 C -0.05 0.09 11.57 -17.05 -0.20 -0.11 16 21 C -0.05 -0.04 12.06 -17.73 -0.21 -0.25 16 22 N -0.27 -1.23 12.41 30.23 0.38 -0.85 16 23 N -0.08 -0.26 12.93 60.35 0.78 0.52 16 24 C -0.13 0.73 7.38 -25.92 -0.19 0.54 16 25 C -0.21 0.11 9.04 -39.43 -0.36 -0.25 16 26 C -0.08 0.05 8.66 -39.61 -0.34 -0.29 16 27 H 0.38 -0.51 8.70 45.56 0.40 -0.12 16 28 H 0.12 -0.11 7.96 -51.93 -0.41 -0.53 16 29 H -0.26 -0.21 7.11 56.52 0.40 0.20 16 30 H -0.26 -0.60 7.11 56.52 0.40 -0.20 16 31 H 0.13 0.01 8.06 -52.48 -0.42 -0.41 16 32 H 0.14 0.17 8.06 -52.49 -0.42 -0.26 16 33 H 0.10 -0.34 7.67 -51.93 -0.40 -0.74 16 34 H 0.10 -0.41 7.65 -51.93 -0.40 -0.80 16 35 H 0.40 -2.27 8.70 -40.82 -0.36 -2.62 16 36 H 0.10 -0.22 7.90 -51.93 -0.41 -0.63 16 37 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 38 H 0.11 -0.78 8.07 -51.93 -0.42 -1.20 16 39 H 0.10 -0.51 7.85 -51.93 -0.41 -0.92 16 40 H 0.19 -1.07 8.06 -52.49 -0.42 -1.49 16 41 H 0.19 -0.41 8.06 -52.49 -0.42 -0.83 16 42 H 0.08 -0.51 8.14 -51.93 -0.42 -0.93 16 43 H 0.10 -0.68 8.10 -51.93 -0.42 -1.10 16 44 H 0.13 -0.43 6.30 -52.49 -0.33 -0.76 16 45 H 0.13 -0.34 4.87 -52.48 -0.26 -0.60 16 LS Contribution 382.55 15.07 5.76 5.76 Total: 0.00 -13.08 382.55 -9.18 -22.27 By element: Atomic # 1 Polarization: -9.62 SS G_CDS: -5.96 Total: -15.57 kcal Atomic # 6 Polarization: 1.18 SS G_CDS: -3.53 Total: -2.36 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: 0.67 Total: 1.21 kcal Atomic # 8 Polarization: -4.42 SS G_CDS: -1.06 Total: -5.48 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.06 Total: -5.83 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -13.08 -9.18 -22.27 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567714_2989410.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.099 kcal (2) G-P(sol) polarization free energy of solvation -13.082 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.017 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.185 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.266 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.833 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds