Wall clock time and date at job start Sun Mar 7 2021 07:04:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.46935 * 2 1 4 4 C 1.50697 * 109.46911 * 240.00338 * 2 1 3 5 5 C 1.38247 * 119.94430 * 119.99949 * 4 2 1 6 6 C 1.38171 * 120.05316 * 180.02562 * 5 4 2 7 7 C 1.38708 * 119.94535 * 359.97438 * 6 5 4 8 8 O 1.35901 * 120.05202 * 179.97438 * 7 6 5 9 9 C 1.42899 * 117.00383 * 359.97438 * 8 7 6 10 10 C 1.50695 * 109.47400 * 180.02562 * 9 8 7 11 11 O 1.21282 * 119.99917 * 359.97438 * 10 9 8 12 12 N 1.34772 * 120.00305 * 180.02562 * 10 9 8 13 13 C 1.46506 * 120.00033 * 179.97438 * 12 10 9 14 14 H 1.08992 * 112.90684 * 336.24748 * 13 12 10 15 15 C 1.54049 * 113.61276 * 107.61836 * 13 12 10 16 16 C 1.53781 * 87.08031 * 89.07129 * 15 13 12 17 17 H 1.08999 * 113.61181 * 270.87794 * 16 15 13 18 18 C 1.52991 * 113.61611 * 139.97702 * 16 15 13 19 19 N 1.46508 * 109.47429 * 87.50116 * 18 16 15 20 20 C 1.35313 * 125.86567 * 125.00068 * 19 18 16 21 21 C 1.35354 * 106.17115 * 180.02562 * 20 19 18 22 22 N 1.33777 * 106.49620 * 359.97438 * 21 20 19 23 23 N 1.28636 * 108.88679 * 359.73913 * 22 21 20 24 24 C 1.53781 * 87.08070 * 25.42738 * 16 15 13 25 25 C 1.38754 * 119.89157 * 0.25475 * 7 6 5 26 26 N 1.47999 * 120.02834 * 179.72792 * 25 7 6 27 27 O 1.21805 * 119.99593 * 180.02562 * 26 25 7 28 28 O 1.21798 * 120.00135 * 359.97438 * 26 25 7 29 29 C 1.38121 * 119.93879 * 359.51445 * 25 7 6 30 30 H 0.96706 * 114.00451 * 59.99669 * 1 2 3 31 31 H 1.08996 * 109.47207 * 120.00263 * 2 1 3 32 32 H 1.48500 * 110.00099 * 60.00546 * 3 2 1 33 33 H 1.48504 * 109.99865 * 181.32003 * 3 2 1 34 34 H 1.07995 * 119.97422 * 359.97438 * 5 4 2 35 35 H 1.08004 * 120.02462 * 179.97438 * 6 5 4 36 36 H 1.08997 * 109.47308 * 59.99850 * 9 8 7 37 37 H 1.09001 * 109.46756 * 299.99985 * 9 8 7 38 38 H 0.97002 * 120.00078 * 359.97438 * 12 10 9 39 39 H 1.09005 * 113.62125 * 334.52173 * 15 13 12 40 40 H 1.09003 * 113.61268 * 203.61961 * 15 13 12 41 41 H 1.08997 * 109.47550 * 207.50008 * 18 16 15 42 42 H 1.09002 * 109.47334 * 327.50277 * 18 16 15 43 43 H 1.07996 * 126.91221 * 359.97438 * 20 19 18 44 44 H 1.08001 * 126.74859 * 180.02562 * 21 20 19 45 45 H 1.09002 * 113.61445 * 89.11830 * 24 16 15 46 46 H 1.09002 * 113.61408 * 219.93560 * 24 16 15 47 47 H 1.08005 * 119.96884 * 180.22772 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7260 -0.0373 -2.1397 6 6 3.1873 -0.6863 -3.2690 7 6 2.8529 -2.0142 -3.4897 8 8 3.3050 -2.6545 -4.5999 9 6 4.1201 -1.8988 -5.4980 10 6 4.5236 -2.7670 -6.6617 11 8 4.1504 -3.9197 -6.7163 12 7 5.3001 -2.2630 -7.6411 13 6 5.6929 -3.1073 -8.7722 14 1 5.6679 -4.1711 -8.5362 15 6 4.9773 -2.7480 -10.0882 16 6 6.1283 -1.7632 -10.3535 17 1 5.9548 -0.7683 -9.9435 18 6 6.5862 -1.7344 -11.8130 19 7 5.7758 -0.7692 -12.5601 20 6 6.2497 0.2672 -13.2897 21 6 5.1653 0.8932 -13.8038 22 7 4.0954 0.2176 -13.3698 23 7 4.4912 -0.7650 -12.6401 24 6 6.9965 -2.6577 -9.4530 25 6 2.0512 -2.6861 -2.5780 26 7 1.6875 -4.1013 -2.8135 27 8 0.9833 -4.6904 -2.0131 28 8 2.0916 -4.6765 -3.8082 29 6 1.5965 -2.0343 -1.4483 30 1 -0.3934 0.4418 -0.7650 31 1 1.7923 -0.5139 0.8899 32 1 1.5615 2.4679 1.2085 33 1 3.5345 1.7703 -0.0321 34 1 2.9857 0.9967 -1.9677 35 1 3.8078 -0.1599 -3.9792 36 1 5.0121 -1.5530 -4.9756 37 1 3.5575 -1.0399 -5.8639 38 1 5.5990 -1.3412 -7.5973 39 1 4.0123 -2.2626 -9.9422 40 1 4.9344 -3.5717 -10.8008 41 1 7.6349 -1.4411 -11.8591 42 1 6.4665 -2.7254 -12.2510 43 1 7.2847 0.5404 -13.4323 44 1 5.1642 1.7659 -14.4401 45 1 7.5057 -3.4567 -9.9919 46 1 7.6627 -2.0995 -8.7951 47 1 0.9755 -2.5579 -0.7365 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567714_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:04:54 Heat of formation + Delta-G solvation = 63.277257 kcal Electronic energy + Delta-G solvation = -35131.526569 eV Core-core repulsion = 30095.885645 eV Total energy + Delta-G solvation = -5035.640924 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.146 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -44.12479 -43.31438 -41.85370 -41.20154 -39.94573 -39.10224 -37.61219 -37.37808 -35.77287 -34.26737 -33.48138 -32.26076 -31.89925 -30.36304 -29.04660 -27.84362 -26.71738 -26.59080 -24.90208 -24.04891 -23.48377 -22.88738 -22.31032 -22.03689 -20.60188 -20.37742 -19.79601 -19.17189 -18.75707 -18.66010 -18.32551 -18.10970 -17.62455 -17.39833 -17.12327 -16.87185 -16.36261 -16.14621 -15.95205 -15.84604 -15.68656 -15.47479 -15.23681 -15.11796 -14.85031 -14.72850 -14.06456 -14.02624 -13.83638 -13.71778 -13.44999 -13.24784 -13.05295 -12.72617 -12.62547 -12.40517 -12.32032 -12.29309 -12.26378 -12.20907 -11.95660 -11.88725 -11.70445 -11.27452 -11.08553 -10.95831 -10.85809 -10.57641 -10.28430 -10.17261 -9.81061 -5.00245 -1.33499 -0.26399 0.13657 0.33446 0.73630 1.17149 1.26169 1.40063 1.55588 1.62879 1.66877 2.00824 2.03709 2.27962 3.09920 3.21713 3.32286 3.37118 3.45385 3.48990 3.57572 3.62753 3.67270 3.69383 3.77547 3.78627 3.88487 3.98637 4.08620 4.19275 4.27107 4.34218 4.35724 4.39105 4.42116 4.49066 4.61148 4.66825 4.76608 4.81895 4.83436 4.87675 4.98575 5.05392 5.05873 5.12567 5.17140 5.31295 5.51587 5.73466 5.76611 6.39214 6.40320 6.71967 7.11613 7.59291 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.083 4.083 3 Si 0.799 3.201 4 C -0.150 4.150 5 C -0.005 4.005 6 C -0.189 4.189 7 C 0.193 3.807 8 O -0.292 6.292 9 C 0.025 3.975 10 C 0.509 3.491 11 O -0.564 6.564 12 N -0.691 5.691 13 C 0.109 3.891 14 H 0.082 0.918 15 C -0.146 4.146 16 C -0.110 4.110 17 H 0.100 0.900 18 C 0.113 3.887 19 N -0.285 5.285 20 C -0.034 4.034 21 C -0.074 4.074 22 N -0.325 5.325 23 N -0.121 5.121 24 C -0.109 4.109 25 C -0.104 4.104 26 N 0.034 4.966 27 O -0.202 6.202 28 O -0.174 6.174 29 C -0.003 4.003 30 H 0.398 0.602 31 H 0.110 0.890 32 H -0.306 1.306 33 H -0.262 1.262 34 H 0.189 0.811 35 H 0.206 0.794 36 H 0.146 0.854 37 H 0.142 0.858 38 H 0.421 0.579 39 H 0.050 0.950 40 H 0.090 0.910 41 H 0.150 0.850 42 H 0.106 0.894 43 H 0.236 0.764 44 H 0.208 0.792 45 H 0.118 0.882 46 H 0.103 0.897 47 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.946 14.477 -2.764 19.617 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.191 4.191 3 Si 0.702 3.298 4 C -0.151 4.151 5 C -0.022 4.022 6 C -0.207 4.207 7 C 0.143 3.857 8 O -0.202 6.202 9 C -0.052 4.052 10 C 0.295 3.705 11 O -0.441 6.441 12 N -0.346 5.346 13 C 0.004 3.996 14 H 0.100 0.900 15 C -0.185 4.185 16 C -0.130 4.130 17 H 0.119 0.881 18 C -0.006 4.006 19 N -0.079 5.079 20 C -0.186 4.186 21 C -0.232 4.232 22 N -0.191 5.191 23 N -0.100 5.100 24 C -0.147 4.147 25 C -0.189 4.189 26 N 0.544 4.456 27 O -0.410 6.410 28 O -0.388 6.388 29 C -0.022 4.022 30 H 0.248 0.752 31 H 0.128 0.872 32 H -0.234 1.234 33 H -0.188 1.188 34 H 0.206 0.794 35 H 0.223 0.777 36 H 0.164 0.836 37 H 0.160 0.840 38 H 0.260 0.740 39 H 0.069 0.931 40 H 0.109 0.891 41 H 0.168 0.832 42 H 0.124 0.876 43 H 0.252 0.748 44 H 0.225 0.775 45 H 0.136 0.864 46 H 0.121 0.879 47 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 12.060 13.596 -1.350 18.224 hybrid contribution 0.353 -0.881 -0.113 0.956 sum 12.412 12.715 -1.463 17.829 Atomic orbital electron populations 1.86530 1.17261 1.82217 1.50627 1.25486 0.85471 1.12097 0.96004 0.93790 0.77992 0.72548 0.85476 1.20467 1.02068 0.92632 0.99952 1.21726 0.89446 1.01183 0.89837 1.21811 1.06117 0.90425 1.02339 1.18973 0.89670 0.92118 0.84950 1.86471 1.63758 1.39732 1.30251 1.23112 0.98254 0.94415 0.89405 1.20527 0.78421 0.87657 0.83903 1.90854 1.54646 1.20278 1.78362 1.45287 1.51550 1.16422 1.21325 1.21945 0.97180 0.95513 0.85006 0.89961 1.23532 0.98089 0.99565 0.97307 1.22815 0.97179 0.99675 0.93283 0.88140 1.22639 0.95573 0.91958 0.90480 1.47876 1.05787 1.21561 1.32687 1.24417 1.03765 0.91380 0.99021 1.24220 0.88372 1.04552 1.06038 1.75108 1.28985 1.03892 1.11068 1.78293 0.94456 1.18320 1.18978 1.23258 0.94712 0.99731 0.97013 1.20865 1.13316 0.81625 1.03139 1.43907 0.98252 1.03990 0.99455 1.94504 1.35788 1.68358 1.42342 1.94679 1.56569 1.69302 1.18239 1.20845 0.94174 0.94804 0.92425 0.75195 0.87245 1.23404 1.18840 0.79416 0.77702 0.83609 0.84027 0.74037 0.93075 0.89118 0.83176 0.87579 0.74811 0.77532 0.86385 0.87870 0.83232 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.81 12.77 -148.98 -1.90 -0.09 16 2 C -0.08 0.50 2.82 71.24 0.20 0.70 16 3 Si 0.80 -8.16 29.78 68.60 2.04 -6.11 16 4 C -0.15 0.83 5.39 -19.85 -0.11 0.72 16 5 C 0.00 0.05 8.66 22.26 0.19 0.25 16 6 C -0.19 2.04 9.04 22.37 0.20 2.24 16 7 C 0.19 0.15 6.67 22.51 0.15 0.30 16 8 O -0.29 -1.38 7.68 -63.42 -0.49 -1.87 16 9 C 0.02 -0.18 5.22 71.23 0.37 0.19 16 10 C 0.51 0.49 7.91 87.66 0.69 1.18 16 11 O -0.56 -8.52 16.10 16.00 0.26 -8.26 16 12 N -0.69 4.86 5.26 -439.60 -2.31 2.55 16 13 C 0.11 -0.54 4.34 45.61 0.20 -0.34 16 14 H 0.08 0.12 7.47 -2.39 -0.02 0.10 16 15 C -0.15 0.50 7.44 31.21 0.23 0.73 16 16 C -0.11 1.19 3.64 -10.27 -0.04 1.16 16 17 H 0.10 -1.09 8.14 -2.39 -0.02 -1.11 16 18 C 0.11 -1.30 6.29 86.37 0.54 -0.76 16 19 N -0.28 0.85 3.44 -347.73 -1.20 -0.35 16 20 C -0.03 0.21 11.57 83.49 0.97 1.18 16 21 C -0.07 -0.02 12.05 83.73 1.01 0.99 16 22 N -0.33 -3.08 12.41 -58.25 -0.72 -3.80 16 23 N -0.12 -0.84 12.94 37.02 0.48 -0.36 16 24 C -0.11 1.47 7.38 31.12 0.23 1.70 16 25 C -0.10 -0.77 6.87 36.47 0.25 -0.52 16 26 N 0.03 0.59 4.45 -46.25 -0.21 0.38 16 27 O -0.20 -3.90 18.45 18.88 0.35 -3.55 16 28 O -0.17 -3.88 17.24 25.61 0.44 -3.44 16 29 C 0.00 -0.01 9.12 22.25 0.20 0.20 16 30 H 0.40 -4.71 8.70 -74.05 -0.64 -5.35 16 31 H 0.11 -0.45 7.96 -2.39 -0.02 -0.47 16 32 H -0.31 0.11 7.11 99.48 0.71 0.82 16 33 H -0.26 2.21 7.11 99.48 0.71 2.92 16 34 H 0.19 -3.66 4.87 -2.91 -0.01 -3.68 16 35 H 0.21 -4.30 6.30 -2.91 -0.02 -4.32 16 36 H 0.15 -2.42 7.66 -2.39 -0.02 -2.43 16 37 H 0.14 -2.20 7.66 -2.39 -0.02 -2.22 16 38 H 0.42 -6.53 8.70 -92.71 -0.81 -7.34 16 39 H 0.05 0.13 8.14 -2.38 -0.02 0.11 16 40 H 0.09 -0.22 7.90 -2.39 -0.02 -0.24 16 41 H 0.15 -2.92 8.07 -2.39 -0.02 -2.94 16 42 H 0.11 -1.22 7.84 -2.39 -0.02 -1.24 16 43 H 0.24 -3.85 8.06 -2.91 -0.02 -3.87 16 44 H 0.21 -1.15 8.06 -2.91 -0.02 -1.17 16 45 H 0.12 -1.84 8.10 -2.39 -0.02 -1.86 16 46 H 0.10 -1.74 8.14 -2.39 -0.02 -1.76 16 47 H 0.15 0.65 7.61 -2.91 -0.02 0.62 16 Total: 0.00 -52.12 408.53 1.69 -50.43 By element: Atomic # 1 Polarization: -35.09 SS G_CDS: -0.35 Total: -35.43 kcal Atomic # 6 Polarization: 4.61 SS G_CDS: 5.30 Total: 9.91 kcal Atomic # 7 Polarization: 2.39 SS G_CDS: -3.96 Total: -1.57 kcal Atomic # 8 Polarization: -15.87 SS G_CDS: -1.34 Total: -17.21 kcal Atomic # 14 Polarization: -8.16 SS G_CDS: 2.04 Total: -6.11 kcal Total: -52.12 1.69 -50.43 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567714_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.703 kcal (2) G-P(sol) polarization free energy of solvation -52.119 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.694 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -50.425 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.277 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.56 seconds