Wall clock time and date at job start Sun Mar 7 2021 07:04:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86297 * 109.47606 * 2 1 4 4 C 1.50706 * 109.47147 * 120.00342 * 2 1 3 5 5 C 1.38243 * 119.96810 * 244.99770 * 4 2 1 6 6 C 1.38289 * 120.10565 * 179.97438 * 5 4 2 7 7 C 1.38119 * 120.05926 * 0.04692 * 6 5 4 8 8 C 1.38751 * 119.94495 * 359.97422 * 7 6 5 9 9 O 1.35904 * 120.05904 * 180.02562 * 8 7 6 10 10 C 1.42898 * 116.99431 * 0.02562 * 9 8 7 11 11 C 1.53007 * 109.46776 * 180.02562 * 10 9 8 12 12 C 1.50698 * 109.47040 * 179.97438 * 11 10 9 13 13 O 1.21285 * 120.00148 * 359.97438 * 12 11 10 14 14 N 1.34784 * 119.99866 * 180.02562 * 12 11 10 15 15 C 1.46496 * 119.99758 * 179.97438 * 14 12 11 16 16 H 1.09001 * 112.85032 * 336.19438 * 15 14 12 17 17 C 1.53782 * 113.68971 * 107.45966 * 15 14 12 18 18 C 1.53962 * 87.11063 * 89.19569 * 17 15 14 19 19 H 1.08993 * 113.61598 * 270.84305 * 18 17 15 20 20 C 1.52999 * 113.66529 * 139.88900 * 18 17 15 21 21 N 1.46494 * 109.47391 * 87.55384 * 20 18 17 22 22 C 1.35306 * 125.87288 * 124.71293 * 21 20 18 23 23 C 1.35351 * 106.17865 * 179.90714 * 22 21 20 24 24 N 1.33774 * 106.49326 * 0.35263 * 23 22 21 25 25 N 1.28632 * 108.88913 * 359.77219 * 24 23 22 26 26 C 1.53781 * 113.61266 * 204.99541 * 15 14 12 27 27 C 1.38163 * 119.97233 * 65.29304 * 4 2 1 28 28 H 0.96697 * 113.99570 * 299.99893 * 1 2 3 29 29 H 1.09009 * 109.46898 * 239.99714 * 2 1 3 30 30 H 1.48503 * 109.99942 * 300.00189 * 3 2 1 31 31 H 1.48497 * 110.00025 * 61.31860 * 3 2 1 32 32 H 1.07997 * 119.95071 * 359.97438 * 5 4 2 33 33 H 1.08000 * 119.97018 * 180.02562 * 6 5 4 34 34 H 1.08002 * 120.02940 * 179.97438 * 7 6 5 35 35 H 1.08993 * 109.47724 * 60.00315 * 10 9 8 36 36 H 1.09008 * 109.47126 * 299.99383 * 10 9 8 37 37 H 1.09006 * 109.46863 * 60.00019 * 11 10 9 38 38 H 1.09000 * 109.47210 * 299.99943 * 11 10 9 39 39 H 0.97001 * 119.99554 * 359.97438 * 14 12 11 40 40 H 1.08997 * 113.61668 * 203.67120 * 17 15 14 41 41 H 1.08994 * 113.61387 * 334.57855 * 17 15 14 42 42 H 1.09002 * 109.47053 * 207.55709 * 20 18 17 43 43 H 1.09004 * 109.47121 * 327.55345 * 20 18 17 44 44 H 1.08004 * 126.91280 * 0.02562 * 22 21 20 45 45 H 1.07995 * 126.75184 * 180.12210 * 23 22 21 46 46 H 1.09002 * 113.61445 * 25.35018 * 26 15 14 47 47 H 1.09002 * 113.61408 * 156.16749 * 26 15 14 48 48 H 1.08001 * 120.02926 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 2.6388 -0.0118 2.1909 6 6 3.1006 -0.6608 3.3213 7 6 2.8568 -2.0094 3.4930 8 6 2.1475 -2.7130 2.5302 9 8 1.9059 -4.0400 2.6970 10 6 2.4112 -4.6466 3.8881 11 6 2.0444 -6.1320 3.8989 12 6 2.5779 -6.7720 5.1547 13 8 3.1915 -6.1057 5.9613 14 7 2.3740 -8.0849 5.3809 15 6 2.8930 -8.7071 6.6014 16 1 3.7381 -8.1654 7.0263 17 6 1.8035 -9.0535 7.6299 18 6 1.6815 -10.4171 6.9255 19 1 0.9622 -10.4227 6.1066 20 6 1.4969 -11.5915 7.8885 21 7 0.0709 -11.7709 8.1722 22 6 -0.6343 -12.9127 7.9998 23 6 -1.9020 -12.6347 8.3842 24 7 -1.9119 -11.3510 8.7606 25 7 -0.7278 -10.8677 8.6232 26 6 3.1359 -10.2196 6.4664 27 6 1.6898 -2.0609 1.3947 28 1 -0.3932 0.4417 0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 1.5616 2.4679 -1.2085 31 1 1.5881 2.4585 1.2242 32 1 2.8311 1.0426 2.0582 33 1 3.6527 -0.1127 4.0705 34 1 3.2181 -2.5159 4.3758 35 1 1.9740 -4.1577 4.7586 36 1 3.4957 -4.5404 3.9180 37 1 2.4820 -6.6207 3.0284 38 1 0.9601 -6.2387 3.8687 39 1 1.8835 -8.6178 4.7356 40 1 2.1746 -9.1234 8.6524 41 1 0.9099 -8.4353 7.5442 42 1 1.8941 -12.4994 7.4347 43 1 2.0292 -11.3868 8.8175 44 1 -0.2605 -13.8566 7.6314 45 1 -2.7413 -13.3143 8.3833 46 1 3.3180 -10.5429 5.4415 47 1 3.8724 -10.6081 7.1698 48 1 1.1416 -2.6074 0.6416 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567714_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:27 Heat of formation + Delta-G solvation = 50.787210 kcal Electronic energy + Delta-G solvation = -30066.114816 eV Core-core repulsion = 25705.411099 eV Total energy + Delta-G solvation = -4360.703716 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -44.15412 -41.56599 -41.18591 -39.75498 -39.09906 -37.40343 -35.79073 -34.28618 -33.16750 -32.51318 -31.92817 -30.88390 -29.50729 -27.09148 -26.73859 -25.81644 -24.45589 -23.71517 -23.51183 -22.36121 -22.24134 -21.55301 -20.39695 -19.44088 -18.65017 -18.21155 -17.80770 -17.54053 -17.30133 -17.13387 -17.08947 -16.84203 -16.28337 -16.08196 -15.92098 -15.68760 -15.46061 -15.30636 -15.11466 -14.93729 -14.64519 -14.42402 -14.18029 -14.13687 -13.80559 -13.46593 -13.26682 -13.09237 -12.96841 -12.87885 -12.65213 -12.43570 -12.33314 -11.97971 -11.91715 -11.85628 -11.73201 -11.58403 -11.28926 -11.14019 -10.98197 -10.66795 -10.31377 -10.15755 -9.98082 -9.30528 -4.91038 0.17079 0.36522 0.70570 1.28521 1.43789 1.53042 1.61099 1.63835 1.65618 1.95587 2.43376 2.63006 3.29848 3.39990 3.44171 3.50193 3.59447 3.62222 3.64224 3.75595 3.81288 3.85455 3.92902 4.05376 4.06459 4.16518 4.20806 4.24514 4.32976 4.35441 4.36125 4.39499 4.52523 4.59705 4.62154 4.66258 4.72847 4.74099 4.83318 4.85060 4.95433 4.96282 5.03620 5.12035 5.23187 5.28320 5.35339 5.41378 5.52412 5.67586 5.73803 6.29213 6.38915 6.45501 7.09011 7.56104 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.087 4.087 3 Si 0.777 3.223 4 C -0.081 4.081 5 C -0.158 4.158 6 C -0.075 4.075 7 C -0.211 4.211 8 C 0.116 3.884 9 O -0.324 6.324 10 C 0.075 3.925 11 C -0.133 4.133 12 C 0.522 3.478 13 O -0.581 6.581 14 N -0.700 5.700 15 C 0.109 3.891 16 H 0.089 0.911 17 C -0.145 4.145 18 C -0.114 4.114 19 H 0.093 0.907 20 C 0.114 3.886 21 N -0.285 5.285 22 C -0.035 4.035 23 C -0.074 4.074 24 N -0.326 5.326 25 N -0.121 5.121 26 C -0.111 4.111 27 C -0.140 4.140 28 H 0.386 0.614 29 H 0.126 0.874 30 H -0.302 1.302 31 H -0.281 1.281 32 H 0.147 0.853 33 H 0.152 0.848 34 H 0.136 0.864 35 H 0.061 0.939 36 H 0.069 0.931 37 H 0.130 0.870 38 H 0.121 0.879 39 H 0.417 0.583 40 H 0.094 0.906 41 H 0.048 0.952 42 H 0.149 0.851 43 H 0.110 0.890 44 H 0.236 0.764 45 H 0.208 0.792 46 H 0.097 0.903 47 H 0.121 0.879 48 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.570 -7.849 -2.403 10.514 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.195 4.195 3 Si 0.682 3.318 4 C -0.082 4.082 5 C -0.175 4.175 6 C -0.093 4.093 7 C -0.229 4.229 8 C 0.071 3.929 9 O -0.239 6.239 10 C -0.001 4.001 11 C -0.173 4.173 12 C 0.310 3.690 13 O -0.461 6.461 14 N -0.351 5.351 15 C 0.003 3.997 16 H 0.107 0.893 17 C -0.183 4.183 18 C -0.134 4.134 19 H 0.111 0.889 20 C -0.005 4.005 21 N -0.079 5.079 22 C -0.187 4.187 23 C -0.232 4.232 24 N -0.191 5.191 25 N -0.100 5.100 26 C -0.149 4.149 27 C -0.159 4.159 28 H 0.235 0.765 29 H 0.143 0.857 30 H -0.230 1.230 31 H -0.207 1.207 32 H 0.164 0.836 33 H 0.170 0.830 34 H 0.154 0.846 35 H 0.080 0.920 36 H 0.087 0.913 37 H 0.148 0.852 38 H 0.139 0.861 39 H 0.254 0.746 40 H 0.113 0.887 41 H 0.067 0.933 42 H 0.167 0.833 43 H 0.128 0.872 44 H 0.252 0.748 45 H 0.225 0.775 46 H 0.116 0.884 47 H 0.140 0.860 48 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 6.679 -5.539 -2.027 8.911 hybrid contribution -1.497 -1.363 0.334 2.052 sum 5.182 -6.903 -1.693 8.796 Atomic orbital electron populations 1.86576 1.18476 1.80493 1.50106 1.25359 0.83492 1.12347 0.98341 0.93866 0.90230 0.71338 0.76369 1.20161 0.97931 0.93237 0.96835 1.21210 1.00813 1.00791 0.94725 1.21242 0.97252 0.93375 0.97452 1.21551 1.04177 0.96595 1.00601 1.19155 0.95837 0.82948 0.94989 1.85952 1.74739 1.20381 1.42786 1.22428 0.99354 0.92915 0.85386 1.21440 1.05136 0.93682 0.97040 1.20610 0.78599 0.82416 0.87389 1.90738 1.42903 1.63356 1.49086 1.45543 1.57250 1.09077 1.23279 1.21908 0.96967 0.95253 0.85554 0.89285 1.23508 0.98789 0.96749 0.99291 1.22848 0.99232 0.93256 0.98026 0.88891 1.22639 0.73116 1.02860 1.01931 1.47877 1.11950 1.07870 1.40230 1.24425 0.92449 0.94769 1.07009 1.24219 0.99663 0.94029 1.05265 1.75098 1.13143 1.11307 1.19541 1.78280 0.96037 1.17660 1.18056 1.23264 0.94872 0.92229 1.04520 1.20339 1.03941 0.94355 0.97260 0.76467 0.85656 1.22991 1.20739 0.83564 0.82995 0.84621 0.92031 0.91278 0.85191 0.86124 0.74597 0.88706 0.93314 0.83271 0.87219 0.74795 0.77507 0.88405 0.86036 0.85384 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.38 12.84 -148.98 -1.91 -4.29 16 2 C -0.09 -0.08 2.80 71.24 0.20 0.12 16 3 Si 0.78 -1.12 29.88 68.60 2.05 0.93 16 4 C -0.08 -0.20 5.35 -19.88 -0.11 -0.31 16 5 C -0.16 -0.07 8.67 22.28 0.19 0.12 16 6 C -0.08 -0.07 10.04 22.25 0.22 0.16 16 7 C -0.21 -0.79 9.04 22.36 0.20 -0.59 16 8 C 0.12 0.70 6.69 22.51 0.15 0.85 16 9 O -0.32 -1.73 10.14 -92.46 -0.94 -2.67 16 10 C 0.07 0.16 4.03 71.98 0.29 0.45 16 11 C -0.13 0.42 6.07 29.85 0.18 0.60 16 12 C 0.52 0.58 7.83 87.66 0.69 1.27 16 13 O -0.58 -5.89 15.58 -3.05 -0.05 -5.94 16 14 N -0.70 3.14 5.27 -440.03 -2.32 0.82 16 15 C 0.11 -0.46 4.32 45.52 0.20 -0.27 16 16 H 0.09 0.02 7.46 -2.39 -0.02 0.00 16 17 C -0.14 0.38 7.44 31.18 0.23 0.61 16 18 C -0.11 1.01 3.65 -10.20 -0.04 0.97 16 19 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 20 C 0.11 -1.16 6.29 86.38 0.54 -0.62 16 21 N -0.28 0.41 3.44 -347.74 -1.20 -0.78 16 22 C -0.04 0.16 11.57 83.49 0.97 1.12 16 23 C -0.07 -0.14 12.05 83.73 1.01 0.87 16 24 N -0.33 -3.57 12.41 -58.26 -0.72 -4.29 16 25 N -0.12 -1.01 12.93 37.02 0.48 -0.53 16 26 C -0.11 1.33 7.38 31.12 0.23 1.56 16 27 C -0.14 -0.77 9.63 22.37 0.22 -0.55 16 28 H 0.39 -0.47 8.70 -74.06 -0.64 -1.11 16 29 H 0.13 -0.08 7.96 -2.38 -0.02 -0.10 16 30 H -0.30 -1.83 7.11 99.48 0.71 -1.12 16 31 H -0.28 -0.56 7.01 99.48 0.70 0.14 16 32 H 0.15 -0.55 4.84 -2.91 -0.01 -0.56 16 33 H 0.15 -0.60 8.06 -2.91 -0.02 -0.63 16 34 H 0.14 0.32 6.30 -2.91 -0.02 0.30 16 35 H 0.06 0.25 7.62 -2.39 -0.02 0.23 16 36 H 0.07 0.19 7.62 -2.38 -0.02 0.17 16 37 H 0.13 -0.97 8.14 -2.38 -0.02 -0.99 16 38 H 0.12 -0.67 8.14 -2.39 -0.02 -0.69 16 39 H 0.42 -4.25 8.71 -92.71 -0.81 -5.06 16 40 H 0.09 -0.26 7.90 -2.39 -0.02 -0.28 16 41 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 42 H 0.15 -2.68 8.07 -2.39 -0.02 -2.70 16 43 H 0.11 -1.21 7.85 -2.38 -0.02 -1.22 16 44 H 0.24 -3.49 8.06 -2.91 -0.02 -3.51 16 45 H 0.21 -0.84 8.06 -2.91 -0.02 -0.87 16 46 H 0.10 -1.40 8.14 -2.39 -0.02 -1.41 16 47 H 0.12 -1.83 8.10 -2.39 -0.02 -1.85 16 48 H 0.13 0.73 8.06 -2.91 -0.02 0.70 16 Total: 0.00 -31.82 403.51 0.35 -31.47 By element: Atomic # 1 Polarization: -20.67 SS G_CDS: -0.42 Total: -21.09 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: 5.38 Total: 6.36 kcal Atomic # 7 Polarization: -1.02 SS G_CDS: -3.76 Total: -4.77 kcal Atomic # 8 Polarization: -10.00 SS G_CDS: -2.90 Total: -12.89 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: 2.05 Total: 0.93 kcal Total: -31.82 0.35 -31.47 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567714_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 82.258 kcal (2) G-P(sol) polarization free energy of solvation -31.821 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 50.438 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.349 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.471 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.787 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds