Wall clock time and date at job start Sun Mar 7 2021 07:04:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86307 * 109.47208 * 2 1 4 4 C 1.50696 * 109.47218 * 240.00088 * 2 1 3 5 5 C 1.38247 * 119.97404 * 120.02188 * 4 2 1 6 6 C 1.38286 * 120.11033 * 179.97438 * 5 4 2 7 7 C 1.38128 * 120.05647 * 359.67984 * 6 5 4 8 8 C 1.38757 * 119.94236 * 0.59604 * 7 6 5 9 9 O 1.35897 * 120.05589 * 179.70324 * 8 7 6 10 10 C 1.42908 * 117.00013 * 359.72444 * 9 8 7 11 11 C 1.52996 * 109.47066 * 180.02562 * 10 9 8 12 12 C 1.52999 * 109.46912 * 180.02562 * 11 10 9 13 13 C 1.50700 * 109.46979 * 179.97438 * 12 11 10 14 14 O 1.21283 * 120.00372 * 359.97438 * 13 12 11 15 15 N 1.34782 * 119.99816 * 180.02562 * 13 12 11 16 16 C 1.46504 * 119.99916 * 180.02562 * 15 13 12 17 17 H 1.09003 * 112.85023 * 336.19095 * 16 15 13 18 18 C 1.53784 * 113.61524 * 107.49881 * 16 15 13 19 19 C 1.53775 * 87.08070 * 89.11715 * 18 16 15 20 20 H 1.09000 * 113.68942 * 270.87475 * 19 18 16 21 21 C 1.52995 * 113.61526 * 139.98014 * 19 18 16 22 22 N 1.46506 * 109.47276 * 87.50108 * 21 19 18 23 23 C 1.35312 * 125.86709 * 124.71314 * 22 21 19 24 24 C 1.35352 * 106.17240 * 179.90780 * 23 22 21 25 25 N 1.33775 * 106.49643 * 0.35153 * 24 23 22 26 26 N 1.28629 * 108.88590 * 359.77853 * 25 24 23 27 27 C 1.53777 * 113.61480 * 204.99711 * 16 15 13 28 28 C 1.38172 * 119.96937 * 300.00058 * 4 2 1 29 29 H 0.96703 * 113.99884 * 300.00027 * 1 2 3 30 30 H 1.08998 * 109.47203 * 119.99939 * 2 1 3 31 31 H 1.48497 * 109.99956 * 178.67967 * 3 2 1 32 32 H 1.48498 * 109.99676 * 299.99916 * 3 2 1 33 33 H 1.07993 * 119.94347 * 359.97438 * 5 4 2 34 34 H 1.08003 * 119.97458 * 179.97438 * 6 5 4 35 35 H 1.08002 * 120.02787 * 180.32672 * 7 6 5 36 36 H 1.09000 * 109.47333 * 59.99742 * 10 9 8 37 37 H 1.09004 * 109.46771 * 300.00412 * 10 9 8 38 38 H 1.08987 * 109.47554 * 59.99700 * 11 10 9 39 39 H 1.09002 * 109.46638 * 299.99444 * 11 10 9 40 40 H 1.08999 * 109.47471 * 59.99869 * 12 11 10 41 41 H 1.09003 * 109.47399 * 299.99318 * 12 11 10 42 42 H 0.96997 * 119.99896 * 359.97438 * 15 13 12 43 43 H 1.08997 * 113.61347 * 334.56560 * 18 16 15 44 44 H 1.09003 * 113.61021 * 203.66840 * 18 16 15 45 45 H 1.08997 * 109.47344 * 327.49881 * 21 19 18 46 46 H 1.08998 * 109.47310 * 207.49907 * 21 19 18 47 47 H 1.07995 * 126.91362 * 0.02562 * 23 22 21 48 48 H 1.08000 * 126.75115 * 180.12638 * 24 23 22 49 49 H 1.08999 * 113.61434 * 156.33533 * 27 16 15 50 50 H 1.09006 * 113.69080 * 25.43880 * 27 16 15 51 51 H 1.07995 * 120.03043 * 0.03991 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7265 -0.0381 -2.1398 6 6 3.1895 -0.6874 -3.2696 7 6 2.8638 -2.0117 -3.4888 8 6 2.0611 -2.6870 -2.5805 9 8 1.7343 -3.9882 -2.7969 10 6 2.2470 -4.5972 -3.9837 11 6 1.7764 -6.0512 -4.0550 12 6 2.3259 -6.7033 -5.3253 13 6 1.8629 -8.1357 -5.3953 14 8 1.1627 -8.5904 -4.5155 15 7 2.2277 -8.9118 -6.4351 16 6 1.7771 -10.3042 -6.5034 17 1 1.5273 -10.7167 -5.5258 18 6 0.6993 -10.5512 -7.5721 19 6 1.8492 -10.8191 -8.5572 20 1 2.2051 -9.9248 -9.0688 21 6 1.5786 -11.9825 -9.5133 22 7 0.8688 -11.4880 -10.6957 23 6 1.2629 -11.6455 -11.9805 24 6 0.3207 -11.0403 -12.7408 25 7 -0.5876 -10.5418 -11.8946 26 7 -0.2339 -10.8240 -10.6905 27 6 2.6992 -11.2099 -7.3366 28 6 1.5972 -2.0332 -1.4485 29 1 -0.3933 0.4417 0.7651 30 1 1.7924 -0.5138 0.8900 31 1 3.5346 1.7703 0.0322 32 1 1.5615 2.4679 -1.2085 33 1 2.9865 0.9958 -1.9676 34 1 3.8102 -0.1600 -3.9788 35 1 3.2299 -2.5198 -4.3687 36 1 3.3365 -4.5679 -3.9656 37 1 1.8836 -4.0547 -4.8566 38 1 0.6871 -6.0801 -4.0734 39 1 2.1396 -6.5938 -3.1822 40 1 3.4154 -6.6745 -5.3065 41 1 1.9631 -6.1609 -6.1984 42 1 2.7880 -8.5483 -7.1385 43 1 0.1140 -9.6643 -7.8150 44 1 0.0808 -11.4267 -7.3742 45 1 0.9679 -12.7320 -9.0100 46 1 2.5247 -12.4298 -9.8182 47 1 2.1497 -12.1537 -12.3293 48 1 0.3070 -10.9701 -13.8184 49 1 2.6274 -12.2654 -7.0745 50 1 3.7288 -10.8560 -7.3902 51 1 0.9758 -2.5579 -0.7380 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567714_4549616.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:32 Heat of formation + Delta-G solvation = 49.376501 kcal Electronic energy + Delta-G solvation = -31628.132891 eV Core-core repulsion = 27111.830383 eV Total energy + Delta-G solvation = -4516.302508 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -44.17588 -41.49907 -41.20279 -39.76916 -39.04288 -37.31335 -35.85933 -34.94626 -34.10494 -32.56148 -31.95865 -31.27861 -29.85356 -28.33026 -26.97049 -26.78112 -24.99292 -23.72876 -23.59760 -23.46123 -22.40143 -21.82063 -21.57292 -20.54225 -18.95335 -18.74390 -18.39841 -18.19821 -17.53296 -17.43983 -17.32426 -17.12287 -16.91527 -16.42103 -16.08436 -15.85767 -15.72415 -15.55198 -15.36687 -15.24296 -14.84514 -14.68311 -14.53014 -14.25338 -14.11019 -13.94050 -13.71113 -13.52176 -13.35869 -13.27774 -13.14016 -12.69122 -12.57687 -12.49554 -12.45868 -12.23127 -12.01554 -11.96039 -11.81348 -11.70896 -11.66314 -11.51279 -11.03615 -10.94358 -10.39096 -10.33493 -10.17671 -9.84192 -9.21086 -4.95899 0.23085 0.42775 0.64063 1.27606 1.31213 1.54671 1.65188 1.67681 1.80992 1.98874 2.27624 2.66871 3.02330 3.17628 3.33928 3.38344 3.42813 3.49735 3.59634 3.74922 3.76335 3.80058 3.83067 3.84219 3.88323 3.98778 4.07935 4.08927 4.11442 4.15628 4.21869 4.25465 4.28608 4.30471 4.37651 4.40605 4.47514 4.53608 4.62187 4.65778 4.68168 4.76777 4.91759 4.94010 4.95198 4.99645 5.13845 5.21683 5.27933 5.37219 5.42691 5.46676 5.58523 5.69686 6.33591 6.42869 6.63501 7.12850 7.58843 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.074 4.074 3 Si 0.688 3.312 4 C -0.036 4.036 5 C -0.164 4.164 6 C -0.072 4.072 7 C -0.206 4.206 8 C 0.134 3.866 9 O -0.310 6.310 10 C 0.059 3.941 11 C -0.105 4.105 12 C -0.138 4.138 13 C 0.518 3.482 14 O -0.530 6.530 15 N -0.716 5.716 16 C 0.119 3.881 17 H 0.108 0.892 18 C -0.138 4.138 19 C -0.126 4.126 20 H 0.097 0.903 21 C 0.123 3.877 22 N -0.290 5.290 23 C -0.054 4.054 24 C -0.051 4.051 25 N -0.273 5.273 26 N -0.078 5.078 27 C -0.135 4.135 28 C -0.122 4.122 29 H 0.383 0.617 30 H 0.077 0.923 31 H -0.255 1.255 32 H -0.250 1.250 33 H 0.119 0.881 34 H 0.130 0.870 35 H 0.131 0.869 36 H 0.064 0.936 37 H 0.064 0.936 38 H 0.084 0.916 39 H 0.084 0.916 40 H 0.098 0.902 41 H 0.099 0.901 42 H 0.401 0.599 43 H 0.079 0.921 44 H 0.096 0.904 45 H 0.103 0.897 46 H 0.109 0.891 47 H 0.190 0.810 48 H 0.190 0.810 49 H 0.102 0.898 50 H 0.081 0.919 51 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.585 -1.324 -0.882 7.750 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.184 4.184 3 Si 0.589 3.411 4 C -0.036 4.036 5 C -0.182 4.182 6 C -0.090 4.090 7 C -0.224 4.224 8 C 0.089 3.911 9 O -0.223 6.223 10 C -0.016 4.016 11 C -0.143 4.143 12 C -0.178 4.178 13 C 0.305 3.695 14 O -0.405 6.405 15 N -0.368 5.368 16 C 0.013 3.987 17 H 0.126 0.874 18 C -0.177 4.177 19 C -0.145 4.145 20 H 0.116 0.884 21 C 0.002 3.998 22 N -0.085 5.085 23 C -0.205 4.205 24 C -0.209 4.209 25 N -0.139 5.139 26 N -0.059 5.059 27 C -0.173 4.173 28 C -0.140 4.140 29 H 0.231 0.769 30 H 0.095 0.905 31 H -0.180 1.180 32 H -0.175 1.175 33 H 0.137 0.863 34 H 0.148 0.852 35 H 0.149 0.851 36 H 0.082 0.918 37 H 0.083 0.917 38 H 0.103 0.897 39 H 0.103 0.897 40 H 0.117 0.883 41 H 0.117 0.883 42 H 0.235 0.765 43 H 0.098 0.902 44 H 0.114 0.886 45 H 0.121 0.879 46 H 0.127 0.873 47 H 0.207 0.793 48 H 0.207 0.793 49 H 0.121 0.879 50 H 0.099 0.901 51 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 6.423 -0.908 -0.207 6.490 hybrid contribution 1.566 -0.952 -1.678 2.485 sum 7.989 -1.860 -1.885 8.416 Atomic orbital electron populations 1.86504 1.17004 1.81855 1.49683 1.24732 0.85907 1.10495 0.97300 0.95362 0.80531 0.77825 0.87367 1.19133 0.96426 0.93187 0.94857 1.20769 1.02129 0.99337 0.95922 1.20850 0.97924 0.93816 0.96400 1.21292 1.03613 0.96326 1.01217 1.18995 0.94228 0.83509 0.94374 1.86085 1.70896 1.22259 1.43096 1.22831 0.98544 0.93933 0.86308 1.21228 1.03124 0.92247 0.97701 1.21531 1.03021 0.92811 1.00428 1.20582 0.79817 0.87975 0.81165 1.90760 1.36827 1.74737 1.38204 1.45681 1.53935 1.11765 1.25428 1.21812 0.95149 0.81596 1.00108 0.87352 1.23473 0.96209 1.03597 0.94403 1.22941 0.99210 0.97868 0.94448 0.88436 1.22243 0.97169 0.97291 0.83118 1.47552 1.17041 1.36301 1.07558 1.23746 1.04514 1.08345 0.83877 1.23689 0.93227 1.02241 1.01697 1.75179 1.24039 1.19349 0.95377 1.78356 0.99160 1.11044 1.17295 1.23343 0.98854 1.01127 0.94005 1.20246 1.02627 0.93903 0.97268 0.76924 0.90505 1.17994 1.17514 0.86337 0.85247 0.85101 0.91766 0.91744 0.89686 0.89738 0.88327 0.88306 0.76473 0.90222 0.88585 0.87851 0.87310 0.79289 0.79335 0.87917 0.90084 0.84574 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.61 12.74 -35.23 -0.45 -1.06 16 2 C -0.07 -0.06 2.81 36.00 0.10 0.04 16 3 Si 0.69 -0.37 29.79 -169.99 -5.06 -5.43 16 4 C -0.04 -0.12 5.42 -104.64 -0.57 -0.69 16 5 C -0.16 -0.51 8.67 -39.56 -0.34 -0.85 16 6 C -0.07 -0.15 10.04 -39.60 -0.40 -0.54 16 7 C -0.21 -0.41 9.04 -39.43 -0.36 -0.76 16 8 C 0.13 0.48 6.69 -39.22 -0.26 0.22 16 9 O -0.31 -1.04 10.14 -19.42 -0.20 -1.24 16 10 C 0.06 -0.01 4.74 37.16 0.18 0.17 16 11 C -0.11 -0.01 4.87 -26.73 -0.13 -0.14 16 12 C -0.14 0.33 5.70 -27.88 -0.16 0.17 16 13 C 0.52 0.25 7.83 -10.98 -0.09 0.17 16 14 O -0.53 -2.69 15.58 5.56 0.09 -2.61 16 15 N -0.72 1.47 5.26 -53.01 -0.28 1.19 16 16 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 17 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 18 C -0.14 0.21 7.43 -25.92 -0.19 0.01 16 19 C -0.13 0.46 3.64 -89.81 -0.33 0.13 16 20 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 21 C 0.12 -0.48 6.29 -4.04 -0.03 -0.50 16 22 N -0.29 0.05 3.44 -61.26 -0.21 -0.16 16 23 C -0.05 0.07 11.57 -17.05 -0.20 -0.13 16 24 C -0.05 -0.05 12.05 -17.73 -0.21 -0.27 16 25 N -0.27 -1.31 12.41 30.24 0.38 -0.94 16 26 N -0.08 -0.29 12.93 60.35 0.78 0.49 16 27 C -0.13 0.64 7.39 -25.92 -0.19 0.44 16 28 C -0.12 -0.49 9.55 -39.43 -0.38 -0.87 16 29 H 0.38 -1.58 8.74 45.56 0.40 -1.18 16 30 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 31 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 32 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 33 H 0.12 0.28 4.87 -52.49 -0.26 0.02 16 34 H 0.13 -0.05 8.06 -52.48 -0.42 -0.47 16 35 H 0.13 -0.07 6.30 -52.49 -0.33 -0.40 16 36 H 0.06 -0.11 7.65 -51.93 -0.40 -0.51 16 37 H 0.06 -0.08 7.67 -51.93 -0.40 -0.48 16 38 H 0.08 0.15 8.10 -51.94 -0.42 -0.27 16 39 H 0.08 0.12 8.10 -51.93 -0.42 -0.30 16 40 H 0.10 -0.45 8.14 -51.93 -0.42 -0.88 16 41 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 42 H 0.40 -1.86 8.70 -40.82 -0.36 -2.21 16 43 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 44 H 0.10 -0.16 7.90 -51.93 -0.41 -0.57 16 45 H 0.10 -0.46 7.84 -51.93 -0.41 -0.86 16 46 H 0.11 -0.72 8.07 -51.93 -0.42 -1.14 16 47 H 0.19 -1.00 8.06 -52.49 -0.42 -1.42 16 48 H 0.19 -0.36 8.06 -52.49 -0.42 -0.78 16 49 H 0.10 -0.59 8.10 -51.93 -0.42 -1.01 16 50 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 51 H 0.14 0.50 8.06 -52.49 -0.42 0.08 16 LS Contribution 424.97 15.07 6.40 6.40 Total: 0.00 -13.55 424.97 -10.03 -23.58 By element: Atomic # 1 Polarization: -8.67 SS G_CDS: -7.64 Total: -16.31 kcal Atomic # 6 Polarization: -0.07 SS G_CDS: -3.84 Total: -3.91 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: 0.67 Total: 0.58 kcal Atomic # 8 Polarization: -4.35 SS G_CDS: -0.56 Total: -4.91 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: -5.06 Total: -5.43 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -13.55 -10.03 -23.58 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567714_4549616.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.956 kcal (2) G-P(sol) polarization free energy of solvation -13.548 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.408 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.032 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.579 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.377 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds